Clone MIP05602 Report

Search the DGRC for MIP05602

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:56
Well:2
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptSpn31A-RA
Protein status:MIP05602.pep: gold
Sequenced Size:1388

Clone Sequence Records

MIP05602.complete Sequence

1388 bp assembled on 2009-02-17

GenBank Submission: BT059801.1

> MIP05602.complete
CGACTTTCTGCCGAAGCTGCGTGCGGGCGTGAATCTCTAAGGGCAACTAA
TTTATATAATTGCAAAACGATCTGAACTGACATTACGCATTTGAAACTTA
AAAATTTCTAACGATTTTTAAAAAAGCAACACAATGAGTGAAGCTGCCAA
TCCAACGCCCTATGATTGCCACATAGGTGCTGGTATTTACCACAGCATAG
CAACGAGTTTTGCAGAACAAAATGTAGTTGTATCACCACTACTACTGGAA
GCCACTCTGTCCCTGCTCTTCCTGGGATCGGATGGAGCCACCGCCGAGGA
GCTGCAGAAACAACTGCGACTGAAGCAACGTTTTGCCAGCAATGCCAAAA
TGGCCAATTTCTATGCCGCGGAACTGGGCAATATCACAACAGATGCAGAT
ACCTTCCTGCAGCTGCAGAATCGTTTGATGCTGTCATCTGAATCTGGAGT
GGCCGATGATTTCCAGAAGATTGCACAAACCTATTTCCATGCCACTGCCG
AGTGTGTTGATCTGGAGCAAACGGAGAAACTGCGTCGCCACATCAGCGAA
CAGATCCTGGCCAGCGTTGGAGGCGGCAGCTGGAAGGATATTCACGTGGC
AGGTGGTTCGTCAGCCAATACCCTGCTCCTGCTGCTGGCCGCCAATCTGC
AGAGCAAGTGGTTCCTGCCCTTCAGTGCCTACAGAACCGGACTCTATGAG
TTTCACAGCGGCAGCCAGGTGAAATCGGTGCCCATGCTCTTCGACGACGA
CATGTTCGTGAAGTTCGCTGAGCTGAGGGATCTGGATGCGCGTGCCATTG
AGCTGCCCTACGAGCACGCCGAGGAGCTGTCCATGCTGCTCATTCTGCCC
AATCAGCGTGGTGGCCTGCAGGAACTGGAGAAGCAGCTGCATGACCTGGA
TTTGGGTGCACTGCAGCAGCGAATGCAGATGGAGGGCGTGCAGGTGTTGC
TGCCCAAATTCAGTATCGATTTCGAGTGCAGTCTGCGGCAGCCGTTGAAA
CAGCTCGGCTTTGAGGAGATATTTGCTGCATCGGCGAACTTCAAACATCT
GCATGCATCGGCGAATCTGCCCATTGCCGATGTTCTTCAAAAGCTGCGCA
TAAATCTGAATGAGTCTGGATCCGGATCCGGACCCGAGTTACCAAAGAAT
GCCACAGAATATAAGCCCATTGTGATCAGCAATTCCTCCCGCCAGAAATT
CTTCCGAGCTGACCATCCATTCTTCTTCGCCATTCGCAGTGAGAATGTGA
CCTATCTGATGGGTCACGTGGTGGAATTTTAAAAATTCTTAAAATTTAGA
TACACGGAAGGGTAGTGCAATATGTTAACTTCTATAAAACTAAGTAAAAT
AAAACTAATATTTACTAAACAAAAAAAAAAAAAAAAAA

MIP05602.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG4804-RA 1893 CG4804-RA 423..1794 1..1372 6860 100 Plus
CG4804.a 1309 CG4804.a 67..1309 124..1366 6215 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10061512..10062391 124..1003 4355 99.7 Plus
chr2L 23010047 chr2L 10062661..10062880 1155..1370 960 96.8 Plus
chr2L 23010047 chr2L 10062450..10062605 1002..1157 735 98.1 Plus
chr2L 23010047 chr2L 10059815..10059940 1..126 600 98.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10062562..10063441 124..1003 4400 100 Plus
2L 23513712 2L 10063710..10063927 1155..1372 1090 100 Plus
2L 23513712 2L 10063499..10063654 1002..1157 780 100 Plus
2L 23513712 2L 10060874..10060999 1..126 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10062562..10063441 124..1003 4400 100 Plus
2L 23513712 2L 10063710..10063927 1155..1372 1090 100 Plus
2L 23513712 2L 10063499..10063654 1002..1157 780 100 Plus
2L 23513712 2L 10060874..10060999 1..126 630 100 Plus
Blast to na_te.dros performed on 2019-03-16 10:33:44 has no hits.

