Clone Sequence Records
MIP05949.complete Sequence
774 bp assembled on 2011-03-10
GenBank Submission: BT126157.1
> MIP05949.complete
CACTTATTAATACGATATTATTACGATTACGATTATAAATTTCGAAAATT
TATATGTACAAGCTTACGTCGTTACGCCATGACAATCTACGAGCAGATCA
GTGATCAGTTTTGCCGCGTTGTGCACACCAACCTCAAGATACCACTATCC
TATTGCGAAACACGCTCACACTGGAAATTCTCGAAAAGTATCGATACAAT
GATATTTTTCTATACCCTTAGCTTTGGTATCCTTCGAGTGATACTACATT
TTATAGATTTGGTGAACATTTACTTCAGAGGGATGCGCTTGAGGCGGCCA
AGCAATCTCTTGATCTTGAGGGGCGAGAATTCGCGGGGCTTTCGAGTTCT
CAAGCACCTTTTAATGCTGAAAGCATGGATATTAGTCATATACGGCATGG
TATTCATCAAGCCGCATTACATCAATCCTTTCGTTGTGCTTTCTATCATC
ATTTTGACCATCGATGTGTTTGTATTGGTGTTGGATATCCTGCGAAAGGC
CAGGATACCTCTTGACCGCAGGGTGACCCTTTGGGAAATGATGCTCAACT
TGTGCTGTGTTTTTTACGTACAGTGGATTCTCAAGCAACAGATCCAGTAT
TAGCGTACGAATTTTTTTTGTTTGGATAAAATTATGGGCGCAATGCCGAT
ATGTGTTTATAATCATCAAAATTCTCCGTGACATGTAGCACTTCCTGAAA
TAAAATAAAGAGTCACTCGGATGTCTGTGGACTTCTTGGGACGACTGTAT
ACTTTCGAAAAAAAAAAAAAAAAA
MIP05949.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15110396..15110747 | 757..406 | 1700 | 98.9 | Minus |
chrX | 22417052 | chrX | 15111062..15111301 | 240..1 | 1200 | 100 | Minus |
chrX | 22417052 | chrX | 15110818..15110983 | 405..240 | 830 | 100 | Minus |
chrX | 22417052 | chrX | 16786320..16786476 | 404..248 | 500 | 87.9 | Minus |
chrX | 22417052 | chrX | 16786565..16786771 | 238..33 | 490 | 83.6 | Minus |
chrX | 22417052 | chrX | 16786032..16786243 | 617..406 | 460 | 81.1 | Minus |
chrX | 22417052 | chrX | 15096505..15096664 | 237..78 | 425 | 84.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15220270..15220622 | 758..406 | 1765 | 100 | Minus |
X | 23542271 | X | 15220937..15221176 | 240..1 | 1200 | 100 | Minus |
X | 23542271 | X | 15220693..15220858 | 405..240 | 830 | 100 | Minus |
X | 23542271 | X | 16896935..16897141 | 238..33 | 505 | 84.1 | Minus |
X | 23542271 | X | 16896690..16896846 | 404..248 | 500 | 87.9 | Minus |
X | 23542271 | X | 16896402..16896613 | 617..406 | 475 | 81.6 | Minus |
X | 23542271 | X | 15206397..15206556 | 237..78 | 425 | 84.4 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15228368..15228720 | 758..406 | 1765 | 100 | Minus |
X | 23527363 | X | 15229035..15229274 | 240..1 | 1200 | 100 | Minus |
X | 23527363 | X | 15228791..15228956 | 405..240 | 830 | 100 | Minus |
X | 23527363 | X | 16904788..16904944 | 404..248 | 500 | 87.8 | Minus |
X | 23527363 | X | 16904500..16904711 | 617..406 | 475 | 81.6 | Minus |
X | 23527363 | X | 15214495..15214654 | 237..78 | 425 | 84.3 | Minus |
X | 23527363 | X | 16905107..16905239 | 164..33 | 370 | 86.4 | Minus |
X | 23527363 | X | 16905033..16905100 | 238..171 | 205 | 86.7 | Minus |
X | 23527363 | X | 15214298..15214376 | 374..296 | 140 | 78.4 | Minus |
Blast to na_te.dros performed 2019-03-16 22:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
blood | 7410 | blood BLOOD 7410bp | 4576..4639 | 261..199 | 110 | 65.6 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 2429..2499 | 416..485 | 109 | 63.4 | Plus |
MIP05949.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:21:26 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15110818..15110982 | 241..405 | 100 | <- | Minus |
chrX | 15111062..15111301 | 1..240 | 100 | | Minus |
chrX | 15110396..15110747 | 406..757 | 98 | <- | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-10 18:01:08 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..525 | 79..603 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:55:07 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..525 | 79..603 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:27:25 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..525 | 79..603 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-10 18:01:07 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..525 | 79..603 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:55:07 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..757 | 1..757 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:25 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43075-RA | 1..757 | 1..757 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:26 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15220271..15220622 | 406..757 | 100 | <- | Minus |
