BDGP Sequence Production Resources |
Search the DGRC for MIP04978
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 49 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18808-RA |
Protein status: | MIP04978.pep: gold |
Sequenced Size: | 1336 |
1336 bp assembled on 2009-04-07
GenBank Submission: BT081997.1
> MIP04978.complete CCCAGCTACACCGTTCTATTGGATGAAAATCAGCTGTACACAATGTTGGC GCTCCTCCGGCCAGCACTGTGGCTGGGAAGCTGCCTTCGTGGCTATCACA TGCATGCCGCCTCTACGCAGCAGCGGGGCGACACGTCCTTGGTTCTGGTG GATGAGGCCCGCCGCTTTATCCAGGACTGCCTGCTACGGGTTGGAGTTTC CCCCTCCAAGGTGCGCTGCATCAGCGAGTTCCTGGTTGTGGCGGACTATC GAGGAAACTACGGAAGCGGGCTGAATCGCCTGGATTACTATCTCAGTGAT CTGCAGAGCGGGCATGCCAAGGTGGGCGCAGAGCCTTCAATAATCAGTGA AACGGTGTCCACCGCCCATGTAAATGGCAATTCCGCCTTGGGTGTGTTTG TGGGAAACTTTTGTATGGATTTGGCGGTGAAGAAAGCTGAAGACTCTGGC ATCGGTTTCGTAGTGGCCCAGCAATCTCACGACATTGGCATGGCCAGCTG GTTTACATTTCGCGCTGCCGGCAAGGGATTAGCCGGAATCGTGATGTCCA ATTCGGCTCCAACGATGATGGGTCCCAACTCAAAGTCTGCCAGCATTGGC TCCAACTGCTTTGCCTTCTGCGTAAAGGGTGAGGAGTACCATTTTGTTCT AGACATGGCGACCAGCGTGAAGGATATTGGAGCCGTGGAATGGGCTTGGG CCAACGATGAGTATATACCGCATGGCTGGGCGGCCAACGAGGGTGGCTTA TCCACCTGTTTTCCCAGCTTGGCCTTAAGGACACCATTACTATTTCCTGC TGGTGGTCACAAAGGCTATTGCCTGTCAGCCGTGATAGATATTCTATGTG GAGTGCTCTCTGGTGCCCAATATGCCACTCATATAACCATGGACCAGAAC CAACCATCGAACTTGGGTCAAGTATTTATTGCTCTCGATCCAGAATTTTT CTTGCCCAACTTTATGGAACGTTTCGATGACTTTTGTGGTCGCATCCAGA ATAGCCAGCCGGCGGACGATTCAGAGCCCATCCGGCTACCTGGCGAACTG GAGAGGATGCACATGAACTACGTGGAAGATTTGCGGGCTTTAGCCTATCC GAATAGTCTTTTGACCAAGTACAAAGAAGTGGCGGAAAGGCTGTGCGTAA AACCCATCGAGCTGGCTTTTGATAGGTGTCAGTCCAGGAAGAGCTTTTAG TCTCATACTATAAATACTGTAAATGTAGTTCACAAAAAATATTATAGTTA ATAGAAAAATGTTAAGCTTATTAAGTGAAGTATAAATAGCTACTCCTATG CAGGAATGGTATAAGGACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18808-RA | 1269 | CG18808-RA | 37..1269 | 1..1233 | 6165 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4805448..4806765 | 1318..1 | 6455 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4806051..4807370 | 1320..1 | 6600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4806051..4807370 | 1320..1 | 6600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1234..1294 | 1210..1270 | 116 | 65.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4805448..4806765 | 1..1318 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 1..1158 | 43..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 1..1158 | 43..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 1..1158 | 43..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 1..1158 | 43..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 37..1269 | 1..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 37..1269 | 1..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 37..1354 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18808-RA | 37..1354 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4806053..4807370 | 1..1318 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4806053..4807370 | 1..1318 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4806053..4807370 | 1..1318 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4806053..4807370 | 1..1318 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4806053..4807370 | 1..1318 | 100 | Minus |
Translation from 0 to 1199
> MIP04978.pep PSYTVLLDENQLYTMLALLRPALWLGSCLRGYHMHAASTQQRGDTSLVLV DEARRFIQDCLLRVGVSPSKVRCISEFLVVADYRGNYGSGLNRLDYYLSD LQSGHAKVGAEPSIISETVSTAHVNGNSALGVFVGNFCMDLAVKKAEDSG IGFVVAQQSHDIGMASWFTFRAAGKGLAGIVMSNSAPTMMGPNSKSASIG SNCFAFCVKGEEYHFVLDMATSVKDIGAVEWAWANDEYIPHGWAANEGGL STCFPSLALRTPLLFPAGGHKGYCLSAVIDILCGVLSGAQYATHITMDQN QPSNLGQVFIALDPEFFLPNFMERFDDFCGRIQNSQPADDSEPIRLPGEL ERMHMNYVEDLRALAYPNSLLTKYKEVAERLCVKPIELAFDRCQSRKSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24712-PA | 398 | GF24712-PA | 29..398 | 30..399 | 1457 | 70.3 | Plus |
Dana\GF24300-PA | 440 | GF24300-PA | 86..438 | 47..388 | 667 | 39.7 | Plus |
Dana\GF17333-PA | 492 | GF17333-PA | 118..469 | 45..388 | 483 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14160-PA | 385 | GG14160-PA | 1..385 | 15..399 | 1934 | 92.5 | Plus |
