Clone MIP05907 Report

Search the DGRC for MIP05907

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:59
Well:7
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG31823-RA
Protein status:MIP05907.pep: gold
Sequenced Size:1741

Clone Sequence Records

MIP05907.complete Sequence

1741 bp assembled on 2009-02-21

GenBank Submission: BT072933.1

> MIP05907.complete
CTAAAAGCAGCGTCAGATCAGTGCGCATTTCCCGCCGAAGCGGGCAGTTT
AGTTCTACTTTCCTTTCCATTGCATTGTGATCATCGCGATTATGTACCTC
AATGAGAATAAAAATCGTATATGGGCGTGTGCCCTGTGTTTTTTTTTATC
ACTGATCTGCGTGCAAGGACGTGTTGGTCTGGGACCTGGAGTACAGGAAT
GGGACTATGTGGAAGTTCGGAAGGGCGCTCACCTCTTTTACTGGCTTCTA
TACACCACTGCCAATGTATCTCATTTCATAGAGAGGCCGCTGGTAATCTG
GCTGCAAGGGGGACCCGGTGTTGCATCCACCGGCAGCGGGATATTTGAGC
AGCTTGGACCCATCGACATCGAGGGCAAAACGCGGGAAAGCAGTTGGTTG
AAGCACGTGAATGTTCTTTTTGTGGACAGTCCGGTGGGCACGGGATTCGC
TTACGTTGAGCATCACAGCCTCTATGCCAGAAACAACAGGCAGATAGCCC
TCGATCTTGTCCAGTTGATGAAGCAGTTTCTTACGAAGTATCCCGATTTC
CGAAAGGTGCCCCTGCATATATTCTCCGAGAGCTATGGCGGAAAAATGGC
TCCCGAATTCGCGCTGGAATTGCATTTGGCGAAGAAAGTAGGCGAATTAG
AGTGCGATCTGAAATCCGTGGTAGTAGGCAATCCATGGACCTCTCCACTG
GACAGTATTCTGTCCTATGCCCCCTTTCTGCTCCAATCGGGCATTGTGGA
TGATGACGGTTATCGTCGAATATCGCGACTGGCCGGCGAGTTAGCTGCAC
TTGTCTATGGCGGAAAGTGGTTACGCGCCTTGATGAAGGCGACCGAAGTT
CAGGATGAGATCTCCGCCAGTGCGGGCGGAGTCTTCATCTACAACACCCA
GCGGCGGGTTCACGTGGACGAGGTCTACCGGTACGGCGAAGATCCGCAAA
TGAGCGACTTTATGCGATCCAATGTGACTAAAGCACTGGGGCTAGGCAAT
ATGCCCGTGTGGATGGAACAAAACTCGACAGTCTTCGAACGACTCAGTCA
GGATATTTTTAAGCCAGCGAATCAAATAGTTACCAAATTGCTGGAAGAGA
CGCCGATACAGGTGGGTATTTATTCTGGCATTCTGGACCTACTGTGCGCA
ACACCCGGCACCGTTAACTGGATCCGCCGACTTAAGTGGCGCCGCAGTTT
GGAGTATGCCAAGGCACCCCGTACCGCCATTCGGATTGAAGGGATGCTGG
AGGGGTACGAAAAGCACGGCGGAAAACTCAGTATGTTCTGGGTCTTTCGG
GCGGGACATCTGGTACAGCAGGAGAACCCGGCGGCAATGGCGTATATTTT
AAGGTACTTTACCAGCTATGGATAGTGTACAAATTCTTTCGAATAAAGTT
ACAGAGTTTGCACGACAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGT
TCTTGAGCAAGCAGCCCTCGTTCGTGTCGCGCAACCTGGTGGCCGTCGTG
ATGATCCCCAGTCTGGTGGGGATCCATCTGGGCTGGAGCTACATGCAGAG
CAACCGAAAACTGGTCACGGAGGCGGAACAGATCGAGATGCCGCCGGTCA
CGTTTGCCAGGTTTGTGTGGAACAAGCTAACGGGCGCAGGAAGTTCGACG
GAATGACAAACCCTCTGGTGATGAGCTTAAGACATACAATCTATTTATTG
TATAGAATAATTAAAACTACATGCAAAAAAAAAAAAAAAAA

