Clone MIP05081 Report

Search the DGRC for MIP05081

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:50
Well:81
Vector:pOT2
Associated Gene/TranscriptCG32281-RA
Protein status:MIP05081.pep: gold
Sequenced Size:1625

Clone Sequence Records

MIP05081.complete Sequence

1625 bp assembled on 2009-04-08

GenBank Submission: BT082011.1

> MIP05081.complete
CCGATCTTGAATTTTGGAATTAATAGAGGTATATATTTAAAGATTAATTG
ATATTTGGAGATCTGCAAGTCCTCTACAAGCTGCTCCAGCCTTCCATATC
AAAGGAGCCTGATTTGCGTGCTCCAAACTCAAGAAAACACCAGAATCTAG
GTCGCACGTGTTTGGATGTTTATAGTGTCCAGATTGAAGGATTTAACGAT
TATAACGAATCGTTTACGTCACTACTTTCGAAACATGGACGTCAAGGAGC
TGCAGCCTCCCAGCTCGGTGCGCGGAATGCAGGAGCTGCAAAGGGAACAG
TTCCGAAAGATCGTTCAAGTTCCGCGTTTACGGGTGCCCGAGTCTCAGGT
GCAACGTGTTATGCCGCTGGTCAAAAAGTTCCTGCTGAAAATGGAGCACC
TGCATCCTGTCCGAGCTGTGGACCAATCTCGAGAGATCCTACTACATCCA
ACGCCTGTCAAAAACTGGGATTCCCTGCCAACAGAGGATCTGCAGAGGCA
GAAAGTCAATGCCGAGAACTTCTCCTTCGCCGACCTCGAGTTGAGGTATG
AAAATTGGAGCGCCAATGAAATCCTGAAAAGCGTGCTACCCACGGAGGAG
GAAGGTCTCACCTCCTACTCCCGCATAGGCCACATTGCCCACCTTAATCT
TCGTGATCATCTGCTGCCCTATAAGCAGCTCATCGGTCAGGTGCTCCGCG
ACAAGCTTCCCAATTGCCGCACGGTGGTTAACAAAGCATCCTCCATTGAC
AACACCTACCGCAACTTCCAGCTGGAGCTGATCTGTGGGGACCCCGATTA
CCAGGTGGAAACTAAGGAGAACGGAGTCCCCTTTGAGTTTGATTTCTCCA
AGGTGTACTGGAATCCCCGCCTCTCCACGGAGCACGAGAGAATTGTCAAA
ATGCTGAAATCGGACGATGTTCTCTATGATGTATTTGCTGGCGTGGGTCC
ATTCAGTATTCCTGCTGCCAAGAAGCGATGCCATGTCCTGGCCAATGACC
TGAACCCTGAGAGTTTTCGTTGGCTCCAGCATAATGCCAAGAGAAATAAG
TGCTTGCCCAATATAAAGATGAGCAATAAAGATGGTAGACAGTTTATCGT
CGAGGAGCTAAGGGAGGACCTGCTAAAGCGTCTATGTACCACGGATACTA
CTACCTATGGCATACATATTACAATGAATCTACCAGCAATGGCTGTAGAG
TTCCTGGACGCATTTCGTGGTCTCTACAGCGCAGATGAGCTAGCGCAGTT
ACCTACAAACGTGTGCTATCCCACTGTTCATGTTTACTCCTTTGCCAAGG
GTGAGAACACCAAGGAATTGGTGCGTCAACTGGTGGAGAGCAATTTGGGA
GCCAGCCTGGACGAAAACCTGCTCCAGGGAATAAATTTTGTACGAAATGT
TGCCCCCAACAAGGACATGTATAGAGTGTCCTTCAAGCTATCACTAAACA
TGCTAACCACTTTAAAGGAAGTGGAGGTCACGAGAAAACGTTATGCAGAG
GAGGAGCTGGAGGTCGCCACCAAAGTGAAATGTGTTTGATACAATAGATA
CAATAAAGCTGTGATTTCCAAACAATTAAAAAAAAAAAAAAAAAAAAAAA
AAATAAAAAAAAAAAAAAAAAAAAA

MIP05081.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-RA 1535 CG32281-RA 1..1535 39..1573 7645 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3168786..3170367 1..1582 7835 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:04:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3169337..3170918 1..1582 7880 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3169337..3170918 1..1582 7880 99.8 Plus
Blast to na_te.dros performed on 2019-03-15 22:59:53 has no hits.

MIP05081.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:00:55 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3168786..3170362 1..1577 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:09:03 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1374 166..1539 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:44:35 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1374 166..1539 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:25:26 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1374 166..1539 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:17:03 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1374 166..1539 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-08 12:26:20 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1535 39..1573 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:44:34 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1535 39..1573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:25:26 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1539 39..1577 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:17:03 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 1..1539 39..1577 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:00:55 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3169337..3170913 1..1577 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:00:55 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3169337..3170913 1..1577 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:00:55 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3169337..3170913 1..1577 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:25:26 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3169337..3170913 1..1577 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:19:42 Download gff for MIP05081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3169337..3170913 1..1577 99   Plus

MIP05081.hyp Sequence

Translation from 165 to 1538

> MIP05081.hyp
MFIVSRLKDLTIITNRLRHYFRNMDVKELQPPSSVRGMQELQREQFRKIV
QVPRLRVPESQVQRVMPLVKKFLLKMEHLHPVRAVDQSREILLHPTPVKN
WDSLPTEDLQRQKVNAENFSFADLELRYENWSANEILKSVLPTEEEGLTS
YSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRN
FQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSD
DVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNI
KMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAF
RGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVRQLVESNLGASLDE
NLLQGINFVRNVAPNKDMYRVSFKLSLNMLTTLKEVEVTRKRYAEEELEV
ATKVKCV*

MIP05081.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-PA 457 CG32281-PA 1..457 1..457 2373 100 Plus

MIP05081.pep Sequence

Translation from 165 to 1538

> MIP05081.pep
MFIVSRLKDLTIITNRLRHYFRNMDVKELQPPSSVRGMQELQREQFRKIV
QVPRLRVPESQVQRVMPLVKKFLLKMEHLHPVRAVDQSREILLHPTPVKN
WDSLPTEDLQRQKVNAENFSFADLELRYENWSANEILKSVLPTEEEGLTS
YSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRN
FQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSD
DVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNI
KMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAF
RGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVRQLVESNLGASLDE
NLLQGINFVRNVAPNKDMYRVSFKLSLNMLTTLKEVEVTRKRYAEEELEV
ATKVKCV*

MIP05081.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20072-PA 435 GF20072-PA 1..435 24..457 1863 78.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15106-PA 457 GG15106-PA 1..457 1..457 2293 93.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16197-PA 436 GH16197-PA 1..436 24..457 1705 74.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-PA 457 CG32281-PA 1..457 1..457 2373 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13347-PA 435 GI13347-PA 1..435 24..457 1751 76.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24890-PA 440 GL24890-PA 1..440 24..457 1853 79.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23546-PA 440 GA23546-PA 1..440 24..457 1868 79.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14540-PA 457 GM14540-PA 1..457 1..457 2369 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13733-PA 457 GD13733-PA 1..457 1..457 2381 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13175-PA 438 GJ13175-PA 1..438 24..457 1769 76.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19130-PA 449 GK19130-PA 1..449 24..457 1586 68.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21330-PA 457 GE21330-PA 1..457 1..457 2301 93 Plus