Clone MIP05615 Report

Search the DGRC for MIP05615

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:56
Well:15
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG11843-RA
Protein status:MIP05615.pep: gold
Sequenced Size:1064

Clone Sequence Records

MIP05615.complete Sequence

1064 bp assembled on 2009-02-19

GenBank Submission: BT064641.1

> MIP05615.complete
CCGATCGCCACCTGAAGATGAAGATATGGAGGCTGTTCTCCCAGCTGATC
GTTTCGCTGGCATGTGTTTTTGGCCAGCAGCCGGATATGGATGTTGTGGG
ATCTTGCTCTAGATACAAGAAGAGCGTTTTCGAGGAAAGAATCGAGTTCG
GTTTCCTGTTGCCCGGAGCTTCGATTGAGAGTCGGATCATAGACAACTGC
AGGAGCTACACGCCGCTCATCGTCGGTGGTCATCCGGCCCAGCCCAGGGA
ATTTCCGCATATGGCCCGCTTGGGGCGTCGCCCAGATCCGAGCAGCCGTG
CCGACTGGTTTTGTGGTGGCGTTCTGATCAGCGAGCGGTTCGTCTTAACC
GCAGCTCACTGCCTGGAATCGGAAAGGGGAGAGGTGAATGTTGTGCGATT
GGGCGAACTCGACTTCGATTCCTTGGATGAGGATGCGGCGCCCAGAGACT
ATATGGTTGCAGGGTATATAGCCCATCCGGGCTACGAAGATCCGCAGTTC
TACCATGATATAGGTCTTGTCAAACTGACGGAGGCCGTGGTCTTTGACCT
ATATAAGCATCCAGCCTGTCTGCCGTTCCAGGATGAACGCTCTTCCGACT
CCTTCATAGCCGTTGGGTGGGGAAGCACTGGCCTGGCGCTGAAGCCATCC
GCCCAGCTGCTGAAGGTGAAGTTGCAGCGCTACGGAAATTGGGTGTGCAA
GAAACTGCTTACCCGGCAGGTGGAGGAGTTCCCTCGAGGATTCGATGGAA
ACAACCAGCTCTGTGTTGGTTCGGAGATGGCCCAGGACACCTGTAACGGC
GACTCAGGAGGACCTTTGCTAATGTACCATCGGGAATATCCCTGTATGTA
CGTAGTTGTGGGAATCACGTCGGCCGGTTTGTCCTGTGGGTCACCAGGAA
TACCCGGAATCTACACTCGCGTCTATCCTTATTTAGGCTGGATAGCCCGA
ACTTTGGCCACGTTTTAAATTACATCTGGATCTGTAAATTTATATAAATT
TTTTACTAAATACTTAAAAAATTAAATTTAAAAGCATTTAAAAAAAAAAA
AAAAAAAAAAAAAA

MIP05615.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG11843-RA 1231 CG11843-RA 185..1225 1..1041 5205 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:30:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24878434..24878781 692..1039 1740 100 Plus
chr3R 27901430 chr3R 24878043..24878362 375..694 1600 100 Plus
chr3R 27901430 chr3R 24877717..24877991 103..377 1375 100 Plus
chr3R 27901430 chr3R 24877475..24877576 1..102 510 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29055490..29055839 692..1041 1750 100 Plus
3R 32079331 3R 29055099..29055418 375..694 1600 100 Plus
3R 32079331 3R 29054773..29055047 103..377 1375 100 Plus
3R 32079331 3R 29054531..29054632 1..102 510 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28796321..28796670 692..1041 1750 100 Plus
3R 31820162 3R 28795930..28796249 375..694 1600 100 Plus
3R 31820162 3R 28795604..28795878 103..377 1375 100 Plus
3R 31820162 3R 28795362..28795463 1..102 510 100 Plus
Blast to na_te.dros performed on 2019-03-16 19:30:03 has no hits.

