BDGP Sequence Production Resources |
Search the DGRC for MIP05859
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 58 |
Well: | 59 |
Vector: | pOT2|pOTB7_DraIII |
Associated Gene/Transcript | CG42853-RA |
Protein status: | MIP05859.pep: gold |
Sequenced Size: | 1018 |
1018 bp assembled on 2009-02-23
GenBank Submission: BT066309.1
> MIP05859.complete TTTTTGTAATTTGTATATCTTCTCAGTACTAAAGGTCTTAAAAACTCAAA AAAAAAAAAAATATGGCCACAAGCGCGAACTCTGTTCAAGTTTCTGGAGC CGGTGCGGAGGTAAACGAAGCTAAACTCATCTGCATCTGGGAGGGAATAA CTGAGCTGATCCTGTGGCGCAACTGGATAAAGTCGATGCTTGTATTCGTA ATGCTACAGACCATAATTTATGATCTGCTTTCTGAACCGCTTGTGTTCGT GGTGAGCGTATGGGCTTTGATTATCATGGTCATATCAATGGGGTACCGTT TTTTGGTACAGTACACTAATACCCATATCCAGAACAACAGCTATCCGAAA TATCTTGACATAGACCTAAGAATCTCCCAGGAGTTATCTAAGCAACTGGG TGTTCTAGTTTCAACCAAAGTTGTTGCGTTTCTAAATAATCTACGAGAGA TATTACTAGTAAAGAGCTTTTCGAAATCATTCAAGTGGTTTGGCCTTCTC CTAATAATTAGCAAACTTGGAAAGCAGATTAACTTTCTAATTGTTGGCCA ATTAGGGCTGTTTCTACTCTTCACAATTCCCAAAATGTGTGAGATGAATA GACGTTCATCAAATATTGTACAACTTCCTAAATTTAATAAACAATATCAA ATTACCAAAGTAAACGCTTCGACCGAAACCCAGAATGCATTGGACATGGA ATCCTTAAAAGAGTGCAACGAGGACACCATAAAGCTAATTGAAAAGCAAC CAGAAGGGATGGATCTCTCACTCGGCTGTGATATTACCAAGGAATCCCAG AATGCGGCTGATGATCTTAAAGCCTTTAAAGTAAAGGAGGAAATAGACAT TGATGCTTTTGAGCGACTTGCCGATTCCTGGTCCGACGAAGATACACTTA CTGATCAAAAAAATTAATTCAAGACAATTCAAATAATTTATTTTTATATA TTGTGAAGCGTTTGGATAAATAAAACTCCTAGGGGCACTGTGCGGAACAA CAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MB7.chr3L.pasa.9032.a | 1060 | MB7.chr3L.pasa.9032.a | 66..1060 | 1..995 | 4975 | 100 | Plus |
CG7341-RA | 1434 | CG7341-RA | 1358..1434 | 1002..926 | 385 | 100 | Minus |
CG7341-RB | 1453 | CG7341-RB | 1377..1453 | 1002..926 | 385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1029..1088 | 954..896 | 117 | 68.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18110613..18111058 | 556..1001 | 94 | <- | Minus |
chr3L | 18111116..18111670 | 1..555 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..855 | 63..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..855 | 63..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..855 | 63..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7341-RB | 1378..1453 | 926..1001 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..1001 | 1..1001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..1001 | 1..1001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42853-RA | 1..1001 | 1..1001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18120932..18121377 | 556..1001 | 100 | <- | Minus |
3L | 18121435..18121989 | 1..555 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18120932..18121377 | 556..1001 | 100 | <- | Minus |
3L | 18121435..18121989 | 1..555 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18120932..18121377 | 556..1001 | 100 | <- | Minus |
3L | 18121435..18121989 | 1..555 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18114032..18114477 | 556..1001 | 100 | <- | Minus |
arm_3L | 18114535..18115089 | 1..555 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18114032..18114477 | 556..1001 | 100 | <- | Minus |
