Clone Sequence Records
MIP05874.complete Sequence
1149 bp assembled on 2009-02-21
GenBank Submission: BT066310.1
> MIP05874.complete
CGGAGTGTAATTGCGAGTGTCCGTGCCCCGTTTCCGATTCCGCTGCACGT
TTCCGTGATGGAATATGTATACACCTGCGAAAAGAAGCGAAAACAATCAT
ATCGTTGAGGCGTCATTCGTTGTGCAATTCCCCCGCCCATCGTAATGCTC
AACAAAAGTCAAATAAATGCAGTAAATACAAGCCAAAAAACACATTGGTC
GAATGCCACACGTGAGATTTGGCTACAATGGAAAGCCAGGAGCACCAAGA
ACGGGTATGATAACCGCACTTGAGGTAAAGAAATGCCTCAATATAACAAT
CCTAAAAAATTTGAATAAAAAAAAGTTATTGGGTGTTTGGTTTGCATACG
CAACAACACCTGTCAATATACCCGCCTACAAACGTCGTTGTTCATCGTAT
AATGTTCAGGATAGTACCTTTTTCGATACCCATATCGTGTATACGGACTA
CAAGCACGTGACTGTCACCTATGACTGCAAGTACAACGATATGACCATGC
TGCATGACCTTAAAGTCCGCGTTTTAACACGCACTCGAACCCCTGTGCTC
AAAGATTTAAACCAGGCCTTATACTTTCTAGAGGAACATGCATTTTCAAT
CAAAAACTTGGATTTCCTCAAGTCAAAAGCATTCTGCTTTGAGTGGTACG
TGTTGAAATACCACTCCAAAACACGACCGGGTCGATTCAATGCGCCCATC
ATCCGGGTTTGGGATCATTGACGATGTGGCCGTTGATGACAGCATGAATT
AATTGCATAACTATTGCTAATTATTACAACATAATCAATGAAGGAGCTGC
AGCCGTGGAGAGGAAATCGTATAACTTAATTAGCCTGGACTGGCCCAACC
AAAATCAATTACCAACGACAGTCTCACTTGACTGATTGGGCCCGGGTCCT
TCAAGGGAACCAATTGTGCTGATTTCAGTGTCCTTGCTCCGAAAACTCAC
ACACAAATTTATATAAAAAGATATACATGTACATATATTGACACGAAAAG
AAATCTAGATATCCTACACCATTGATTTCGTTTCCATTAATGTAAAAGTA
TTTAGCAAACATGTTGATAGACTTAAAAAACACCTTTCCTAAAATATATT
ATACATCTAATACATCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP05874.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DMG8-chr2L.24.001.a | 1116 | DMG8-chr2L.24.001.a | 1..1116 | 1..1116 | 5565 | 99.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:49:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 13118866..13119475 | 510..1119 | 3005 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 13118005..13118241 | 4..240 | 1140 | 98.7 | Plus |
chr2L | 23010047 | chr2L | 13118704..13118800 | 417..513 | 470 | 99 | Plus |
chr2L | 23010047 | chr2L | 13118551..13118643 | 324..416 | 465 | 100 | Plus |
chr2L | 23010047 | chr2L | 13118404..13118491 | 238..325 | 440 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13120158..13120773 | 510..1125 | 3065 | 99.8 | Plus |
2L | 23513712 | 2L | 13119294..13119533 | 1..240 | 1200 | 100 | Plus |
2L | 23513712 | 2L | 13119996..13120092 | 417..513 | 470 | 99 | Plus |
2L | 23513712 | 2L | 13119843..13119935 | 324..416 | 465 | 100 | Plus |
2L | 23513712 | 2L | 13119696..13119783 | 238..325 | 440 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13120158..13120773 | 510..1125 | 3065 | 99.8 | Plus |
2L | 23513712 | 2L | 13119294..13119533 | 1..240 | 1200 | 100 | Plus |
2L | 23513712 | 2L | 13119996..13120092 | 417..513 | 470 | 98.9 | Plus |
2L | 23513712 | 2L | 13119843..13119935 | 324..416 | 465 | 100 | Plus |
2L | 23513712 | 2L | 13119696..13119783 | 238..325 | 440 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 20:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 1713..1799 | 1033..1118 | 125 | 64.8 | Plus |
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 474..505 | 988..957 | 115 | 84.4 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 5506..5597 | 948..1041 | 114 | 61.1 | Plus |
MIP05874.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:50:40 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 13118002..13118240 | 1..239 | 98 | -> | Plus |
chr2L | 13118406..13118491 | 240..325 | 100 | -> | Plus |
chr2L | 13118553..13118643 | 326..416 | 100 | -> | Plus |
chr2L | 13118704..13118796 | 417..509 | 100 | -> | Plus |