MIP05615.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:31:15 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24877475..24877576 1..102 100 -> Plus
chr3R 24877717..24877990 103..376 100 -> Plus
chr3R 24878045..24878360 377..692 100 -> Plus
chr3R 24878435..24878723 693..981 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:55 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 1..951 18..968 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:35:17 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 1..951 18..968 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:53 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 1..951 18..968 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:33:57 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 1..951 18..968 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-19 09:42:32 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 8..975 1..968 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:35:17 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 10..1048 1..1039 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:53 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 10..1048 1..1039 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:33:57 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
CG11843-RA 10..1048 1..1039 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:31:15 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29054531..29054632 1..102 100 -> Plus
3R 29055101..29055416 377..692 100 -> Plus
3R 29055491..29055837 693..1039 100   Plus
3R 29054773..29055046 103..376 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:31:15 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29054531..29054632 1..102 100 -> Plus
3R 29055101..29055416 377..692 100 -> Plus
3R 29055491..29055837 693..1039 100   Plus
3R 29054773..29055046 103..376 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:31:15 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29054531..29054632 1..102 100 -> Plus
3R 29055101..29055416 377..692 100 -> Plus
3R 29055491..29055837 693..1039 100   Plus
3R 29054773..29055046 103..376 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:53 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24880253..24880354 1..102 100 -> Plus
arm_3R 24880495..24880768 103..376 100 -> Plus
arm_3R 24880823..24881138 377..692 100 -> Plus
arm_3R 24881213..24881559 693..1039 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:40 Download gff for MIP05615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28795604..28795877 103..376 100 -> Plus
3R 28795932..28796247 377..692 100 -> Plus
3R 28796322..28796668 693..1039 100   Plus
3R 28795362..28795463 1..102 100 -> Plus

MIP05615.hyp Sequence

Translation from 2 to 967

> MIP05615.hyp
DRHLKMKIWRLFSQLIVSLACVFGQQPDMDVVGSCSRYKKSVFEERIEFG
FLLPGASIESRIIDNCRSYTPLIVGGHPAQPREFPHMARLGRRPDPSSRA
DWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELDFDSLDEDAAPRDY
MVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDS
FIAVGWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGN
NQLCVGSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGI
PGIYTRVYPYLGWIARTLATF*

MIP05615.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11843-PB 316 CG11843-PB 1..316 6..321 1701 100 Plus
CG11843-PA 316 CG11843-PA 1..316 6..321 1701 100 Plus
CG11842-PA 319 CG11842-PA 8..317 7..319 814 50 Plus
CG11841-PA 319 CG11841-PA 1..315 4..319 812 50.3 Plus
CG4927-PC 362 CG4927-PC 93..355 60..314 523 43.5 Plus

MIP05615.pep Sequence

Translation from 2 to 967

> MIP05615.pep
DRHLKMKIWRLFSQLIVSLACVFGQQPDMDVVGSCSRYKKSVFEERIEFG
FLLPGASIESRIIDNCRSYTPLIVGGHPAQPREFPHMARLGRRPDPSSRA
DWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELDFDSLDEDAAPRDY
MVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDS
FIAVGWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGN
NQLCVGSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGI
PGIYTRVYPYLGWIARTLATF*