MIP05907.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31823-RA 1410 CG31823-RA 1..1386 33..1418 6930 100 Plus
CG15922-RA 566 CG15922-RA 288..561 1454..1727 1370 100 Plus
CG5180-RA 1602 CG5180-RA 1548..1602 1727..1673 275 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15898081..15898994 1079..166 4555 99.9 Minus
chr2L 23010047 chr2L 15897665..15898006 1418..1077 1695 99.7 Minus
chr2L 23010047 chr2L 15899159..15899326 168..1 840 100 Minus
chr3R 27901430 chr3R 16383812..16383960 1602..1454 745 100 Minus
chr3R 27901430 chr3R 16383629..16383751 1724..1602 615 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15899293..15900206 1079..166 4570 100 Minus
2L 23513712 2L 15898877..15899218 1418..1077 1710 100 Minus
2L 23513712 2L 15900370..15900537 168..1 840 100 Minus
3R 32079331 3R 20559898..20560046 1602..1454 745 100 Minus
3R 32079331 3R 20559712..20559837 1727..1602 630 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15899293..15900206 1079..166 4570 100 Minus
2L 23513712 2L 15898877..15899218 1418..1077 1710 100 Minus
2L 23513712 2L 15900370..15900537 168..1 840 100 Minus
3R 31820162 3R 20300729..20300877 1602..1454 745 100 Minus
3R 31820162 3R 20300543..20300668 1727..1602 630 100 Minus
Blast to na_te.dros performed on 2019-03-16 20:15:55 has no hits.

MIP05907.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:16:43 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15897660..15898003 1080..1423 99 <- Minus
chr2L 15898081..15898992 168..1079 99 <- Minus
chr2L 15899160..15899326 1..167 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:17 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1284 92..1375 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:37:09 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1284 92..1375 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:04:08 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1284 92..1375 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:56:12 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1284 92..1375 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-21 14:40:59 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1325 51..1375 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:37:09 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1325 51..1375 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:04:08 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1403 14..1416 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:12 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31823-RA 1..1403 14..1416 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:43 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15898873..15899215 1080..1420 99 <- Minus
2L 15899293..15900204 168..1079 100 <- Minus
2L 15900371..15900537 1..167 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:43 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15898873..15899215 1080..1420 99 <- Minus
2L 15899293..15900204 168..1079 100 <- Minus
2L 15900371..15900537 1..167 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:43 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15898873..15899215 1080..1420 99 <- Minus
2L 15899293..15900204 168..1079 100 <- Minus
2L 15900371..15900537 1..167 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:04:08 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15900371..15900537 1..167 100   Minus
arm_2L 15898873..15899215 1080..1420 99 <- Minus
arm_2L 15899293..15900204 168..1079 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:52 Download gff for MIP05907.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15898873..15899215 1080..1420 99 <- Minus
2L 15899293..15900204 168..1079 100 <- Minus
2L 15900371..15900537 1..167 100   Minus

MIP05907.pep Sequence

Translation from 91 to 1374

> MIP05907.pep
MYLNENKNRIWACALCFFLSLICVQGRVGLGPGVQEWDYVEVRKGAHLFY
WLLYTTANVSHFIERPLVIWLQGGPGVASTGSGIFEQLGPIDIEGKTRES
SWLKHVNVLFVDSPVGTGFAYVEHHSLYARNNRQIALDLVQLMKQFLTKY
PDFRKVPLHIFSESYGGKMAPEFALELHLAKKVGELECDLKSVVVGNPWT
SPLDSILSYAPFLLQSGIVDDDGYRRISRLAGELAALVYGGKWLRALMKA
TEVQDEISASAGGVFIYNTQRRVHVDEVYRYGEDPQMSDFMRSNVTKALG
LGNMPVWMEQNSTVFERLSQDIFKPANQIVTKLLEETPIQVGIYSGILDL
LCATPGTVNWIRRLKWRRSLEYAKAPRTAIRIEGMLEGYEKHGGKLSMFW
VFRAGHLVQQENPAAMAYILRYFTSYG*