MIP05602.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:34:22 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10059815..10059940 1..126 98 -> Plus
chr2L 10061515..10062391 127..1003 99 -> Plus
chr2L 10062452..10062605 1004..1157 98 -> Plus
chr2L 10062664..10062880 1158..1370 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:46 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
CG4804-RA 1..1149 134..1282 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:34:51 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 1..1149 134..1282 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:43:05 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 1..1149 134..1282 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:12:25 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 1..1149 134..1282 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-17 18:01:14 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
CG4804-RA 1..1259 24..1282 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:34:50 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 4..1373 1..1370 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:43:05 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 59..1428 1..1370 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:12:25 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
Spn31A-RA 59..1428 1..1370 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:34:22 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10060874..10060999 1..126 100 -> Plus
2L 10062565..10063441 127..1003 100 -> Plus
2L 10063501..10063654 1004..1157 100 -> Plus
2L 10063713..10063925 1158..1370 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:34:22 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10060874..10060999 1..126 100 -> Plus
2L 10062565..10063441 127..1003 100 -> Plus
2L 10063501..10063654 1004..1157 100 -> Plus
2L 10063713..10063925 1158..1370 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:34:22 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10060874..10060999 1..126 100 -> Plus
2L 10062565..10063441 127..1003 100 -> Plus
2L 10063501..10063654 1004..1157 100 -> Plus
2L 10063713..10063925 1158..1370 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:43:05 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10060874..10060999 1..126 100 -> Plus
arm_2L 10062565..10063441 127..1003 100 -> Plus
arm_2L 10063501..10063654 1004..1157 100 -> Plus
arm_2L 10063713..10063925 1158..1370 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:10 Download gff for MIP05602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10062565..10063441 127..1003 100 -> Plus
2L 10063501..10063654 1004..1157 100 -> Plus
2L 10063713..10063925 1158..1370 100   Plus
2L 10060874..10060999 1..126 100 -> Plus

MIP05602.pep Sequence

Translation from 133 to 1281

> MIP05602.pep
MSEAANPTPYDCHIGAGIYHSIATSFAEQNVVVSPLLLEATLSLLFLGSD
GATAEELQKQLRLKQRFASNAKMANFYAAELGNITTDADTFLQLQNRLML
SSESGVADDFQKIAQTYFHATAECVDLEQTEKLRRHISEQILASVGGGSW
KDIHVAGGSSANTLLLLLAANLQSKWFLPFSAYRTGLYEFHSGSQVKSVP
MLFDDDMFVKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEK
QLHDLDLGALQQRMQMEGVQVLLPKFSIDFECSLRQPLKQLGFEEIFAAS
ANFKHLHASANLPIADVLQKLRINLNESGSGSGPELPKNATEYKPIVISN
SSRQKFFRADHPFFFAIRSENVTYLMGHVVEF*

