Clone Sequence Records
MIP05301.complete Sequence
2684 bp assembled on 2009-04-28
GenBank Submission: BT082090.1
> MIP05301.complete
AGAAGGAACTCAAATTTAAGTTCACCAGCCATGCTCAACTCTTTGGCCAA
GAGAATTGTGCTTATGCCCAGCCTTATAGCACTGGAGGATACTTGTCGAA
CTATTCACGTTACCGCCCTAATGGCGAGGATGGGAAAGGATTTCTGTCCC
GTGAGTGAGGTTCCCGACTGCAAAGTGGTGAAGAAGCGACCGTGCAGTCC
CACGGATCCACCTGTTCGTCCTTGCAGCGAGGAGGGCTGCACCCAGCCGC
GATACTCATGTTGCGTGAGTACCGGCATTTCGGCGAATCCATGCGCTGAT
CCAAGCAAGAAGACCAAGTTCGTTTCGATGTGGAAGAGATACAAGGATGA
TGGTAGTAATCGGCCAGAAGCTATGTGGCACTACCCGGAGGAGTGCTGTC
CAAAGTGTGAGGATACGCGATTTGACGTTTTGTACTATACACCGTCGGAC
AAGTGCCGGGAGTTCCAGCGCACCTGGTGGGAATGCTGTCCAAAAATGGT
ACCGAAGCGGGTCTGCTGCTGGTGCGACGCCATTCCACCGGAGGTCCTGC
GGCGAGATTTGCCCATCTGCCCGCGATCCGCTTGTCTCGCAGAACATGAG
AGGAAGCGCTATAAGTGCCTAAACAAAAGGTACAAAGGTTGCATGCGTAT
CCGTATGCCGTGTTGTCGAACCGCTCGAATACCGCCCGACTGCAGGGCAT
TCCCCGGTCCTTCCGATTGCGAGAAGATCAAGTGCCCGTTCCCGAGTTAC
TCCGAATGCGTTCAGGAGGATCCCGCTGTTATCCCAACCCGGCCACCAGA
GTGTGAGTGCTTGAAAAAGGCGTCTCAGTGCGAGCAGATCCGACGAGGAC
GGCACATGGAAAACAACGACATAAGCATCTGGCCGTGTACTTCCAGGGGA
AGATGAAGACCGTATCCCAGGGTTATAGTAACTGGGGTCTTCGCTGGAAT
TTTTGTAACACAAAATGTAACAAAAATTCCAACAGAGACCAAAGTCCTGA
ACGGCAAGCCCTTCACCAGAAATCATAAACCTTTATAAACTCTTTTTATA
TTTATGATTTCTGGTGGTGTTGGGTATCCCTGTGGAATCCCCATCCCAGC
AACCCAACTGAAAATCTGTCAGTTGAGGTACATCTAATATCTCATTCAAT
TGGCATCCGGCACCCTGTTTAAAATTCAAAATTCTAGGCCTCGTTCAAAA
TTAAAACATGCCTCGCCTCTCGGTTTTCTGCGGATTATCGCGTAGAATCA
TCTGCTCCAGCACTGCTCACCGAAACCTTTGGCGACTGTTGTCCGACAGT
TCGGAGTCGACCATTATCCCACACGTTTCGGACAAAACGGAAAGTGTGAA
GAAATTCAAAAAGGAAACGCAGGTGGATCACACAAGTCACCTATTTGTAT
GGCCGGAGGCGAAGGACGAAAACGTTCATCATGTGAAAGAGAACAAAGAG
GATAGCAATGACGATATAACTGCATCCTGGGGCTGGAAAAATGACGAGCT
TGACGTGGAGCAATTGGCAGGACTACCAAGTCCTAATGAGGTGGAGGATC
CATACCGGCAGCCAAACAATGAATCTCAGGATGATCAGTTGCCATTCGCT
GAAGGAGACCAATCAGGAATTCAAGAAGAATTACAATTCGCAAGAACGCG
CTCCCTGCGAGAACAGCTTGTCAAGAATCAGGCGTCCCAAGAACCTTTTA
CCAGCTTTGAGAAAACATCTCTCACATCCGTTCGAAGGAATGTGGACTTC
ATGATGCAAGAGCTTAGTCAGATTTCACTTATTTTGAATACTATGGGAGG
AGGTGAAAAAACAATGGGGATGGTTAACTCTGAACCGGATGTGGCTTCCT
TTGCACTCAACCAACCCAAAATCAGTGAAAGTTTGAATCATGAGGAGGAA
TCAAATCAGTCAGTGGATAGAGCTAGTTCCCATCAATCTGAGCTAGGTGT
TGCAGATTCTATGCATTCGGAGGTAGCCAGTGCGCTCTCAGAACCATCTG
GATTGGGTGATGTAGAGAGCCTAGATCATAGCGAGATTTCGAACCAGTCT
TTTGATTCCGAACTAACGAGGGATATCACCGATCAACTTAAATTGGATCA
CGAGATGGAAGCAAATCAGTCTTTGGATTCTGAGTTAACCGGTGAAATAA
CTAATCAATCTAGTTCGGTAGTTTCAGAGTCTTCGATTTCCGATGAGGAC
TTCGGGGAGGAGCTAATAAAACAATCTCACAAAATCGAGCAAATTGCGTC
TGCTGGCGATACTCAAGAGTCCAGTCCTTCAAAAACCAATGAGAATACTC
CCAAGACTGATGACACGCAGGACACTCAGCCTAAGGAAACCATACACACC
TACAGGCCCTTTAGGACTATCGAAGTTCCTGCCAAGAAGCCTACTAGTAG
CCTTAGCACCGAGTCAATTGAAGAGCAGCCGTTGAACCAGGAACCCCAAT
TCGGCACAGGTATCCATTTAGATAGAGAACGGTACAAAGTTTCTGCTCAG
CTGACCGAGTCCGAGTCCCGCTTACTTATGCGCATGGCTCTGAAGCAGGC
TTTAATCGATCTGGAGTCTGGCCAAAGCAAGTACAAAGCAACAATTCTGG
AGGCTGAAACCGAGTAATACAAGAGCACCAATGACCAAAGAAATAAACAT
AACCTTTAAAACTTAAAAAAAAAAAAAAAAAAAA
MIP05301.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spaw-RA | 2243 | spaw-RA | 1..1726 | 940..2665 | 8630 | 100 | Plus |
hubl-RA | 934 | hubl-RA | 28..934 | 1..907 | 4535 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:45:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 4246989..4249652 | 2664..1 | 13260 | 99.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:04:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:45:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8359465..8362129 | 2665..1 | 13325 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 8360664..8363328 | 2665..1 | 13325 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 23:45:38 has no hits.