MIP05907.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14968-PA 428 GF14968-PA 5..428 4..427 1756 74.8 Plus
Dana\GF24074-PA 439 GF24074-PA 6..439 15..427 1120 49.1 Plus
Dana\GF24075-PA 446 GF24075-PA 7..446 10..427 1101 48.6 Plus
Dana\GF14967-PA 430 GF14967-PA 3..424 13..426 891 41.4 Plus
Dana\GF17355-PA 478 GF17355-PA 89..476 40..426 403 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24186-PA 427 GG24186-PA 1..427 1..427 2086 90.4 Plus
Dere\GG14645-PA 439 GG14645-PA 17..439 25..427 1133 50.6 Plus
Dere\GG14646-PA 446 GG14646-PA 20..446 23..427 1092 49.2 Plus
Dere\GG24185-PA 425 GG24185-PA 3..419 16..426 895 42.1 Plus
Dere\GG11057-PA 241 GG11057-PA 1..226 143..403 806 61.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11350-PA 665 GH11350-PA 266..665 27..427 1522 68.9 Plus
Dgri\GH16040-PA 446 GH16040-PA 16..446 18..427 1118 48 Plus
Dgri\GH16039-PA 442 GH16039-PA 5..442 8..427 1108 47.3 Plus
Dgri\GH21639-PA 479 GH21639-PA 81..477 33..426 401 28.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG31823-PA 427 CG31823-PA 1..427 1..427 2255 100 Plus
CG32483-PA 439 CG32483-PA 9..439 15..427 1122 49.9 Plus
hiro-PA 446 CG3344-PA 11..446 14..427 1112 49.8 Plus
CG31821-PB 427 CG31821-PB 3..421 16..426 868 41.2 Plus
CG31821-PA 427 CG31821-PA 3..421 16..426 868 41.2 Plus
CG4572-PD 482 CG4572-PD 83..480 33..426 391 27.7 Plus
CG4572-PB 482 CG4572-PB 83..480 33..426 391 27.7 Plus
CG4572-PA 482 CG4572-PA 83..480 33..426 391 27.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17365-PA 422 GI17365-PA 22..422 25..427 1498 68 Plus
Dmoj\GI12302-PA 442 GI12302-PA 9..442 14..427 1117 47.9 Plus
Dmoj\GI12303-PA 442 GI12303-PA 8..442 11..427 1112 48.6 Plus
Dmoj\GI12304-PA 450 GI12304-PA 19..443 23..427 1110 49.3 Plus
Dmoj\GI20092-PA 478 GI20092-PA 85..476 39..426 449 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15326-PA 426 GL15326-PA 10..426 11..427 1695 73.4 Plus
Dper\GL20837-PA 439 GL20837-PA 9..439 15..427 1112 48.3 Plus
Dper\GL20838-PA 445 GL20838-PA 6..445 10..427 1110 48.9 Plus
Dper\GL15325-PA 426 GL15325-PA 2..421 10..426 906 43.7 Plus
Dper\GL15319-PA 415 GL15319-PA 2..415 8..427 858 42.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16505-PA 426 GA16505-PA 10..426 11..427 1695 73.4 Plus
Dpse\GA17392-PA 445 GA17392-PA 6..445 10..427 1110 48.9 Plus
Dpse\GA16937-PA 439 GA16937-PA 11..439 16..427 1107 47.9 Plus
Dpse\GA16504-PA 426 GA16504-PA 2..421 10..426 907 43.7 Plus
Dpse\GA28793-PA 399 GA28793-PA 21..399 26..427 747 41.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17924-PA 427 GM17924-PA 1..427 1..427 2208 96 Plus
Dsec\GM14261-PA 446 GM14261-PA 20..446 23..427 1113 50.1 Plus
Dsec\GM17923-PA 425 GM17923-PA 3..419 16..426 873 41.9 Plus
Dsec\GM14260-PA 262 GM14260-PA 17..162 25..170 525 63 Plus
Dsec\GM26891-PA 482 GM26891-PA 83..480 33..426 417 28.5 Plus
Dsec\GM14260-PA 262 GM14260-PA 165..262 330..427 334 58.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11968-PA 285 GD11968-PA 1..285 143..427 1458 95.4 Plus
Dsim\GD13517-PA 439 GD13517-PA 17..439 25..427 1127 50.6 Plus
Dsim\GD13518-PA 446 GD13518-PA 20..446 23..427 1109 49.9 Plus
Dsim\GD21932-PA 123 GD21932-PA 26..123 330..427 504 95.9 Plus
Dsim\GD20098-PA 482 GD20098-PA 83..480 33..426 412 28.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18041-PA 478 GJ18041-PA 77..478 25..427 1501 68.3 Plus
Dvir\GJ13240-PA 444 GJ13240-PA 19..444 23..427 1117 48.8 Plus
Dvir\GJ13239-PA 442 GJ13239-PA 5..442 10..427 1115 47.7 Plus
Dvir\GJ19859-PA 479 GJ19859-PA 86..477 39..426 444 30 Plus
Dvir\GJ22150-PA 481 GJ22150-PA 97..479 46..426 375 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24263-PA 426 GK24263-PA 21..426 25..427 1489 67.7 Plus
Dwil\GK16682-PA 442 GK16682-PA 12..442 21..427 1112 47.8 Plus
Dwil\GK16683-PA 445 GK16683-PA 2..445 12..427 1089 47.3 Plus
Dwil\GK24262-PA 428 GK24262-PA 6..420 16..426 912 44.2 Plus
Dwil\GK22811-PA 481 GK22811-PA 92..479 40..426 408 28.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19379-PA 427 GE19379-PA 1..427 1..427 2107 90.9 Plus
Dyak\GE21005-PA 439 GE21005-PA 2..439 12..427 1138 49.8 Plus
Dyak\GE21006-PA 446 GE21006-PA 20..446 23..427 1094 48.7 Plus
Dyak\GE19378-PA 425 GE19378-PA 3..419 16..426 888 42.1 Plus
Dyak\GE25110-PA 482 GE25110-PA 99..480 46..426 411 28.5 Plus