MIP05602.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15742-PA 386 GF15742-PA 1..385 1..379 1457 78.6 Plus
Dana\GF12698-PA 390 GF12698-PA 34..390 18..382 424 30.1 Plus
Dana\GF12444-PA 382 GF12444-PA 35..381 30..381 391 30 Plus
Dana\GF13145-PA 438 GF13145-PA 31..377 29..380 368 29.2 Plus
Dana\GF12243-PA 472 GF12243-PA 93..447 18..379 364 30.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10084-PA 379 GG10084-PA 1..379 1..382 1761 92.1 Plus
Dere\GG23260-PA 390 GG23260-PA 34..390 18..382 436 30.9 Plus
Dere\GG23229-PA 401 GG23229-PA 30..375 27..377 371 28.9 Plus
Dere\GG10764-PA 473 GG10764-PA 100..454 18..379 362 30.2 Plus
Dere\GG23231-PA 404 GG23231-PA 39..401 18..379 357 30.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11073-PA 390 GH11073-PA 1..390 1..382 1336 70.2 Plus
Dgri\GH21519-PA 384 GH21519-PA 11..384 1..382 430 29.6 Plus
Dgri\GH22013-PA 401 GH22013-PA 33..378 30..381 387 28.9 Plus
Dgri\GH20376-PA 525 GH20376-PA 153..517 10..381 383 30.4 Plus
Dgri\GH20566-PA 384 GH20566-PA 36..383 30..381 360 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Spn31A-PA 382 CG4804-PA 1..382 1..382 1940 100 Plus
Spn43Aa-PA 390 CG12172-PA 34..390 18..382 422 30.4 Plus
Spn42Dc-PB 403 CG9455-PB 33..375 30..377 388 29.7 Plus
Spn42Dc-PA 403 CG9455-PA 33..375 30..377 388 29.7 Plus
Spn42De-PB 386 CG9460-PB 14..383 11..379 367 29.8 Plus
Spn42De-PA 404 CG9460-PA 32..401 11..379 367 29.8 Plus
nec-PA 476 CG1857-PA 114..468 18..379 364 29.4 Plus
Spn28F-PA 375 CG8137-PA 11..372 8..381 358 28.6 Plus
Spn43Ab-PB 393 CG1865-PB 32..390 14..382 348 27.9 Plus
Spn42Dd-PB 372 CG9456-PB 11..370 8..380 347 29.5 Plus
Spn28B-PB 378 CG6717-PB 22..375 19..381 342 27 Plus
Spn28B-PA 378 CG6717-PA 22..375 19..381 342 27 Plus
Spn38F-PB 370 CG9334-PB 11..366 8..380 329 28.8 Plus
Spn38F-PA 372 CG9334-PA 11..368 8..380 327 28.8 Plus
Spn47C-PC 382 CG7722-PC 34..381 30..381 325 27.1 Plus
Spn47C-PB 382 CG7722-PB 34..381 30..381 325 27.1 Plus
Spn47C-PA 382 CG7722-PA 34..381 30..381 325 27.1 Plus
Spn55B-PA 374 CG10913-PA 19..372 18..381 308 24.9 Plus
Spn42Da-PJ 374 CG9453-PJ 20..361 18..369 294 26.2 Plus
Spn42Da-PI 406 CG9453-PI 52..393 18..369 294 26.2 Plus
Spn28Da-PB 384 CG31902-PB 21..371 18..381 292 27.3 Plus
Spn42Da-PA 392 CG9453-PA 20..377 18..380 287 25.9 Plus
Spn42Da-PB 424 CG9453-PB 52..409 18..380 287 25.9 Plus
Spn42Da-PG 379 CG9453-PG 20..371 18..375 274 25.7 Plus
Spn42Da-PD 411 CG9453-PD 52..403 18..375 274 25.7 Plus
Spn42Da-PL 379 CG9453-PL 20..379 18..382 273 24.8 Plus
Spn42Da-PK 379 CG9453-PK 20..379 18..382 273 24.8 Plus
Spn42Da-PH 379 CG9453-PH 20..379 18..382 273 24.8 Plus
Spn42Da-PF 411 CG9453-PF 52..411 18..382 273 24.8 Plus
Spn42Da-PE 411 CG9453-PE 52..411 18..382 273 24.8 Plus
Spn43Ad-PA 407 CG1859-PA 53..406 28..381 248 26.1 Plus
Spn53F-PB 379 CG10956-PB 26..379 18..382 244 24 Plus
Spn28Db-PB 377 CG33121-PB 35..369 27..380 235 25.1 Plus
Spn42Db-PC 388 CG9454-PC 17..374 18..380 231 24.5 Plus
Spn27A-PB 447 CG11331-PB 90..430 27..371 218 24.2 Plus
Spn27A-PA 447 CG11331-PA 90..430 27..371 218 24.2 Plus
Spn77Ba-PC 450 CG6680-PC 88..430 21..367 197 23 Plus
Spn77Ba-PB 450 CG6680-PB 88..430 21..367 197 23 Plus
Spn77Ba-PA 450 CG6680-PA 88..430 21..367 197 23 Plus
Spn100A-PA 649 CG1342-PA 396..569 160..332 170 25 Plus
Spn42Db-PD 286 CG9454-PD 17..282 18..288 164 24.1 Plus
Spn88Eb-PA 426 CG6687-PA 57..413 30..376 164 22.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17591-PA 390 GI17591-PA 15..390 11..382 1313 73 Plus
Dmoj\GI19487-PA 384 GI19487-PA 28..384 18..382 421 29 Plus
Dmoj\GI20049-PA 503 GI20049-PA 133..495 10..381 407 32.5 Plus
Dmoj\GI19718-PA 395 GI19718-PA 30..376 30..380 348 30.3 Plus
Dmoj\GI20051-PA 396 GI20051-PA 35..393 14..382 334 27.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18959-PA 390 GL18959-PA 1..390 1..382 1465 76.6 Plus
Dper\GL11156-PA 390 GL11156-PA 34..390 18..382 422 30.5 Plus
Dper\GL11126-PA 421 GL11126-PA 58..418 18..379 416 32.7 Plus
Dper\GL13962-PA 395 GL13962-PA 19..390 5..379 408 29.9 Plus
Dper\GL13963-PA 376 GL13963-PA 5..373 11..380 389 28.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18444-PA 390 GA18444-PA 1..390 1..382 1462 76.3 Plus
Dpse\GA11452-PA 390 GA11452-PA 34..390 18..382 421 30.5 Plus
Dpse\GA24618-PA 407 GA24618-PA 45..404 18..379 405 32.3 Plus
Dpse\GA26906-PA 395 GA26906-PA 19..390 5..379 403 29.9 Plus
Dpse\GA26905-PA 417 GA26905-PA 51..415 11..380 386 29.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17927-PA 381 GM17927-PA 1..380 1..382 1948 96.3 Plus
Dsec\GM20933-PA 390 GM20933-PA 34..390 18..382 431 30.7 Plus
Dsec\GM20903-PA 403 GM20903-PA 33..375 30..377 398 30.6 Plus
Dsec\GM20812-PA 469 GM20812-PA 99..461 10..379 361 29.7 Plus
Dsec\GM11939-PA 341 GM11939-PA 33..333 30..330 351 30.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23656-PA 380 GD23656-PA 1..380 1..382 1966 97.4 Plus
Dsim\GD10459-PA 390 GD10459-PA 34..390 18..382 436 30.9 Plus
Dsim\GD10430-PA 403 GD10430-PA 33..376 30..378 400 30.2 Plus
Dsim\GD10433-PA 598 GD10433-PA 244..595 29..379 361 31.9 Plus
Dsim\GD10271-PA 393 GD10271-PA 32..390 14..382 343 27.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17934-PA 389 GJ17934-PA 6..389 2..382 1323 72 Plus
Dvir\GJ15151-PA 387 GJ15151-PA 31..387 18..382 425 29.8 Plus
Dvir\GJ17545-PA 407 GJ17545-PA 33..377 30..380 395 30.7 Plus
Dvir\GJ14938-PA 519 GJ14938-PA 149..511 10..381 374 31 Plus
Dvir\GJ18186-PA 384 GJ18186-PA 36..382 30..380 370 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18400-PA 402 GK18400-PA 3..374 2..368 1340 73.7 Plus
Dwil\GK12711-PA 180 GK12711-PA 1..180 201..382 798 83 Plus
Dwil\GK20886-PA 391 GK20886-PA 17..388 11..380 458 33.2 Plus
Dwil\GK21791-PA 365 GK21791-PA 9..365 18..382 411 29.5 Plus
Dwil\GK20885-PA 422 GK20885-PA 35..380 30..380 399 30.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18897-PA 380 GE18897-PA 1..380 1..382 1803 92.7 Plus
Dyak\GE19110-PA 390 GE19110-PA 34..390 18..382 433 30.9 Plus
Dyak\nec-PA 469 GE24169-PA 87..449 10..379 379 30.9 Plus
Dyak\GE19080-PA 401 GE19080-PA 33..375 30..377 372 29.2 Plus
Dyak\Spn2-PA 372 GE11095-PA 11..369 8..380 357 29.7 Plus

