Clone MIP05755 Report

Search the DGRC for MIP05755

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:57
Well:55
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG9815-RC
Protein status:MIP05755.pep: gold
Sequenced Size:1126

Clone Sequence Records

MIP05755.complete Sequence

1126 bp assembled on 2009-02-19

GenBank Submission: BT060451.1

> MIP05755.complete
ATTTCATACAACACGAGTCGGTTGCCTCCGAGCTGTCGGCGTTCTACTGT
CGAGCACTCGAAAACTTCACTTCGATTCCGCAACAGAATTGGCTAAAATA
AAACCAAAAAAAACTAAATAAATAAATAATAAAGTAACTGGAGAAAAGAA
GTTTCGCGATTAGGCGGAAATTAGTCGAGCAAATAGTTATTCAAGTGCGA
GTGAAAAGTGGCTGGAATTCGTCAAATCAATTCGATTGAGTGGCCAAAAT
GATTGAGCGGCGCAGTCAGCTGGATAAGATAATCATCACCGCCATGGACC
GCTTCGTCTGGTTCGTCCTACTCGTGGTCATGTCCCACCTGGTCACCGAG
TTCACCCGCGTCTCTGGATATGCGCGTGGCCAGCGCCACGAGCTGGTGCT
GCTGAATGATACGCTGCTGCAGCCCATGCCCGTGCAGAACATGGTGCTGT
ACCCCAGCCAGGAGTACGGCCAGTACCAGCAGCGACCCTCCTCCTCCGCC
TCCGCCTCCGCCTCCGCCTCCGCCTCCTCCTCCATGGGAGCCATGAGCAG
CCTGCAGCAGAACGCGGCATTTTTGCTCAGCAGCTTGGCGGCGGGAGTGA
GTCCGACAAATGGAGCAGCTGCACCCGGCAGCAACGCGGCCATTTTGTCC
CTCGGCGATAGCCAACCGGCTCACACGGCCGAGAGCACGTATCCCATGTT
CAGCTTGCGTCCGCTGATCGACAGCATTTTCGAGATTCCAATTTCGACGC
TGCGTGCTGTTAACAACCTGGTGGGTCGCCTGACCGGCGGGTATCGCCAG
GCGCCGGCGGAAGTGTCGCAAAAATCCGTGGCAGCTGGAACGGCGCTGCC
GCCCGGCAGGCAAAACCCCACGCTGAGTGCCCATCCCAGTGGGCAACGGA
TGCGCGAGGAGATGGCGTAATCTTGGGCCGCATTTTAGCTAGTAGTTGTG
CGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGAT
ATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATTTATGTCCAG
CCACAAGAAAATTCCAAAAAAATATTAGAATGTAGAATAAATGTTATGTG
TAAAATCGAAAAAAAAAAAAAAAAAA

MIP05755.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9815.a 1117 CG9815.a 2..1112 1..1111 5555 100 Plus
CG9815-RB 1072 CG9815-RB 228..1062 277..1111 4175 100 Plus
CG9815-RA 965 CG9815-RA 123..955 279..1111 4165 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:42:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19307835..19308210 1108..733 1820 98.9 Minus
chr2R 21145070 chr2R 19318043..19318324 282..1 1395 99.6 Minus
chr2R 21145070 chr2R 19308262..19308567 734..411 1300 94.1 Minus
chr2R 21145070 chr2R 19308735..19308868 410..277 655 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:42:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23421518..23421896 1111..733 1895 100 Minus
2R 25286936 2R 23421948..23422271 734..411 1620 100 Minus
2R 25286936 2R 23431759..23432040 282..1 1395 99.6 Minus
2R 25286936 2R 23422435..23422568 410..277 670 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23422717..23423095 1111..733 1895 100 Minus
2R 25260384 2R 23423147..23423470 734..411 1620 100 Minus
2R 25260384 2R 23432958..23433239 282..1 1395 99.6 Minus
2R 25260384 2R 23423634..23423767 410..277 670 100 Minus
Blast to na_te.dros performed on 2019-03-16 15:42:47 has no hits.

