Clone MIP05773 Report

Search the DGRC for MIP05773

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:57
Well:73
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG32191-RB
Protein status:MIP05773.pep: gold
Sequenced Size:2095

Clone Sequence Records

MIP05773.complete Sequence

2095 bp assembled on 2009-05-02

GenBank Submission: BT083381.1

> MIP05773.complete
CCGTGCAAGGCAGTCGAATATTACGCGATTGTCTAATACGTAAGTTGAGT
AACCAAGATGCGGGGCTTATCAGCGTTTCTGCTTTTGCTCTGCCTCCAAC
GGGTGAAGTCGGACGAATCTGCTGCAGCACGGCGCCCCAACATAATCATC
ATTATGGCCGACGACATGGGCTTCGATGATGTGAGCTTTCGAGGCGGACG
GGAGTTTCTAACTCCCAATATCGACGCCCTGGCCTATCACGGTCGTCTAC
TGGATCGGCTCTACGCTCCGGCAATGTGTACTCCATCTCGGGGAGCATTG
CTCAGCGGCCGGTATCCAATACACACGGGCACACAGCACTTTGTAATCAG
CAACGAAGAGCCTTGGGCCCTGACCCTCAATGCCACATTGATGCCGGAGA
TCTTCAAGGAGGCAGGCTACTCCACCAACCTGGTGGGAAAATGGCATCTG
GGCTTCTCGCGCCCGGAATACACGCCCACTCGGCGGGGATTCGATTACCA
CTTCGGCTATTGGGGCGCTTATATAGACTACTTCCAGAGACGATCCAAGA
TGCCGGTGGCCAACTATAGTCTGGGCTACGATTTCCGGCGGAACATGGAG
TTGGAGTGCCGGGATCGTGGGGTTTATGTAACTGATTTGTTAACCGCCGA
GGCGGAACGATTGATCAAAGACCATGCTGATAAGGAGCAACCCCTATTCC
TGATGCTCAGCCACTTGGCTGCCCACACGGCCAACGAGGATGATCCTCTG
CAAGCTCCCGAGGAAGAGATTCAAAAGTTTTCCTACATTAAGGATCCAAA
CCGAAGGAAATATGCAGCGATGATCTCCAAACTGGACCAGAGCGTGGGAC
GTATAATAACCGCTCTGTCTTCTACAGATCAACTGGAGAATAGCATAGTG
ATCTTCTACTCGGACAATGGAGCTCCATCGGTTGGTATGTTCTCTAATAC
GGGTTCAAATTTCCCACTCCGCGGACAGAAGAATACTCCGTGGGAGGGCG
GCGTACGGGTGGCTGGTGCGATTTGGAGCTCCGGGCTTCAGGCACGCGGC
TCCATCTTCCGCCAGCCCTTATACGTCGCCGACTGGTTGCCCACGCTTTC
ACGTGCTGCGGACATAGAGCTGGATAGCTCTCTAAAACTGGACGGGATCG
ATTTGTGGCCCGAGCTATCCGGATCCGCAGATGCTCCCCACGTTCCTCGA
GAGATTTTGCACATCTTGGACGACGTTTGGCGACTTTCTGCTCTTCAAAT
GGGACAGTGGAAGTATGTGAATGGCACCACTGCCTCCGGTCGATACGATT
CGGTGCTCACCTACCGAGAACTGGACGACCTAGATCCCCGCGACAGTCGC
TATGCAGTTACGGTGCGCAACTCCGCCACCTCAAGGGCCCTTTCTCGCTA
CGATTTACGACGACTGACGCAACAACGGATTTCTCTCACCCGTCGATTGG
CCGCAGTCCGTTGTGGAGACCTCCAGAGGTCATGTAATCCTCTGTTGGAG
GAGTGCTTGTACGACATCTTATCGGATCCCTGTGAGCAGAACAATCTGGT
TTACTCCGAGAGGCACTCCGACGTTTTGACCGCCCTGCGAAGACGTGTTC
AAGAACTAAGAGCAAGTGCATCACGCCCGGGCAATCGTGCCAGCATGCCG
GAGGCAGATCCCACATTGCACACCTGCGCCTGGGAGTCCTTTGAAGTGCT
GAAGCCGAGAATCGTTCCCTTGGAATGCGACTACGTAGGCGTACCTTGTT
AATAGGCCAAAAAGTAGAGGAATTAAGTATACGATGCAGACTATTGGATT
ACATCGTAAAGTTGTCAGCATAAATATATCACGTTTAAGTTTTTTTTAGT
TCAATAAAAACAAAAGAGGCAAACAGAACAGTTTCGAAAATAACGATTAT
GCTTTTGCTCTGTAACAGTACAGTTTAAGCCTAACAGTTCCATAACGACT
GTTAATTGTAACTGCATCTGGCAGCTCTGTATTTTGAAATGTAAAATGTT
AGAAATATAACAATTCATGAGTTTTCGAATTTTAGTGATTCAATAAAAAA
TACAAGACTATAAACCTTGAAAACAACAAAAAAAAAAAAAAAAAA