MIP05301.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:46:28 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 4246989..4249652 | 1..2664 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:08 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30365-RA | 1..1410 | 1208..2617 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:46:37 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RA | 1..1410 | 1208..2617 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:07 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RA | 1..1410 | 1208..2617 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:44 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RA | 1..1410 | 1208..2617 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-28 17:10:03 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30365-RA | 1..1725 | 940..2664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:46:37 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RA | 1..1552 | 1113..2664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:07 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RB | 28..2691 | 1..2664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:44 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hubl-RB | 28..2691 | 1..2664 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:28 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8359466..8362129 | 1..2664 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:28 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8359466..8362129 | 1..2664 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:28 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8359466..8362129 | 1..2664 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:07 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4246971..4249634 | 1..2664 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:32:26 Download gff for
MIP05301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8360665..8363328 | 1..2664 | 100 | | Minus |
MIP05301.pep Sequence
Translation from 1207 to 2616
> MIP05301.pep
MPRLSVFCGLSRRIICSSTAHRNLWRLLSDSSESTIIPHVSDKTESVKKF
KKETQVDHTSHLFVWPEAKDENVHHVKENKEDSNDDITASWGWKNDELDV
EQLAGLPSPNEVEDPYRQPNNESQDDQLPFAEGDQSGIQEELQFARTRSL
REQLVKNQASQEPFTSFEKTSLTSVRRNVDFMMQELSQISLILNTMGGGE
KTMGMVNSEPDVASFALNQPKISESLNHEEESNQSVDRASSHQSELGVAD
SMHSEVASALSEPSGLGDVESLDHSEISNQSFDSELTRDITDQLKLDHEM
EANQSLDSELTGEITNQSSSVVSESSISDEDFGEELIKQSHKIEQIASAG
DTQESSPSKTNENTPKTDDTQDTQPKETIHTYRPFRTIEVPAKKPTSSLS
TESIEEQPLNQEPQFGTGIHLDRERYKVSAQLTESESRLLMRMALKQALI
DLESGQSKYKATILEAETE*
MIP05301.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:22:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10656-PA | 462 | GG10656-PA | 1..462 | 1..469 | 1769 | 74.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spaw-PB | 469 | CG30365-PB | 1..469 | 1..469 | 2381 | 100 | Plus |
spaw-PA | 469 | CG30365-PA | 1..469 | 1..469 | 2381 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:22:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20700-PA | 461 | GM20700-PA | 1..461 | 1..469 | 2173 | 88.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:22:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15285-PA | 468 | GD15285-PA | 1..468 | 1..469 | 2146 | 90 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:22:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23137-PA | 471 | GE23137-PA | 1..471 | 1..469 | 1790 | 75.8 | Plus |
MIP05301.hyp Sequence
Translation from 1207 to 2616
> MIP05301.hyp
MPRLSVFCGLSRRIICSSTAHRNLWRLLSDSSESTIIPHVSDKTESVKKF
KKETQVDHTSHLFVWPEAKDENVHHVKENKEDSNDDITASWGWKNDELDV
EQLAGLPSPNEVEDPYRQPNNESQDDQLPFAEGDQSGIQEELQFARTRSL
REQLVKNQASQEPFTSFEKTSLTSVRRNVDFMMQELSQISLILNTMGGGE
KTMGMVNSEPDVASFALNQPKISESLNHEEESNQSVDRASSHQSELGVAD
SMHSEVASALSEPSGLGDVESLDHSEISNQSFDSELTRDITDQLKLDHEM
EANQSLDSELTGEITNQSSSVVSESSISDEDFGEELIKQSHKIEQIASAG
DTQESSPSKTNENTPKTDDTQDTQPKETIHTYRPFRTIEVPAKKPTSSLS
TESIEEQPLNQEPQFGTGIHLDRERYKVSAQLTESESRLLMRMALKQALI
DLESGQSKYKATILEAETE*
MIP05301.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:01:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spaw-PB | 469 | CG30365-PB | 1..469 | 1..469 | 2381 | 100 | Plus |
spaw-PA | 469 | CG30365-PA | 1..469 | 1..469 | 2381 | 100 | Plus |