Clone MIP05037 Report

Search the DGRC for MIP05037

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:50
Well:37
Vector:pOT2
Associated Gene/TranscriptCG42675-RE
Protein status:MIP05037.pep: gold
Sequenced Size:1492

Clone Sequence Records

MIP05037.complete Sequence

1492 bp assembled on 2009-10-12

GenBank Submission: BT100016.1

> MIP05037.complete
CTAAACAAAAGGACAGCCAGCTAGGATTTCTCGAGTGTCCGATATACACA
AAGGACTTGCATTTTTTGCCCGGACAACTTGCCAGGTGGCCATGGCTGAG
TTCGAAGGCCACTACCAGGACACCAGAGGCAGAAGACAAGCGCACTAGTT
GAAGGGACAACAGCGGGAAGAGCATGCCCACAACCACGTCCACATCCACA
CCCACACCCGCACCCACACCAATATCCCTGCCCGCGACCCGTTCCCGGGC
ACAGGATAGGGTTTCTTTCGCCCAGGCGGGTCGGGTGGCTAGGAGCTTTA
TGTACTGGCGGCACATGCGTTTCCAGCAGCGCACGCAACAGGAGCAGGAG
GTGCGTAGGCGGGAGCTGATGAGCACGAAGTCAAGTGCCGAGAACCTGGC
CACTGGAGCACCCAGTGCCGCCACCACCAGGTTGATCGGGAATGGGAAAG
TGCGCCAGATGTTCGACGAGCGCCGCCGCGGGGCGGGCATTGATCGCAGC
AATCCCCTCAAGCCGATCGGCACTCTGCCCTCGCCACCCGCCCAAACAAA
ATCTCGCCCGCAGCCCCCAATGCAGCGTCTCGTCAAGGGCGTGGCCGACT
TGACCATGCGGGATGCACCAAATGCACCAGGCAGGAGGATCACTAGTGAC
AGCAATAACAATAAGTTCGCCACGCCCCGCGGGACTTTGAATCGCAACCT
TAAGCCCGTGGTCACCCGCAAGACACCGCCGGCCCAGGAGACCACGCTCC
ACCAACGTTCTCCCGCGCCACAACGCAGTCCCAAGATTCAGGCGACCCAA
CGAGTAAGTGGAGGAACCGGTGCTGCCCCGACAGCCGGTCGTCTTTCGCC
ACCATTTGTTCGACGGGCGGAACCCAAATCACCAGTTAAAAAGGTCAACA
TGGACACAACGACTGCAATCCCAGAGGGCACCGCTTTATGCCGCTACTGC
GGACGCCACTTCAACACGGATCGTCTGGCGAAGCACGAGGAGGTGTGCCA
GCGCATGCTGACCACCAAACGCAAGATATTCGATGCCTCCAAGCAGCGGA
TCGAGGGCACCGAGGCCGCGGCGTTCAATATGAAGTCGAAGGGCAATCGC
AACCGTTCAACTTACAGTAGTGCTGCCCAGCAGAAGGGTCTGACCACTGG
AGTGAAGAAGAACAACTGGCGTAAGAAGCACGAGGACTTCATTCAGTCGA
TTAGAGCGGCCAAGCAGGTGAAGGCGCACTTGGCGCGCGGCGGCAAGTTG
AGCGACCTGCCACCACCGCCACCTTCGGAGAATCCAGACTATGTCCAGTG
TCCCCACTGTGGTCGCCGATTCAACGAACAGGCTGCGGAGCGTCATATCC
CCAAGTGCGTTAACATGGTGCACAACAAGCCCCGTAACGGTCCGCCGGCC
AAGAGGCGTTGAGTGGTGATTGGGAATAGATATTCGCCCATTCTTTTACT
TGTGATAAAGAAGTTTTATGATTGAAAAAAAAAAAAAAAAAA

MIP05037.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG10999-RB 1773 CG10999-RB 602..1768 311..1477 5820 99.9 Plus
CG10999-RA 1724 CG10999-RA 553..1719 311..1477 5820 99.9 Plus
CG10999-RC 652 CG10999-RC 36..647 866..1477 3060 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1643895..1644467 902..1474 2865 100 Plus
chr3R 27901430 chr3R 1643163..1643715 315..867 2765 100 Plus
chr3R 27901430 chr3R 1642233..1642546 1..314 1570 100 Plus
chr3R 27901430 chr3R 1643798..1643835 866..903 190 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:04:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5818248..5818823 902..1477 2880 100 Plus
3R 32079331 3R 5817516..5818068 315..867 2765 100 Plus
3R 32079331 3R 5816586..5816899 1..314 1570 100 Plus
3R 32079331 3R 5818151..5818188 866..903 190 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 5559079..5559654 902..1477 2880 100 Plus
3R 31820162 3R 5558347..5558899 315..867 2765 100 Plus
3R 31820162 3R 5557417..5557730 1..314 1570 100 Plus
3R 31820162 3R 5558982..5559019 866..903 190 100 Plus
Blast to na_te.dros performed on 2019-03-15 16:40:16 has no hits.