MIP05773.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32191.a 2192 CG32191.a 108..2192 1..2085 10425 100 Plus
CG32191-RA 2153 CG32191-RA 14..1727 1..1714 8570 100 Plus
CG32191-RA 2153 CG32191-RA 1785..2153 1710..2078 1830 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17796464..17797362 1714..816 4420 99.4 Minus
chr3L 24539361 chr3L 17797430..17797919 817..328 2420 99.6 Minus
chr3L 24539361 chr3L 17796039..17796406 2077..1710 1795 99.2 Minus
chr3L 24539361 chr3L 17798223..17798391 169..1 845 100 Minus
chr3L 24539361 chr3L 17798006..17798167 329..168 795 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17806876..17807774 1714..816 4495 100 Minus
3L 28110227 3L 17807842..17808331 817..328 2450 100 Minus
3L 28110227 3L 17806433..17806818 2095..1710 1915 99.7 Minus
3L 28110227 3L 17808636..17808804 169..1 845 100 Minus
3L 28110227 3L 17808419..17808580 329..168 810 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17799976..17800874 1714..816 4495 100 Minus
3L 28103327 3L 17800942..17801431 817..328 2450 100 Minus
3L 28103327 3L 17799533..17799918 2095..1710 1915 99.7 Minus
3L 28103327 3L 17801736..17801904 169..1 845 100 Minus
3L 28103327 3L 17801519..17801680 329..168 810 100 Minus
Blast to na_te.dros performed 2019-03-16 21:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 661..749 1977..2064 126 65.9 Plus
Tom1 410 Tom1 DMTOM1_LTR 410bp 226..323 1772..1869 120 62 Plus

MIP05773.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:10:54 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17796039..17796401 1715..2077 99 <- Minus
chr3L 17796464..17797360 818..1714 99 <- Minus
chr3L 17797430..17797918 329..817 99 <- Minus
chr3L 17798007..17798166 169..328 99 <- Minus
chr3L 17798224..17798391 1..168 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:52:06 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RA 1..1657 58..1714 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:50:33 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RA 1..1657 58..1714 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:32 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RB 1..1695 58..1752 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:24 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RB 1..1695 58..1752 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-02 12:28:58 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RA 1..1705 10..1714 100 -> Plus
CG32191-RA 1768..2130 1715..2077 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:50:32 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RA 1..1705 10..1714 100 -> Plus
CG32191-RA 1768..2130 1715..2077 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:32 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RB 1..2077 1..2077 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:24 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
CG32191-RB 1..2077 1..2077 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:54 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17808420..17808579 169..328 100 <- Minus
3L 17808637..17808804 1..168 100   Minus
3L 17807842..17808330 329..817 100 <- Minus
3L 17806451..17806813 1715..2077 100 <- Minus
3L 17806876..17807772 818..1714 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:54 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17808420..17808579 169..328 100 <- Minus
3L 17808637..17808804 1..168 100   Minus
3L 17807842..17808330 329..817 100 <- Minus
3L 17806451..17806813 1715..2077 100 <- Minus
3L 17806876..17807772 818..1714 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:54 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17808420..17808579 169..328 100 <- Minus
3L 17808637..17808804 1..168 100   Minus
3L 17807842..17808330 329..817 100 <- Minus
3L 17806451..17806813 1715..2077 100 <- Minus
3L 17806876..17807772 818..1714 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:32 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17799551..17799913 1715..2077 100 <- Minus
arm_3L 17799976..17800872 818..1714 100 <- Minus
arm_3L 17800942..17801430 329..817 100 <- Minus
arm_3L 17801520..17801679 169..328 100 <- Minus
arm_3L 17801737..17801904 1..168 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:41:29 Download gff for MIP05773.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17801520..17801679 169..328 100 <- Minus
3L 17801737..17801904 1..168 100   Minus
3L 17799551..17799913 1715..2077 100 <- Minus
3L 17799976..17800872 818..1714 100 <- Minus
3L 17800942..17801430 329..817 100 <- Minus