chr2L | 13118866..13119475 | 510..1119 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:37:24 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..519 | 203..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:24:19 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..519 | 203..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:33 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..519 | 203..721 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:37:23 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..1119 | 1..1119 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:24:19 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..1119 | 1..1119 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:33 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 1..1119 | 1..1119 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:40 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13119996..13120088 | 417..509 | 100 | -> | Plus |
2L | 13119294..13119532 | 1..239 | 100 | -> | Plus |
2L | 13119698..13119783 | 240..325 | 100 | -> | Plus |
2L | 13119845..13119935 | 326..416 | 100 | -> | Plus |
2L | 13120158..13120767 | 510..1119 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:40 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13119996..13120088 | 417..509 | 100 | -> | Plus |
2L | 13119294..13119532 | 1..239 | 100 | -> | Plus |
2L | 13119698..13119783 | 240..325 | 100 | -> | Plus |
2L | 13119845..13119935 | 326..416 | 100 | -> | Plus |
2L | 13120158..13120767 | 510..1119 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:40 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13119996..13120088 | 417..509 | 100 | -> | Plus |
2L | 13119294..13119532 | 1..239 | 100 | -> | Plus |
2L | 13119698..13119783 | 240..325 | 100 | -> | Plus |
2L | 13119845..13119935 | 326..416 | 100 | -> | Plus |
2L | 13120158..13120767 | 510..1119 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:24:19 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13119294..13119532 | 1..239 | 100 | -> | Plus |
arm_2L | 13119698..13119783 | 240..325 | 100 | -> | Plus |
arm_2L | 13119845..13119935 | 326..416 | 100 | -> | Plus |
arm_2L | 13119996..13120088 | 417..509 | 100 | -> | Plus |
arm_2L | 13120158..13120767 | 510..1119 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:11:09 Download gff for
MIP05874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13119294..13119532 | 1..239 | 100 | -> | Plus |
2L | 13119698..13119783 | 240..325 | 100 | -> | Plus |
2L | 13119845..13119935 | 326..416 | 100 | -> | Plus |
2L | 13119996..13120088 | 417..509 | 100 | -> | Plus |
2L | 13120158..13120767 | 510..1119 | 99 | | Plus |
MIP05874.pep Sequence
Translation from 202 to 720
> MIP05874.pep
MPHVRFGYNGKPGAPRTGMITALEVKKCLNITILKNLNKKKLLGVWFAYA
TTPVNIPAYKRRCSSYNVQDSTFFDTHIVYTDYKHVTVTYDCKYNDMTML
HDLKVRVLTRTRTPVLKDLNQALYFLEEHAFSIKNLDFLKSKAFCFEWYV
LKYHSKTRPGRFNAPIIRVWDH*
MIP05874.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23810-PA | 147 | GG23810-PA | 22..112 | 13..103 | 380 | 74.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43050-PA | 172 | CG43050-PA | 1..172 | 1..172 | 936 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:03:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI18093-PA | 198 | GI18093-PA | 78..189 | 23..165 | 228 | 35 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:03:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL24736-PA | 176 | GL24736-PA | 8..176 | 5..172 | 246 | 32.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:03:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA28955-PA | 230 | GA28955-PA | 80..230 | 25..172 | 245 | 34.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:03:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM10124-PA | 142 | GM10124-PA | 78..107 | 73..102 | 137 | 80 | Plus |
MIP05874.hyp Sequence
Translation from 202 to 720
> MIP05874.hyp
MPHVRFGYNGKPGAPRTGMITALEVKKCLNITILKNLNKKKLLGVWFAYA
TTPVNIPAYKRRCSSYNVQDSTFFDTHIVYTDYKHVTVTYDCKYNDMTML
HDLKVRVLTRTRTPVLKDLNQALYFLEEHAFSIKNLDFLKSKAFCFEWYV
LKYHSKTRPGRFNAPIIRVWDH*
MIP05874.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:04:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43050-PA | 172 | CG43050-PA | 1..172 | 1..172 | 936 | 100 | Plus |