X | 15220693..15220857 | 241..405 | 100 | <- | Minus |
X | 15220937..15221176 | 1..240 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:26 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15220271..15220622 | 406..757 | 100 | <- | Minus |
X | 15220693..15220857 | 241..405 | 100 | <- | Minus |
X | 15220937..15221176 | 1..240 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:26 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15220271..15220622 | 406..757 | 100 | <- | Minus |
X | 15220693..15220857 | 241..405 | 100 | <- | Minus |
X | 15220937..15221176 | 1..240 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:55:07 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15114304..15114655 | 406..757 | 100 | <- | Minus |
arm_X | 15114726..15114890 | 241..405 | 100 | <- | Minus |
arm_X | 15114970..15115209 | 1..240 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:01:08 Download gff for
MIP05949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15228369..15228720 | 406..757 | 100 | <- | Minus |
X | 15228791..15228955 | 241..405 | 100 | <- | Minus |
X | 15229035..15229274 | 1..240 | 100 | | Minus |
MIP05949.hyp Sequence
Translation from 0 to 602
> MIP05949.hyp
HLLIRYYYDYDYKFRKFICTSLRRYAMTIYEQISDQFCRVVHTNLKIPLS
YCETRSHWKFSKSIDTMIFFYTLSFGILRVILHFIDLVNIYFRGMRLRRP
SNLLILRGENSRGFRVLKHLLMLKAWILVIYGMVFIKPHYINPFVVLSII
ILTIDVFVLVLDILRKARIPLDRRVTLWEMMLNLCCVFYVQWILKQQIQY
*
MIP05949.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43075-PA | 174 | CG43075-PA | 1..174 | 27..200 | 907 | 100 | Plus |
CG33252-PA | 174 | CG33252-PA | 1..172 | 27..198 | 633 | 71.5 | Plus |
CG32588-PA | 170 | CG32588-PA | 1..168 | 27..198 | 496 | 56.1 | Plus |
CG9030-PB | 210 | CG9030-PB | 7..194 | 33..200 | 221 | 27.7 | Plus |
CG43076-PA | 160 | CG43076-PA | 1..157 | 27..200 | 153 | 26.7 | Plus |
MIP05949.pep Sequence
Translation from 0 to 602
> MIP05949.pep
HLLIRYYYDYDYKFRKFICTSLRRYAMTIYEQISDQFCRVVHTNLKIPLS
YCETRSHWKFSKSIDTMIFFYTLSFGILRVILHFIDLVNIYFRGMRLRRP
SNLLILRGENSRGFRVLKHLLMLKAWILVIYGMVFIKPHYINPFVVLSII
ILTIDVFVLVLDILRKARIPLDRRVTLWEMMLNLCCVFYVQWILKQQIQY
*
MIP05949.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:28:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19426-PA | 206 | GG19426-PA | 6..195 | 32..199 | 242 | 35.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43075-PA | 174 | CG43075-PA | 1..174 | 27..200 | 907 | 100 | Plus |
CG33252-PA | 174 | CG33252-PA | 1..172 | 27..198 | 633 | 71.5 | Plus |
CG32588-PA | 170 | CG32588-PA | 1..168 | 27..198 | 496 | 56.1 | Plus |
CG9030-PB | 210 | CG9030-PB | 7..194 | 33..200 | 221 | 27.7 | Plus |
CG43076-PA | 160 | CG43076-PA | 1..157 | 27..200 | 153 | 26.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11999-PA | 174 | GM11999-PA | 1..173 | 27..199 | 653 | 71.7 | Plus |
Dsec\GM11997-PA | 174 | GM11997-PA | 1..173 | 27..199 | 645 | 71.1 | Plus |
Dsec\GM13355-PA | 162 | GM13355-PA | 1..159 | 27..197 | 498 | 61.4 | Plus |
Dsec\GM13356-PA | 162 | GM13356-PA | 1..159 | 27..197 | 498 | 61.4 | Plus |
Dsec\GM13354-PA | 162 | GM13354-PA | 1..159 | 27..197 | 498 | 61.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24501-PA | 174 | GD24501-PA | 1..173 | 27..199 | 654 | 72.8 | Plus |
Dsim\GD15816-PA | 172 | GD15816-PA | 1..171 | 27..197 | 621 | 69.6 | Plus |
Dsim\GD24640-PA | 161 | GD24640-PA | 1..159 | 27..197 | 466 | 57.3 | Plus |
Dsim\GD15713-PA | 162 | GD15713-PA | 1..159 | 27..197 | 459 | 55.6 | Plus |
Dsim\GD15714-PA | 155 | GD15714-PA | 1..130 | 27..168 | 364 | 54.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:28:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16063-PA | 180 | GE16063-PA | 1..178 | 27..199 | 357 | 39.3 | Plus |
Dyak\GE16065-PA | 180 | GE16065-PA | 1..178 | 27..199 | 355 | 39.9 | Plus |
Dyak\GE16078-PA | 205 | GE16078-PA | 6..195 | 32..200 | 190 | 30.8 | Plus |