MIP05773.pep Sequence

Translation from 57 to 1751

> MIP05773.pep
MRGLSAFLLLLCLQRVKSDESAAARRPNIIIIMADDMGFDDVSFRGGREF
LTPNIDALAYHGRLLDRLYAPAMCTPSRGALLSGRYPIHTGTQHFVISNE
EPWALTLNATLMPEIFKEAGYSTNLVGKWHLGFSRPEYTPTRRGFDYHFG
YWGAYIDYFQRRSKMPVANYSLGYDFRRNMELECRDRGVYVTDLLTAEAE
RLIKDHADKEQPLFLMLSHLAAHTANEDDPLQAPEEEIQKFSYIKDPNRR
KYAAMISKLDQSVGRIITALSSTDQLENSIVIFYSDNGAPSVGMFSNTGS
NFPLRGQKNTPWEGGVRVAGAIWSSGLQARGSIFRQPLYVADWLPTLSRA
ADIELDSSLKLDGIDLWPELSGSADAPHVPREILHILDDVWRLSALQMGQ
WKYVNGTTASGRYDSVLTYRELDDLDPRDSRYAVTVRNSATSRALSRYDL
RRLTQQRISLTRRLAAVRCGDLQRSCNPLLEECLYDILSDPCEQNNLVYS
ERHSDVLTALRRRVQELRASASRPGNRASMPEADPTLHTCAWESFEVLKP
RIVPLECDYVGVPC*

MIP05773.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25237-PA 570 GF25237-PA 1..569 1..564 2563 83.3 Plus
Dana\GF24576-PA 583 GF24576-PA 34..560 26..550 1320 48.2 Plus
Dana\GF24578-PA 542 GF24578-PA 1..508 37..543 1302 49.4 Plus
Dana\GF13402-PA 541 GF13402-PA 1..522 1..545 959 37.7 Plus
Dana\GF16526-PA 1145 GF16526-PA 45..384 14..347 165 23.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15780-PA 565 GG15780-PA 1..552 1..552 2766 94 Plus
Dere\GG19815-PA 565 GG19815-PA 1..552 1..552 2757 93.7 Plus
Dere\GG19813-PA 299 GG19813-PA 1..286 267..552 1407 91.6 Plus
Dere\GG13639-PA 584 GG13639-PA 15..551 4..542 1341 48.2 Plus
Dere\GG13640-PA 578 GG13640-PA 6..545 7..543 1325 48.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14468-PA 619 GH14468-PA 23..570 17..564 2294 74.6 Plus
Dgri\GH14469-PA 560 GH14469-PA 23..556 17..550 2179 72.7 Plus
Dgri\GH22700-PA 542 GH22700-PA 31..532 26..545 1005 40.5 Plus
Dgri\GH18078-PA 1191 GH18078-PA 75..425 21..377 177 23.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32191-PC 564 CG32191-PC 1..564 1..564 2967 100 Plus
CG32191-PB 564 CG32191-PB 1..564 1..564 2967 100 Plus
CG7402-PA 579 CG7402-PA 22..545 21..543 1314 49.2 Plus
CG7408-PD 585 CG7408-PD 15..551 4..542 1285 47.3 Plus
CG7408-PC 585 CG7408-PC 15..551 4..542 1285 47.3 Plus
CG7408-PB 585 CG7408-PB 15..551 4..542 1285 47.3 Plus
CG8646-PB 562 CG8646-PB 3..541 7..545 1013 39.5 Plus
CG18278-PA 492 CG18278-PA 10..355 8..357 206 25.7 Plus
CG30059-PA 492 CG30059-PA 10..355 8..357 199 25.3 Plus
Sulf1-PC 1114 CG6725-PC 44..378 17..346 165 23.3 Plus
Sulf1-PB 1114 CG6725-PB 44..378 17..346 165 23.3 Plus
Sulf1-PA 1114 CG6725-PA 44..378 17..346 165 23.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13615-PA 576 GI13615-PA 31..572 23..564 2187 71.4 Plus
Dmoj\GI18487-PA 528 GI18487-PA 17..518 23..545 942 38.5 Plus
Dmoj\GI24652-PA 1155 GI24652-PA 55..394 14..347 167 23.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22750-PA 575 GL22750-PA 1..574 1..564 2474 78.9 Plus
Dper\GL22854-PA 548 GL22854-PA 1..514 33..542 1277 47.8 Plus
Dper\GL22855-PA 559 GL22855-PA 21..522 20..543 1256 48.9 Plus
Dper\GL11077-PA 545 GL11077-PA 15..526 16..545 967 37.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16747-PA 575 GA16747-PA 1..574 1..564 2492 79.1 Plus
Dpse\GA23896-PA 577 GA23896-PA 21..544 20..543 1363 51.3 Plus
Dpse\GA23895-PA 548 GA23895-PA 1..514 33..542 1278 47.8 Plus
Dpse\GA21235-PA 545 GA21235-PA 15..526 16..545 968 37.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24306-PA 554 GM24306-PA 1..552 1..552 2878 97.3 Plus
Dsec\GM25726-PA 579 GM25726-PA 22..545 21..543 1327 48.8 Plus
Dsec\GM25725-PA 585 GM25725-PA 15..551 4..542 1314 47.3 Plus
Dsec\GM21416-PA 542 GM21416-PA 3..521 7..545 985 38.9 Plus
Dsec\GM20282-PA 492 GM20282-PA 1..359 1..363 215 25.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:03:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12374-PA 554 GD12374-PA 1..552 1..552 2878 97.3 Plus
Dsim\GD14734-PA 579 GD14734-PA 22..545 21..543 1329 49 Plus
Dsim\GD14733-PA 585 GD14733-PA 15..551 4..542 1316 47.1 Plus
Dsim\GD10911-PA 633 GD10911-PA 3..442 7..469 882 39.9 Plus
Dsim\GD20299-PA 1114 GD20299-PA 44..379 17..347 167 23.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13952-PA 574 GJ13952-PA 20..572 16..564 2270 73.4 Plus
Dvir\GJ21349-PA 531 GJ21349-PA 20..521 26..545 977 40.2 Plus
Dvir\GJ19825-PA 324 GJ19825-PA 2..306 3..306 913 55.8 Plus
Dvir\GJ19826-PA 301 GJ19826-PA 11..263 295..543 374 34.9 Plus
Dvir\GJ23505-PA 1135 GJ23505-PA 55..413 14..377 173 23.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11604-PA 567 GK11604-PA 18..566 15..564 2359 76.4 Plus
Dwil\GK20325-PA 550 GK20325-PA 1..543 1..543 1391 48.9 Plus
Dwil\GK20324-PA 525 GK20324-PA 1..512 33..542 1339 50 Plus
Dwil\GK15669-PA 556 GK15669-PA 1..525 1..545 958 37.7 Plus
Dwil\GK13512-PA 1148 GK13512-PA 44..404 14..370 167 23.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22117-PA 565 GE22117-PA 1..552 1..552 2802 95.3 Plus
Dyak\GE19935-PA 577 GE19935-PA 22..545 21..543 1338 49.3 Plus
Dyak\GE19934-PA 591 GE19934-PA 15..551 4..542 1337 47.6 Plus
Dyak\GE12487-PA 544 GE12487-PA 3..521 7..545 982 38.8 Plus
Dyak\GE13365-PA 492 GE13365-PA 10..359 8..363 217 24.9 Plus