MIP05755.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:43:31 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19307835..19308208 735..1108 98 <- Minus
chr2R 19308262..19308462 534..734 100 == Minus
chr2R 19308492..19308567 411..486 98 <- Minus
chr2R 19308735..19308866 279..410 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:31:27 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RB 56..699 277..920 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:35:25 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RB 56..699 277..920 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:17:06 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RC 1..672 249..920 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:47:05 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RC 1..672 249..920 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:31:26 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RB 56..887 277..1108 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:35:25 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RB 56..887 277..1108 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:06 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RC 1..1108 1..1108 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:47:05 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9815-RC 1..1108 1..1108 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:31 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23421948..23422271 411..734 100 <- Minus
2R 23421521..23421894 735..1108 100 <- Minus
2R 23422435..23422566 279..410 100 <- Minus
2R 23431763..23432040 1..278 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:31 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23421948..23422271 411..734 100 <- Minus
2R 23421521..23421894 735..1108 100 <- Minus
2R 23422435..23422566 279..410 100 <- Minus
2R 23431763..23432040 1..278 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:31 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23421948..23422271 411..734 100 <- Minus
2R 23421521..23421894 735..1108 100 <- Minus
2R 23422435..23422566 279..410 100 <- Minus
2R 23431763..23432040 1..278 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:06 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19309044..19309417 735..1108 100 <- Minus
arm_2R 19309471..19309794 411..734 100 <- Minus
arm_2R 19309958..19310089 279..410 100 <- Minus
arm_2R 19319286..19319563 1..278 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:51 Download gff for MIP05755.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23422738..23423111 735..1108 100 <- Minus
2R 23423165..23423488 411..734 100 <- Minus
2R 23423652..23423783 279..410 100 <- Minus
2R 23432980..23433257 1..278 100   Minus

MIP05755.pep Sequence

Translation from 248 to 919

> MIP05755.pep
MIERRSQLDKIIITAMDRFVWFVLLVVMSHLVTEFTRVSGYARGQRHELV
LLNDTLLQPMPVQNMVLYPSQEYGQYQQRPSSSASASASASASSSMGAMS
SLQQNAAFLLSSLAAGVSPTNGAAAPGSNAAILSLGDSQPAHTAESTYPM
FSLRPLIDSIFEIPISTLRAVNNLVGRLTGGYRQAPAEVSQKSVAAGTAL
PPGRQNPTLSAHPSGQRMREEMA*

MIP05755.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11850-PA 226 GF11850-PA 5..226 9..223 706 73.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20032-PA 218 GG20032-PA 12..218 10..223 870 84.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20658-PA 200 GH20658-PA 5..200 9..223 530 58.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG9815-PC 223 CG9815-PC 1..223 1..223 1105 100 Plus
CG9815-PB 232 CG9815-PB 18..232 9..223 1059 99.1 Plus
CG9815-PA 219 CG9815-PA 7..219 11..223 1057 100 Plus
CG9815-PD 208 CG9815-PD 1..208 16..223 1036 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19021-PA 203 GI19021-PA 5..203 9..223 523 54 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17562-PA 210 GL17562-PA 5..210 9..223 744 72.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22054-PA 210 GA22054-PA 5..210 9..223 744 72.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15545-PA 216 GM15545-PA 5..216 9..223 931 89.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25049-PA 220 GD25049-PA 5..220 9..223 950 90 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19986-PA 211 GJ19986-PA 5..165 9..195 545 63.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23057-PA 220 GK23057-PA 5..189 9..203 490 59.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11568-PA 219 GE11568-PA 5..219 9..223 889 86.4 Plus

MIP05755.hyp Sequence

Translation from 248 to 919

> MIP05755.hyp
MIERRSQLDKIIITAMDRFVWFVLLVVMSHLVTEFTRVSGYARGQRHELV
LLNDTLLQPMPVQNMVLYPSQEYGQYQQRPSSSASASASASASSSMGAMS
SLQQNAAFLLSSLAAGVSPTNGAAAPGSNAAILSLGDSQPAHTAESTYPM
FSLRPLIDSIFEIPISTLRAVNNLVGRLTGGYRQAPAEVSQKSVAAGTAL
PPGRQNPTLSAHPSGQRMREEMA*

MIP05755.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9815-PC 223 CG9815-PC 1..223 1..223 1105 100 Plus
CG9815-PB 232 CG9815-PB 18..232 9..223 1059 99.1 Plus
CG9815-PA 219 CG9815-PA 7..219 11..223 1057 100 Plus
CG9815-PD 208 CG9815-PD 1..208 16..223 1036 100 Plus