Dere\GG16165-PA | 449 | GG16165-PA | 96..448 | 47..388 | 652 | 38.8 | Plus |
Dere\GG15586-PA | 469 | GG15586-PA | 94..456 | 38..392 | 504 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12133-PA | 362 | GH12133-PA | 1..361 | 34..388 | 688 | 39.1 | Plus |
Dgri\GH14969-PA | 436 | GH14969-PA | 74..435 | 33..388 | 688 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18808-PA | 385 | CG18808-PA | 1..385 | 15..399 | 2030 | 100 | Plus |
CG10512-PB | 381 | CG10512-PB | 20..378 | 39..386 | 625 | 38.8 | Plus |
CG10512-PA | 446 | CG10512-PA | 85..443 | 39..386 | 625 | 38.8 | Plus |
CG10512-PD | 361 | CG10512-PD | 8..358 | 47..386 | 624 | 39.4 | Plus |
CG10512-PC | 361 | CG10512-PC | 8..358 | 47..386 | 624 | 39.4 | Plus |
CG17199-PA | 461 | CG17199-PA | 93..444 | 45..388 | 501 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12569-PA | 399 | GI12569-PA | 39..389 | 45..390 | 1076 | 57.5 | Plus |
Dmoj\GI13129-PA | 433 | GI13129-PA | 66..432 | 29..388 | 685 | 39.4 | Plus |
Dmoj\GI10050-PA | 450 | GI10050-PA | 78..445 | 30..388 | 460 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17929-PA | 384 | GL17929-PA | 1..379 | 15..388 | 1099 | 56.2 | Plus |
Dper\GL24667-PA | 361 | GL24667-PA | 8..361 | 47..391 | 659 | 39.4 | Plus |
Dper\GL12513-PA | 468 | GL12513-PA | 115..465 | 46..388 | 536 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15088-PA | 384 | GA15088-PA | 1..379 | 15..388 | 1100 | 55.9 | Plus |
Dpse\GA10363-PA | 440 | GA10363-PA | 73..440 | 29..391 | 663 | 38.8 | Plus |
Dpse\GA14384-PA | 468 | GA14384-PA | 115..465 | 46..388 | 542 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13948-PA | 385 | GM13948-PA | 1..385 | 15..399 | 1998 | 96.6 | Plus |
Dsec\GM22347-PA | 446 | GM22347-PA | 93..445 | 47..388 | 644 | 38.6 | Plus |
Dsec\GM23206-PA | 461 | GM23206-PA | 89..453 | 38..394 | 510 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13232-PA | 385 | GD13232-PA | 1..385 | 15..399 | 2000 | 96.6 | Plus |
Dsim\GD20077-PA | 455 | GD20077-PA | 93..451 | 42..392 | 500 | 32.3 | Plus |
Dsim\GD17648-PA | 286 | GD17648-PA | 28..248 | 47..266 | 409 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15473-PA | 400 | GJ15473-PA | 16..390 | 24..390 | 1125 | 56.5 | Plus |
Dvir\GJ13877-PA | 363 | GJ13877-PA | 10..362 | 47..388 | 690 | 39.9 | Plus |
Dvir\GJ23783-PA | 520 | GJ23783-PA | 166..513 | 47..386 | 538 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19287-PA | 388 | GK19287-PA | 9..385 | 26..398 | 1235 | 60.6 | Plus |
Dwil\GK16815-PA | 362 | GK16815-PA | 9..361 | 47..388 | 659 | 39.2 | Plus |
Dwil\GK22789-PA | 502 | GK22789-PA | 138..494 | 42..387 | 524 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20586-PA | 385 | GE20586-PA | 1..385 | 15..399 | 1921 | 91.4 | Plus |
Dyak\GE23055-PA | 440 | GE23055-PA | 87..439 | 47..388 | 652 | 38.5 | Plus |
Dyak\GE19733-PA | 440 | GE19733-PA | 87..439 | 47..388 | 650 | 38.5 | Plus |
Dyak\GE11137-PA | 460 | GE11137-PA | 99..457 | 38..388 | 504 | 32.3 | Plus |
Translation from 0 to 1199
> MIP04978.hyp PSYTVLLDENQLYTMLALLRPALWLGSCLRGYHMHAASTQQRGDTSLVLV DEARRFIQDCLLRVGVSPSKVRCISEFLVVADYRGNYGSGLNRLDYYLSD LQSGHAKVGAEPSIISETVSTAHVNGNSALGVFVGNFCMDLAVKKAEDSG IGFVVAQQSHDIGMASWFTFRAAGKGLAGIVMSNSAPTMMGPNSKSASIG SNCFAFCVKGEEYHFVLDMATSVKDIGAVEWAWANDEYIPHGWAANEGGL STCFPSLALRTPLLFPAGGHKGYCLSAVIDILCGVLSGAQYATHITMDQN QPSNLGQVFIALDPEFFLPNFMERFDDFCGRIQNSQPADDSEPIRLPGEL ERMHMNYVEDLRALAYPNSLLTKYKEVAERLCVKPIELAFDRCQSRKSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18808-PA | 385 | CG18808-PA | 1..385 | 15..399 | 2030 | 100 | Plus |
CG10512-PB | 381 | CG10512-PB | 20..378 | 39..386 | 625 | 38.8 | Plus |
CG10512-PA | 446 | CG10512-PA | 85..443 | 39..386 | 625 | 38.8 | Plus |
CG10512-PD | 361 | CG10512-PD | 8..358 | 47..386 | 624 | 39.4 | Plus |
CG10512-PC | 361 | CG10512-PC | 8..358 | 47..386 | 624 | 39.4 | Plus |