MIP05615.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16274-PA 314 GF16274-PA 17..314 22..321 1218 73.3 Plus
Dana\GF16272-PA 313 GF16272-PA 7..310 15..319 837 51.1 Plus
Dana\GF16273-PA 323 GF16273-PA 11..321 3..319 816 49.5 Plus
Dana\GF13554-PA 363 GF13554-PA 100..356 66..314 527 43.6 Plus
Dana\GF11395-PA 359 GF11395-PA 90..352 60..314 510 44.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11639-PA 334 GG11639-PA 14..334 1..321 1583 91 Plus
Dere\GG11637-PA 318 GG11637-PA 4..316 11..319 835 49.1 Plus
Dere\GG11636-PA 320 GG11636-PA 4..316 2..319 835 50 Plus
Dere\GG11638-PA 312 GG11638-PA 55..311 61..319 671 49.2 Plus
Dere\GG11232-PA 238 GG11232-PA 3..234 88..320 555 49.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:05:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18680-PA 287 GH18680-PA 2..285 34..320 885 57.8 Plus
Dgri\GH18677-PA 317 GH18677-PA 10..314 11..319 849 51.1 Plus
Dgri\GH18679-PA 328 GH18679-PA 10..324 1..318 835 51.9 Plus
Dgri\GH18678-PA 325 GH18678-PA 10..322 1..319 782 49.8 Plus
Dgri\GH21187-PA 368 GH21187-PA 103..361 65..314 527 45.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11843-PB 316 CG11843-PB 1..316 6..321 1701 100 Plus
CG11843-PA 316 CG11843-PA 1..316 6..321 1701 100 Plus
CG11842-PA 319 CG11842-PA 8..317 7..319 814 50 Plus
CG11841-PA 319 CG11841-PA 1..315 4..319 812 50.3 Plus
CG4927-PC 362 CG4927-PC 93..355 60..314 523 43.5 Plus
CG3700-PA 360 CG3700-PA 96..353 66..314 519 43.1 Plus
snk-PB 435 CG7996-PB 179..429 66..316 443 40.8 Plus
snk-PA 435 CG7996-PA 179..429 66..316 443 40.8 Plus
CG9372-PA 408 CG9372-PA 108..402 4..314 390 34.3 Plus
spirit-PD 393 CG2056-PD 132..361 73..314 369 41.6 Plus
spirit-PC 393 CG2056-PC 132..361 73..314 369 41.6 Plus
spirit-PA 393 CG2056-PA 132..361 73..314 369 41.6 Plus
spirit-PB 393 CG2056-PB 132..361 73..314 369 41.6 Plus
CG14642-PC 392 CG14642-PC 150..390 79..318 336 36.7 Plus
CG14642-PB 392 CG14642-PB 150..390 79..318 336 36.7 Plus
CG11670-PD 404 CG11670-PD 151..390 81..315 336 36.5 Plus
Sp7-PF 391 CG3066-PF 132..389 68..318 334 34.9 Plus
Sp7-PE 391 CG3066-PE 132..389 68..318 334 34.9 Plus
Sp7-PA 391 CG3066-PA 132..389 68..318 334 34.9 Plus
CG7432-PB 721 CG7432-PB 472..715 70..314 319 33.5 Plus
grass-PA 335 CG5896-PA 77..332 73..320 314 32.8 Plus
grass-PB 377 CG5896-PB 119..374 73..320 314 32.8 Plus
CG9737-PA 424 CG9737-PA 116..406 36..314 314 31.4 Plus
CG1299-PB 442 CG1299-PB 188..434 69..314 313 32 Plus
CG1299-PA 511 CG1299-PA 257..503 69..314 313 32 Plus
psh-PA 394 CG6367-PA 144..384 73..314 302 32.7 Plus
CG11313-PC 367 CG11313-PC 116..365 73..318 301 31.5 Plus
CG11313-PD 370 CG11313-PD 116..368 73..318 292 31.2 Plus
CG5909-PA 381 CG5909-PA 119..380 63..318 292 32.5 Plus
CG6865-PB 285 CG6865-PB 28..281 66..318 291 30.6 Plus
MP1-PA 390 CG1102-PA 119..384 65..314 291 32.6 Plus
MP1-PC 399 CG1102-PC 128..393 65..314 291 32.6 Plus
MP1-PE 400 CG1102-PE 129..394 65..314 291 32.6 Plus
CG9733-PB 417 CG9733-PB 154..415 55..318 289 32 Plus
CG9733-PA 418 CG9733-PA 155..416 55..318 289 32 Plus
CG4613-PC 374 CG4613-PC 109..363 51..315 285 32 Plus
CG4613-PB 374 CG4613-PB 109..363 51..315 285 32 Plus
CG30090-PA 291 CG30090-PA 40..274 73..315 283 36.3 Plus
CG8172-PD 371 CG8172-PD 71..367 17..319 281 28.5 Plus
CG30375-PA 398 CG30375-PA 147..389 68..316 281 31.5 Plus