MIP05602.hyp Sequence

Translation from 133 to 1281

> MIP05602.hyp
MSEAANPTPYDCHIGAGIYHSIATSFAEQNVVVSPLLLEATLSLLFLGSD
GATAEELQKQLRLKQRFASNAKMANFYAAELGNITTDADTFLQLQNRLML
SSESGVADDFQKIAQTYFHATAECVDLEQTEKLRRHISEQILASVGGGSW
KDIHVAGGSSANTLLLLLAANLQSKWFLPFSAYRTGLYEFHSGSQVKSVP
MLFDDDMFVKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEK
QLHDLDLGALQQRMQMEGVQVLLPKFSIDFECSLRQPLKQLGFEEIFAAS
ANFKHLHASANLPIADVLQKLRINLNESGSGSGPELPKNATEYKPIVISN
SSRQKFFRADHPFFFAIRSENVTYLMGHVVEF*

MIP05602.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Spn31A-PA 382 CG4804-PA 1..382 1..382 1940 100 Plus
Spn43Aa-PA 390 CG12172-PA 34..390 18..382 422 30.4 Plus
Spn42Dc-PB 403 CG9455-PB 33..375 30..377 388 29.7 Plus
Spn42Dc-PA 403 CG9455-PA 33..375 30..377 388 29.7 Plus
Spn42De-PB 386 CG9460-PB 14..383 11..379 367 29.8 Plus