MIP05773.hyp Sequence

Translation from 57 to 1751

> MIP05773.hyp
MRGLSAFLLLLCLQRVKSDESAAARRPNIIIIMADDMGFDDVSFRGGREF
LTPNIDALAYHGRLLDRLYAPAMCTPSRGALLSGRYPIHTGTQHFVISNE
EPWALTLNATLMPEIFKEAGYSTNLVGKWHLGFSRPEYTPTRRGFDYHFG
YWGAYIDYFQRRSKMPVANYSLGYDFRRNMELECRDRGVYVTDLLTAEAE
RLIKDHADKEQPLFLMLSHLAAHTANEDDPLQAPEEEIQKFSYIKDPNRR
KYAAMISKLDQSVGRIITALSSTDQLENSIVIFYSDNGAPSVGMFSNTGS
NFPLRGQKNTPWEGGVRVAGAIWSSGLQARGSIFRQPLYVADWLPTLSRA
ADIELDSSLKLDGIDLWPELSGSADAPHVPREILHILDDVWRLSALQMGQ
WKYVNGTTASGRYDSVLTYRELDDLDPRDSRYAVTVRNSATSRALSRYDL
RRLTQQRISLTRRLAAVRCGDLQRSCNPLLEECLYDILSDPCEQNNLVYS
ERHSDVLTALRRRVQELRASASRPGNRASMPEADPTLHTCAWESFEVLKP
RIVPLECDYVGVPC*

MIP05773.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG32191-PC 564 CG32191-PC 1..564 1..564 2967 100 Plus
CG32191-PB 564 CG32191-PB 1..564 1..564 2967 100 Plus
CG7402-PA 579 CG7402-PA 22..545 21..543 1314 49.2 Plus
CG7408-PD 585 CG7408-PD 15..551 4..542 1285 47.3 Plus
CG7408-PC 585 CG7408-PC 15..551 4..542 1285 47.3 Plus