MIP05037.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:41:10 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1642233..1642546 1..314 100 -> Plus
chr3R 1643163..1643714 315..866 100 -> Plus
chr3R 1643799..1643834 867..902 100 -> Plus
chr3R 1643896..1644467 903..1474 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:27 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG10999-RB 51..1152 311..1412 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:42:59 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1239 174..1412 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:20:37 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1239 174..1412 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:34 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1239 174..1412 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-12 10:19:10 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG10999-RB 602..1765 311..1474 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:42:59 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1474 1..1474 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:20:37 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1474 1..1474 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:34 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
CG42675-RE 1..1474 1..1474 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:41:10 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5816586..5816899 1..314 100 -> Plus
3R 5817516..5818067 315..866 100 -> Plus
3R 5818152..5818187 867..902 100 -> Plus
3R 5818249..5818820 903..1474 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:41:10 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5816586..5816899 1..314 100 -> Plus
3R 5817516..5818067 315..866 100 -> Plus
3R 5818152..5818187 867..902 100 -> Plus
3R 5818249..5818820 903..1474 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:41:10 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5816586..5816899 1..314 100 -> Plus
3R 5817516..5818067 315..866 100 -> Plus
3R 5818152..5818187 867..902 100 -> Plus
3R 5818249..5818820 903..1474 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:20:37 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1642308..1642621 1..314 100 -> Plus
arm_3R 1643238..1643789 315..866 100 -> Plus
arm_3R 1643874..1643909 867..902 100 -> Plus
arm_3R 1643971..1644542 903..1474 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:05 Download gff for MIP05037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5557417..5557730 1..314 100 -> Plus
3R 5558347..5558898 315..866 100 -> Plus
3R 5558983..5559018 867..902 100 -> Plus
3R 5559080..5559651 903..1474 100   Plus

MIP05037.pep Sequence

Translation from 173 to 1411

> MIP05037.pep
MPTTTSTSTPTPAPTPISLPATRSRAQDRVSFAQAGRVARSFMYWRHMRF
QQRTQQEQEVRRRELMSTKSSAENLATGAPSAATTRLIGNGKVRQMFDER
RRGAGIDRSNPLKPIGTLPSPPAQTKSRPQPPMQRLVKGVADLTMRDAPN
APGRRITSDSNNNKFATPRGTLNRNLKPVVTRKTPPAQETTLHQRSPAPQ
RSPKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDTTTAIP
EGTALCRYCGRHFNTDRLAKHEEVCQRMLTTKRKIFDASKQRIEGTEAAA
FNMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDFIQSIRAAKQVK
AHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFNEQAAERHIPKCVNMVH
NKPRNGPPAKRR*

MIP05037.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16356-PA 389 GF16356-PA 12..388 41..412 1250 69.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13059-PA 382 GG13059-PA 6..382 35..412 1663 87 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13179-PA 380 GH13179-PA 6..373 35..408 976 58 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG42675-PE 412 CG42675-PE 1..412 1..412 2164 100 Plus
CG42675-PF 383 CG42675-PF 6..383 35..412 1920 97.1 Plus
CG42675-PC 383 CG10999-PB 6..383 35..412 1920 97.1 Plus
CG42675-PB 383 CG10999-PA 6..383 35..412 1920 97.1 Plus
CG42675-PG 427 CG42675-PG 63..427 48..412 1918 100 Plus
CG42675-PD 187 CG10999-PC 6..187 231..412 978 99.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22365-PA 424 GI22365-PA 40..417 76..408 913 54.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24325-PA 466 GL24325-PA 108..460 48..407 1040 63.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26574-PA 380 GA26574-PA 19..374 48..407 1088 62.9 Plus
Dpse\GA26574-PB 423 GA26574-PB 66..417 48..407 1084 63.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10844-PA 383 GM10844-PA 6..383 35..412 1813 92.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19826-PA 455 GD19826-PA 91..455 48..412 1817 95.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24399-PA 385 GJ24399-PA 19..374 48..404 983 58.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22541-PA 461 GK22541-PA 93..456 48..408 924 58.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10169-PA 378 GE10169-PA 13..378 47..412 1671 88.3 Plus

MIP05037.hyp Sequence

Translation from 173 to 1411

> MIP05037.hyp
MPTTTSTSTPTPAPTPISLPATRSRAQDRVSFAQAGRVARSFMYWRHMRF
QQRTQQEQEVRRRELMSTKSSAENLATGAPSAATTRLIGNGKVRQMFDER
RRGAGIDRSNPLKPIGTLPSPPAQTKSRPQPPMQRLVKGVADLTMRDAPN
APGRRITSDSNNNKFATPRGTLNRNLKPVVTRKTPPAQETTLHQRSPAPQ
RSPKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDTTTAIP
EGTALCRYCGRHFNTDRLAKHEEVCQRMLTTKRKIFDASKQRIEGTEAAA
FNMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDFIQSIRAAKQVK
AHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFNEQAAERHIPKCVNMVH
NKPRNGPPAKRR*

MIP05037.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG42675-PE 412 CG42675-PE 1..412 1..412 2164 100 Plus
CG42675-PF 383 CG42675-PF 6..383 35..412 1920 97.1 Plus
CG42675-PC 383 CG10999-PB 6..383 35..412 1920 97.1 Plus
CG42675-PB 383 CG10999-PA 6..383 35..412 1920 97.1 Plus
CG42675-PG 427 CG42675-PG 63..427 48..412 1918 100 Plus