Clone MIP05422 Report

Search the DGRC for MIP05422

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:54
Well:22
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG16799-RA
Protein status:MIP05422.pep: gold
Sequenced Size:713

Clone Sequence Records

MIP05422.complete Sequence

713 bp assembled on 2009-02-17

GenBank Submission: BT059796.1

> MIP05422.complete
CAGCAGCGTCGCACCGGCGGGCTAGCTTCTCATCGGATCCGATCGGGTGT
GCAAATCATACATATAAACATATGTGTTTGAAAGCACGCCATCCCAAAAC
GAAACGCGATCTGATGAACATGAAAACTTTTTGTTTATGGATAGTTCCAG
TGCTGATCCTGCTGCAGCTGGGAATCGAGCAAGTGGAGTCCAAAAAATAT
CAGCGCTGCGAACTCACAAGAGTTTTGGTGGAGAACTACAACTTCGACAA
GACCTTCATTTCCAACTGGATCTGTTTGGTGGAGCACGAAAGTTACTTGG
ACACCACCAAAGTAACGAAAAAGGGAAACGAAAGCAAGAACTATGGCCTC
TTTCAGATCAACAGCAAGGATTATTGCAGCGAAGGACGAAAAGGAGGGCA
GTGCAATATGAAATGTGAAGACTTCTCCAATGACGACATCAGTGACGACA
TCGCCTGCGCCAGAATGATCCAGGAACGCGAGGGCTTCAAATACTGGAAG
GGCTGGGATCGCTTCTGCCGCAATCCACAGAATCTGCCCAATCTCCGCGT
GGCCTGCAACCTGCGTAGCCTGTCTCCAGTGCGATCACCTCGTGGATTCT
TAACGGGCTGAACAGCTATGTGCTATATGCTACTTGAACATCTATCTTAA
AGATACATACTACATATGTGTACGTGTACATAAATGCTTTTGCATAAAAA
AAAAAAAAAAAAA

MIP05422.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16799-RA 1106 CG16799-RA 171..867 1..697 3485 100 Plus
CG16799.a 1341 CG16799.a 73..769 1..697 3485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16539849..16540125 695..419 1370 99.6 Minus
chr2R 21145070 chr2R 16540465..16540625 268..108 790 99.4 Minus
chr2R 21145070 chr2R 16540261..16540413 420..268 765 100 Minus
chr2R 21145070 chr2R 16541680..16541787 108..1 540 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:04:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20653129..20653407 697..419 1395 100 Minus
2R 25286936 2R 20653744..20653904 268..108 805 100 Minus
2R 25286936 2R 20653540..20653692 420..268 765 100 Minus
2R 25286936 2R 20654970..20655077 108..1 540 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20654328..20654606 697..419 1395 100 Minus
2R 25260384 2R 20654943..20655103 268..108 805 100 Minus
2R 25260384 2R 20654739..20654891 420..268 765 100 Minus
2R 25260384 2R 20656169..20656276 108..1 540 100 Minus
Blast to na_te.dros performed on 2019-03-15 23:16:36 has no hits.

MIP05422.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:17:24 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16539849..16540123 421..695 99 <- Minus
chr2R 16540261..16540413 268..420 100 <- Minus
chr2R 16540466..16540624 109..267 99 <- Minus
chr2R 16541680..16541787 1..108 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:42 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 1..540 72..611 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:34:57 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 1..540 72..611 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:36:10 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 1..540 72..611 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:27:20 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 1..540 72..611 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-17 18:01:10 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 15..625 1..611 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:34:57 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 15..709 1..695 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:36:10 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 20..714 1..695 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:27:20 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
CG16799-RA 20..714 1..695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:24 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20653131..20653405 421..695 100 <- Minus
2R 20653540..20653692 268..420 100 <- Minus
2R 20653745..20653903 109..267 100 <- Minus
2R 20654970..20655077 1..108 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:24 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20653131..20653405 421..695 100 <- Minus
2R 20653540..20653692 268..420 100 <- Minus
2R 20653745..20653903 109..267 100 <- Minus
2R 20654970..20655077 1..108 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:17:24 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20653131..20653405 421..695 100 <- Minus
2R 20653540..20653692 268..420 100 <- Minus
2R 20653745..20653903 109..267 100 <- Minus
2R 20654970..20655077 1..108 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:36:10 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16541250..16541408 109..267 100 <- Minus
arm_2R 16542475..16542582 1..108 100   Minus
arm_2R 16540636..16540910 421..695 100 <- Minus
arm_2R 16541045..16541197 268..420 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:17 Download gff for MIP05422.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20654739..20654891 268..420 100 <- Minus
2R 20654944..20655102 109..267 100 <- Minus
2R 20656169..20656276 1..108 100   Minus
2R 20654330..20654604 421..695 100 <- Minus