3L | 18114535..18115089 | 1..555 | 100 | Minus |
Translation from 62 to 916
> MIP05859.pep MATSANSVQVSGAGAEVNEAKLICIWEGITELILWRNWIKSMLVFVMLQT IIYDLLSEPLVFVVSVWALIIMVISMGYRFLVQYTNTHIQNNSYPKYLDI DLRISQELSKQLGVLVSTKVVAFLNNLREILLVKSFSKSFKWFGLLLIIS KLGKQINFLIVGQLGLFLLFTIPKMCEMNRRSSNIVQLPKFNKQYQITKV NASTETQNALDMESLKECNEDTIKLIEKQPEGMDLSLGCDITKESQNAAD DLKAFKVKEEIDIDAFERLADSWSDEDTLTDQKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10829-PA | 294 | GF10829-PA | 25..284 | 24..276 | 329 | 33.7 | Plus |
Dana\GF17296-PA | 259 | GF17296-PA | 17..232 | 27..263 | 186 | 24.9 | Plus |
Dana\GF14162-PA | 596 | GF14162-PA | 401..557 | 29..182 | 150 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15756-PA | 68 | GG15756-PA | 1..68 | 212..284 | 210 | 65.8 | Plus |
Dere\GG25105-PA | 246 | GG25105-PA | 3..196 | 29..217 | 170 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17123-PA | 245 | GH17123-PA | 4..162 | 31..185 | 151 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42853-PA | 284 | CG42853-PA | 1..284 | 1..284 | 1433 | 100 | Plus |
Rtnl2-PC | 255 | CG1279-PC | 15..226 | 25..240 | 182 | 25.9 | Plus |
Rtnl2-PB | 255 | CG1279-PB | 15..226 | 25..240 | 182 | 25.9 | Plus |
Rtnl1-PL | 222 | CG33113-PL | 7..182 | 11..182 | 150 | 25 | Plus |
Rtnl1-PG | 224 | CG33113-PG | 26..184 | 27..182 | 146 | 25.2 | Plus |
Rtnl1-PD | 224 | CG33113-PD | 26..184 | 27..182 | 146 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11728-PA | 258 | GI11728-PA | 15..162 | 32..175 | 172 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12168-PA | 319 | GL12168-PA | 29..183 | 32..180 | 212 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11813-PB | 321 | GA11813-PB | 29..183 | 32..180 | 212 | 30.3 | Plus |
Dpse\GA11813-PA | 298 | GA11813-PA | 6..160 | 32..180 | 211 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10472-PA | 238 | GM10472-PA | 6..215 | 32..240 | 178 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19473-PA | 238 | GD19473-PA | 6..215 | 32..240 | 169 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11400-PA | 265 | GJ11400-PA | 15..212 | 26..214 | 214 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11074-PA | 247 | GK11074-PA | 19..181 | 32..191 | 188 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25782-PA | 264 | GE25782-PA | 15..171 | 25..177 | 162 | 29.8 | Plus |
Translation from 62 to 916
> MIP05859.hyp MATSANSVQVSGAGAEVNEAKLICIWEGITELILWRNWIKSMLVFVMLQT IIYDLLSEPLVFVVSVWALIIMVISMGYRFLVQYTNTHIQNNSYPKYLDI DLRISQELSKQLGVLVSTKVVAFLNNLREILLVKSFSKSFKWFGLLLIIS KLGKQINFLIVGQLGLFLLFTIPKMCEMNRRSSNIVQLPKFNKQYQITKV NASTETQNALDMESLKECNEDTIKLIEKQPEGMDLSLGCDITKESQNAAD DLKAFKVKEEIDIDAFERLADSWSDEDTLTDQKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42853-PA | 284 | CG42853-PA | 1..284 | 1..284 | 1433 | 100 | Plus |
Rtnl2-PC | 255 | CG1279-PC | 15..226 | 25..240 | 182 | 25.9 | Plus |
Rtnl2-PB | 255 | CG1279-PB | 15..226 | 25..240 | 182 | 25.9 | Plus |
Rtnl1-PL | 222 | CG33113-PL | 7..182 | 11..182 | 150 | 25 | Plus |
Rtnl1-PG | 224 | CG33113-PG | 26..184 | 27..182 | 146 | 25.2 | Plus |