CG3355-PA 314 CG3355-PA 65..307 65..319 280 31.3 Plus
CG8172-PE 545 CG8172-PE 300..541 73..319 279 31.1 Plus
CG8172-PF 561 CG8172-PF 316..557 73..319 279 31.1 Plus
CG4914-PA 374 CG4914-PA 128..360 73..314 276 32.9 Plus
CG11836-PI 281 CG11836-PI 45..274 73..318 275 30.4 Plus
CG11836-PJ 333 CG11836-PJ 97..326 73..318 275 30.4 Plus
Hayan-PA 378 CG6361-PA 107..368 54..314 273 30 Plus
Hayan-PD 637 CG6361-PD 366..627 54..314 273 30 Plus
CG18735-PA 364 CG18735-PA 83..312 73..315 272 29.7 Plus
SPE-PA 400 CG16705-PA 113..398 45..318 270 31.3 Plus
CG4386-PA 372 CG4386-PA 127..354 73..314 269 32.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24190-PA 315 GI24190-PA 19..315 23..321 975 60.3 Plus
Dmoj\GI24189-PA 327 GI24189-PA 13..326 9..321 905 54.4 Plus
Dmoj\GI24188-PA 316 GI24188-PA 3..313 5..319 841 50.5 Plus
Dmoj\GI20473-PA 368 GI20473-PA 103..361 66..314 502 42.7 Plus
Dmoj\GI19100-PA 358 GI19100-PA 99..351 70..314 498 41.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24254-PA 316 GL24254-PA 15..315 21..319 1203 71.4 Plus
Dper\GL24251-PA 317 GL24251-PA 11..314 15..319 871 52.8 Plus
Dper\GL10135-PA 358 GL10135-PA 97..351 65..314 528 42.2 Plus
Dper\GL17283-PA 349 GL17283-PA 81..342 60..314 523 43.3 Plus
Dper\GL24252-PA 183 GL24252-PA 5..181 4..182 467 52 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11230-PA 315 GA11230-PA 2..315 8..321 1233 70.4 Plus
Dpse\GA11228-PA 317 GA11228-PA 13..314 15..319 865 52.1 Plus
Dpse\GA11229-PA 319 GA11229-PA 5..311 4..314 852 51.8 Plus
Dpse\GA17623-PA 358 GA17623-PA 97..351 65..314 526 41.1 Plus
Dpse\GA18531-PA 366 GA18531-PA 98..359 60..314 526 43.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12762-PA 316 GM12762-PA 1..316 6..321 1607 94.6 Plus
Dsec\GM12758-PA 319 GM12758-PA 21..315 22..319 827 52 Plus
Dsec\GM12760-PA 319 GM12760-PA 8..317 7..319 817 50 Plus
Dsec\GM26534-PA 239 GM26534-PA 3..234 88..320 553 48.7 Plus
Dsec\GM21709-PA 362 GM21709-PA 93..359 60..318 532 43.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21409-PA 235 GD21409-PA 1..235 87..321 1201 95.7 Plus
Dsim\GD21407-PA 319 GD21407-PA 21..315 22..319 826 52 Plus
Dsim\GD21042-PA 282 GD21042-PA 30..277 72..320 607 49.2 Plus
Dsim\GD11722-PA 360 GD11722-PA 96..353 66..314 526 44.2 Plus
Dsim\GD11206-PA 362 GD11206-PA 93..359 60..318 517 42.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10537-PA 314 GJ10537-PA 3..313 16..320 969 58 Plus
Dvir\GJ10535-PA 317 GJ10535-PA 13..315 15..320 851 51.8 Plus
Dvir\GJ10536-PA 324 GJ10536-PA 18..322 4..320 845 51.4 Plus
Dvir\GJ22231-PA 372 GJ22231-PA 113..369 70..318 499 40.2 Plus
Dvir\GJ22323-PA 365 GJ22323-PA 97..358 62..314 497 41.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19113-PA 307 GK19113-PA 22..305 30..319 992 60.8 Plus
Dwil\GK22569-PA 313 GK22569-PA 15..302 32..320 869 53.8 Plus
Dwil\GK22568-PA 320 GK22568-PA 1..317 8..319 813 48.3 Plus
Dwil\GK22566-PA 232 GK22566-PA 4..223 98..319 643 51.3 Plus
Dwil\GK16800-PA 330 GK16800-PA 70..327 70..318 555 45.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23830-PA 316 GE23830-PA 1..316 6..321 1550 90.8 Plus
Dyak\GE23828-PA 319 GE23828-PA 17..317 15..319 833 50.7 Plus
Dyak\GE23826-PA 323 GE23826-PA 24..316 24..319 819 51.7 Plus
Dyak\GE23829-PA 297 GE23829-PA 13..295 34..319 725 49.1 Plus
Dyak\GE14247-PA 358 GE14247-PA 96..351 66..314 530 43.8 Plus