MIP05422.pep Sequence

Translation from 2 to 610

> MIP05422.pep
AASHRRASFSSDPIGCANHTYKHMCLKARHPKTKRDLMNMKTFCLWIVPV
LILLQLGIEQVESKKYQRCELTRVLVENYNFDKTFISNWICLVEHESYLD
TTKVTKKGNESKNYGLFQINSKDYCSEGRKGGQCNMKCEDFSNDDISDDI
ACARMIQEREGFKYWKGWDRFCRNPQNLPNLRVACNLRSLSPVRSPRGFL
TG*

MIP05422.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12751-PA 164 GF12751-PA 1..161 40..200 753 84.5 Plus
Dana\GF21082-PA 159 GF21082-PA 34..159 61..187 418 56.7 Plus
Dana\GF12750-PA 146 GF12750-PA 24..143 60..181 313 49.2 Plus
Dana\GF24155-PA 1337 GF24155-PA 604..730 62..181 198 33.6 Plus
Dana\GF24155-PA 1337 GF24155-PA 178..305 55..174 194 32 Plus
Dana\GF24155-PA 1337 GF24155-PA 445..563 64..173 183 35.3 Plus
Dana\GF10070-PA 141 GF10070-PA 4..137 48..181 183 30.4 Plus
Dana\GF24155-PA 1337 GF24155-PA 4..136 46..175 162 27 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20840-PA 179 GG20840-PA 1..179 24..202 913 93.9 Plus
Dere\GG18760-PA 176 GG18760-PA 51..176 61..187 400 52.8 Plus
Dere\GG20839-PA 146 GG20839-PA 24..143 60..181 312 49.2 Plus
Dere\GG14940-PA 1066 GG14940-PA 596..721 63..181 215 36.2 Plus
Dere\GG14940-PA 1066 GG14940-PA 436..557 60..173 197 33.6 Plus
Dere\GG14940-PA 1066 GG14940-PA 170..303 49..174 189 31.3 Plus
Dere\GG14615-PA 141 GG14615-PA 6..137 50..181 180 30.9 Plus
Dere\GG14940-PA 1066 GG14940-PA 17..138 63..177 159 27 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19893-PA 169 GH19893-PA 26..163 59..196 595 78.3 Plus
Dgri\GH24755-PA 146 GH24755-PA 4..146 48..187 404 49.3 Plus
Dgri\GH23420-PA 146 GH23420-PA 4..146 48..187 404 49.3 Plus
Dgri\GH19892-PA 145 GH19892-PA 23..142 60..181 311 48.4 Plus
Dgri\GH16162-PA 1204 GH16162-PA 457..580 59..174 215 36.3 Plus
Dgri\GH16162-PA 1204 GH16162-PA 196..319 59..174 207 34.7 Plus
Dgri\GH16162-PA 1204 GH16162-PA 617..737 62..174 200 33.9 Plus
Dgri\GH16162-PA 1204 GH16162-PA 937..1063 62..181 190 32.8 Plus
Dgri\GH16162-PA 1204 GH16162-PA 777..897 62..174 187 32.2 Plus
Dgri\GH16162-PA 1204 GH16162-PA 22..139 63..173 174 30.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG16799-PB 179 CG16799-PB 1..179 24..202 980 100 Plus
CG16799-PA 179 CG16799-PA 1..179 24..202 980 100 Plus
CG16756-PA 152 CG16756-PA 18..152 50..187 423 50 Plus
CG11159-PA 146 CG11159-PA 14..143 50..181 332 49.2 Plus
CG8492-PD 1360 CG8492-PD 594..720 62..181 217 36.7 Plus
CG8492-PD 1360 CG8492-PD 435..556 60..173 199 34.4 Plus
CG7798-PA 148 CG7798-PA 1..130 45..173 192 33.1 Plus
CG8492-PD 1360 CG8492-PD 170..303 49..174 188 32.8 Plus
LysP-PA 141 CG9116-PA 6..137 50..181 183 30.9 Plus
