Clone MIP05121 Report

Search the DGRC for MIP05121

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:51
Well:21
Vector:pOT2
Associated Gene/TranscriptCG31244-RA
Protein status:MIP05121.pep: gold
Sequenced Size:1106

Clone Sequence Records

MIP05121.complete Sequence

1106 bp assembled on 2009-10-08

GenBank Submission: BT099978.1

> MIP05121.complete
ATAACTTTAAGTAGTCCAAATTTCAAGTTCATTTCAAATGCATAACAACA
GCTGTTTAGAACCCATGGACAGGACCAAGACTACGAAACTTCCTCAGCTC
AAGTCCAGCGTTACTCCCTACAGACCAAAGCCGAACCTAATCCGTAGTGA
TTCCCCGAAATTAGAGAACGATAAGCGTAATGGGCTGGACTTGGAGCTTC
TGGATAATCCAGAGATACCGAGCGTAAAGCGAGTACGATGGGCTCCGATG
TATGGGGAAAGGAGCCCGAGTAAGACCGGCTTTACCAGCGTTCCACTAAG
CTCCAAAAAGGCGCAGTTTGATCATGATACGACAGATGAGTTAATACTGG
CTAACGAGCTTCGATTAGCGGTGCATCGTGGGGGAGGTTCCATAGATCCC
GACAAGAACTACGAGCTGAGGGCTCGACTGTCGCCCTTGCAATTGCCGTA
CAGTCGAGTGCAGCGAATTCTGAAGGAGTGCGAGTTGAGCGAGAGGAATC
ATCACACCTATAGTATACCCATGGACTATGGGCGGCAATTGGTTGCCATG
GTTTGCAAGATCAGGACGGATAATCTCCCCGAACTGAAACTTCGCTTGGC
CTCCTTACTGCGGCAAAACAAAGCGCGCTTCTTCAATCGACATTTATTCA
ACGAAACTGGCTTGATTGAGGCCACATTGCCGAGCGTAACACCATTAAGC
TTTGAGGAATTCAATCAAACGTTGCGAATTGATGCTTTGTGGTGCAAAGC
CACCGATAGTACCATTACCGATTTGGCCAAAGGATCTGTTTTGTTCAAAT
GTCGGCCTCTGGACCTGCAAGAGGTCGCGTACAAACTCAGGCAGTGCAAC
TACAAGATTGTACATAAGGAGGTTGGACACTGTCCAAACAAGCCGCTCGT
CGAGTTAAATGATCGTCAAATGGCCCGCTATCAGGAGTTTCGTAAAAACC
TTCTTCAAGACATAGATGTCGTAAAGATCTATGACAATGTGCGTGTCCAG
TAGTTCAAGTCAGTTCGGCAAAAATCACAAGTAATTTTAAATTATCAAAA
GTTTAAATTATCCGTAATACAAAACTCTTAATGACCCTCTAAAAAAAAAA
AAAAAA

MIP05121.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31244-RA 1142 CG31244-RA 49..1139 1..1091 5455 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15221317..15222406 1090..1 5450 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:04:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19397429..19398519 1091..1 5455 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19138260..19139350 1091..1 5455 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:41:48 has no hits.

MIP05121.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:42:30 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15221317..15222406 1..1090 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:02 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 1..966 38..1003 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:42 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 1..966 38..1003 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:01:54 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 1..966 38..1003 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:36:46 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 1..966 38..1003 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-08 16:45:53 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 49..1138 1..1090 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:41 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 49..1138 1..1090 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:54 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 49..1138 1..1090 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:36:46 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
CG31244-RA 49..1138 1..1090 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:30 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19397430..19398519 1..1090 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:30 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19397430..19398519 1..1090 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:30 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19397430..19398519 1..1090 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:54 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15223152..15224241 1..1090 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:23:15 Download gff for MIP05121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19138261..19139350 1..1090 100   Minus

MIP05121.pep Sequence

Translation from 37 to 1002

> MIP05121.pep
MHNNSCLEPMDRTKTTKLPQLKSSVTPYRPKPNLIRSDSPKLENDKRNGL
DLELLDNPEIPSVKRVRWAPMYGERSPSKTGFTSVPLSSKKAQFDHDTTD
ELILANELRLAVHRGGGSIDPDKNYELRARLSPLQLPYSRVQRILKECEL
SERNHHTYSIPMDYGRQLVAMVCKIRTDNLPELKLRLASLLRQNKARFFN
RHLFNETGLIEATLPSVTPLSFEEFNQTLRIDALWCKATDSTITDLAKGS
VLFKCRPLDLQEVAYKLRQCNYKIVHKEVGHCPNKPLVELNDRQMARYQE
FRKNLLQDIDVVKIYDNVRVQ*

MIP05121.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:29:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18462-PA 324 GF18462-PA 1..324 1..320 1093 63.9 Plus
Dana\GF15761-PA 243 GF15761-PA 28..242 104..318 170 26 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15986-PA 320 GG15986-PA 1..320 1..321 1465 85.4 Plus
Dere\GG10101-PA 246 GG10101-PA 28..243 104..318 158 25.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13516-PA 245 GH13516-PA 28..244 104..318 177 27.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31244-PA 321 CG31244-PA 1..321 1..321 1681 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18134-PA 244 GI18134-PA 28..243 104..318 248 32.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11966-PA 307 GL11966-PA 1..306 25..321 845 55 Plus
Dper\GL19178-PA 244 GL19178-PA 28..243 104..318 177 25.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16118-PB 319 GA16118-PB 5..318 17..321 869 54.9 Plus
Dpse\GA18554-PA 244 GA18554-PA 28..243 104..318 180 25.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:30:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26908-PA 321 GM26908-PA 1..321 1..321 1622 94.4 Plus
Dsec\GM18104-PA 246 GM18104-PA 28..243 104..318 181 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:30:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20114-PA 321 GD20114-PA 1..321 1..321 1629 95 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14855-PA 244 GJ14855-PA 28..243 104..318 208 28.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23563-PA 246 GK23563-PA 31..245 107..319 178 27.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25129-PA 321 GE25129-PA 1..321 1..321 1519 88.5 Plus

MIP05121.hyp Sequence

Translation from 37 to 1002

> MIP05121.hyp
MHNNSCLEPMDRTKTTKLPQLKSSVTPYRPKPNLIRSDSPKLENDKRNGL
DLELLDNPEIPSVKRVRWAPMYGERSPSKTGFTSVPLSSKKAQFDHDTTD
ELILANELRLAVHRGGGSIDPDKNYELRARLSPLQLPYSRVQRILKECEL
SERNHHTYSIPMDYGRQLVAMVCKIRTDNLPELKLRLASLLRQNKARFFN
RHLFNETGLIEATLPSVTPLSFEEFNQTLRIDALWCKATDSTITDLAKGS
VLFKCRPLDLQEVAYKLRQCNYKIVHKEVGHCPNKPLVELNDRQMARYQE
FRKNLLQDIDVVKIYDNVRVQ*

MIP05121.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31244-PA 321 CG31244-PA 1..321 1..321 1681 100 Plus