MIP05907.hyp Sequence

Translation from 91 to 1374

> MIP05907.hyp
MYLNENKNRIWACALCFFLSLICVQGRVGLGPGVQEWDYVEVRKGAHLFY
WLLYTTANVSHFIERPLVIWLQGGPGVASTGSGIFEQLGPIDIEGKTRES
SWLKHVNVLFVDSPVGTGFAYVEHHSLYARNNRQIALDLVQLMKQFLTKY
PDFRKVPLHIFSESYGGKMAPEFALELHLAKKVGELECDLKSVVVGNPWT
SPLDSILSYAPFLLQSGIVDDDGYRRISRLAGELAALVYGGKWLRALMKA
TEVQDEISASAGGVFIYNTQRRVHVDEVYRYGEDPQMSDFMRSNVTKALG
LGNMPVWMEQNSTVFERLSQDIFKPANQIVTKLLEETPIQVGIYSGILDL
LCATPGTVNWIRRLKWRRSLEYAKAPRTAIRIEGMLEGYEKHGGKLSMFW
VFRAGHLVQQENPAAMAYILRYFTSYG*

MIP05907.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31823-PA 427 CG31823-PA 1..427 1..427 2255 100 Plus
CG32483-PA 439 CG32483-PA 9..439 15..427 1122 49.9 Plus
CG3344-PA 446 CG3344-PA 11..446 14..427 1112 49.8 Plus
CG31821-PB 427 CG31821-PB 3..421 16..426 868 41.2 Plus
CG31821-PA 427 CG31821-PA 3..421 16..426 868 41.2 Plus