CG8492-PD 1360 CG8492-PD 4..138 46..177 179 28.8 Plus
CG30062-PB 171 CG30062-PB 11..140 47..172 167 32.1 Plus
LysS-PA 140 CG1165-PA 7..126 51..168 162 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19848-PA 160 GI19848-PA 20..157 59..196 578 74.6 Plus
Dmoj\GI15787-PA 146 GI15787-PA 1..146 40..187 417 51.4 Plus
Dmoj\GI19847-PA 145 GI19847-PA 23..142 60..181 314 49.2 Plus
Dmoj\GI13315-PA 1195 GI13315-PA 794..918 64..181 213 35.7 Plus
Dmoj\GI13315-PA 1195 GI13315-PA 187..320 49..174 202 32.1 Plus
Dmoj\GI13315-PA 1195 GI13315-PA 472..591 64..174 194 35.8 Plus
Dmoj\GI13315-PA 1195 GI13315-PA 633..752 64..174 178 33.3 Plus
Dmoj\GI16641-PA 144 GI16641-PA 1..139 40..181 175 28.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17433-PA 165 GL17433-PA 1..160 40..199 685 83.8 Plus
Dper\GL16431-PA 149 GL16431-PA 11..149 38..187 395 46.7 Plus
Dper\GL17432-PA 146 GL17432-PA 24..143 60..181 310 48.4 Plus
Dper\GL17828-PA 1039 GL17828-PA 622..767 59..197 209 31.3 Plus
Dper\GL17828-PA 1039 GL17828-PA 467..586 64..173 200 35.8 Plus
Dper\GL17828-PA 1039 GL17828-PA 186..314 52..172 192 31 Plus
Dper\GL17828-PA 1039 GL17828-PA 22..156 58..187 174 25.5 Plus
Dper\GL21426-PA 142 GL21426-PA 19..142 64..187 157 29.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24823-PA 165 GA24823-PA 1..161 40..200 689 83.9 Plus
Dpse\GA14129-PA 149 GA14129-PA 26..149 63..187 391 52.8 Plus
Dpse\GA10804-PA 146 GA10804-PA 24..143 60..181 310 48.4 Plus
Dpse\GA28499-PA 1221 GA28499-PA 632..777 59..197 207 30.6 Plus
Dpse\GA28499-PA 1221 GA28499-PA 477..596 64..173 198 35.8 Plus
Dpse\GA28499-PA 1221 GA28499-PA 194..314 60..172 189 32.2 Plus
Dpse\GA28482-PA 141 GA28482-PA 6..129 47..167 169 27.2 Plus
Dpse\GA28499-PA 1221 GA28499-PA 24..156 60..187 168 25.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19770-PA 179 GM19770-PA 1..179 24..202 948 97.8 Plus
Dsec\GM12412-PA 152 GM12412-PA 27..152 61..187 403 52.8 Plus
Dsec\GM19768-PA 146 GM19768-PA 24..143 60..181 312 49.2 Plus
Dsec\GM24992-PA 1056 GM24992-PA 594..720 62..181 216 36.7 Plus
Dsec\GM24992-PA 1056 GM24992-PA 435..556 60..173 200 34.4 Plus
Dsec\GM24992-PA 1056 GM24992-PA 170..303 49..174 197 32.1 Plus
Dsec\GM24992-PA 1056 GM24992-PA 17..138 63..177 158 27 Plus
Dsec\GM20080-PA 148 GM20080-PA 1..130 47..173 151 30.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25259-PA 179 GD25259-PA 1..179 24..202 939 97.2 Plus
Dsim\GD25258-PA 146 GD25258-PA 24..143 60..181 312 49.2 Plus
Dsim\GD13037-PA 868 GD13037-PA 594..720 62..181 218 36.7 Plus
Dsim\GD13037-PA 868 GD13037-PA 435..556 60..173 199 34.4 Plus
Dsim\GD13037-PA 868 GD13037-PA 170..303 49..174 192 32.1 Plus
Dsim\GD13037-PA 868 GD13037-PA 17..138 63..177 164 27.9 Plus
Dsim\GD17618-PA 140 GD17618-PA 6..126 50..168 162 28.7 Plus
Dsim\GD17617-PA 140 GD17617-PA 6..126 50..168 162 28.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18809-PA 164 GJ18809-PA 22..164 57..199 605 76.2 Plus
Dvir\GJ18643-PA 146 GJ18643-PA 21..146 61..187 402 54.3 Plus
Dvir\GJ18798-PA 147 GJ18798-PA 26..144 61..181 308 48.8 Plus
Dvir\GJ20082-PA 63 GJ20082-PA 5..63 141..199 255 74.6 Plus
Dvir\GJ12084-PA 1101 GJ12084-PA 429..548 64..174 210 36.7 Plus
Dvir\GJ12084-PA 1101 GJ12084-PA 181..307 56..174 200 33.1 Plus
Dvir\GJ12084-PA 1101 GJ12084-PA 587..704 64..173 194 33.9 Plus
Dvir\GJ12084-PA 1101 GJ12084-PA 25..154 63..187 183 28 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21589-PA 161 GK21589-PA 6..161 47..202 678 78.8 Plus
Dwil\GK21588-PA 148 GK21588-PA 27..145 61..181 311 48.8 Plus
Dwil\GK15326-PA 120 GK15326-PA 22..118 60..157 277 52 Plus
Dwil\GK10945-PA 1034 GK10945-PA 700..839 49..181 207 33.3 Plus
Dwil\GK10945-PA 1034 GK10945-PA 176..309 47..174 195 34.3 Plus
Dwil\GK10945-PA 1034 GK10945-PA 565..683 64..174 193 34.5 Plus
Dwil\GK10945-PA 1034 GK10945-PA 412..530 64..174 190 33.6 Plus
Dwil\GK10945-PA 1034 GK10945-PA 2..131 45..173 167 27.9 Plus
Dwil\GK21106-PA 141 GK21106-PA 20..127 64..168 144 30.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13779-PA 179 GE13779-PA 1..179 24..202 907 93.9 Plus
Dyak\GE16404-PA 152 GE16404-PA 27..152 61..187 392 52 Plus
Dyak\GE13778-PA 146 GE13778-PA 24..143 60..181 312 49.2 Plus
Dyak\GE20392-PA 967 GE20392-PA 596..722 62..181 207 35.2 Plus
Dyak\GE20392-PA 967 GE20392-PA 170..303 49..174 198 32.8 Plus
Dyak\GE20392-PA 967 GE20392-PA 437..558 60..173 198 33.6 Plus
Dyak\GE20976-PA 141 GE20976-PA 6..137 50..181 187 32.4 Plus
Dyak\GE20392-PA 967 GE20392-PA 17..134 63..173 159 27.1 Plus

MIP05422.hyp Sequence

Translation from 2 to 610

> MIP05422.hyp
AASHRRASFSSDPIGCANHTYKHMCLKARHPKTKRDLMNMKTFCLWIVPV
LILLQLGIEQVESKKYQRCELTRVLVENYNFDKTFISNWICLVEHESYLD
TTKVTKKGNESKNYGLFQINSKDYCSEGRKGGQCNMKCEDFSNDDISDDI
ACARMIQEREGFKYWKGWDRFCRNPQNLPNLRVACNLRSLSPVRSPRGFL
TG*

MIP05422.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG16799-PB 179 CG16799-PB 1..179 24..202 980 100 Plus
CG16799-PA 179 CG16799-PA 1..179 24..202 980 100 Plus
CG16756-PA 152 CG16756-PA 18..152 50..187 423 50 Plus
CG11159-PA 146 CG11159-PA 14..143 50..181 332 49.2 Plus
CG8492-PD 1360 CG8492-PD 594..720 62..181 217 36.7 Plus