MIP05953.complete Sequence
419 bp assembled on 2010-04-12
GenBank Submission: BT124740.1
> MIP05953.complete
CCAGCCTCAAGTGGTTAGCTATTCTACAACTCTTAATTATTTTCGGTGCT
CTTGGGCACGCCGAAGTTGATGAAATTACCGATGTCGTAAAGGAGAAGCT
TTATGAGGCTATCTCCAAAACTGGATCTACGATCAAATCCGGATCGGCAA
GCTTACAGAGTCTTGATGATGCCGTGCGTAACGTTATAAAAATGAAAAAG
GGCGCGGCTAAGTCGCTCTTGGATCTAGTAAGCAATCGTATCTTAAAACC
TGAAAAGGACGCACCCGCTTCCCTCTCATCATGTGGTGAAGGGGAATTAG
TTTGTGAAATCAAAGGGGTACTGGCCGCAGAATCCACACAGCAACCAAAC
ACCATAACTTAATGTAGTGTGTATTGCAAGGAAATAAAGAGGAAAGCATC
TAAAAAAAAAAAAAAAAAA
MIP05953.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:28:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-RA | 601 | Sfp26Ad-RA | 54..456 | 1..403 | 2015 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:44:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 5941831..5942184 | 401..48 | 1770 | 100 | Minus |
chr2L | 23010047 | chr2L | 5942254..5942301 | 48..1 | 240 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:05:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:43:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5942778..5943133 | 403..48 | 1780 | 100 | Minus |
2L | 23513712 | 2L | 5943203..5943250 | 48..1 | 240 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:23:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5942778..5943133 | 403..48 | 1780 | 100 | Minus |
2L | 23513712 | 2L | 5943203..5943250 | 48..1 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 11:43:58 has no hits.
MIP05953.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:44:48 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 5941831..5942183 | 49..401 | 100 | <- | Minus |
chr2L | 5942254..5942301 | 1..48 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:55:00 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 5..366 | 1..362 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:23:18 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 5..366 | 1..362 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:38 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 5..366 | 1..362 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:55:00 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 14..413 | 1..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:23:18 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 14..414 | 1..401 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:38 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 35..435 | 1..401 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:44:48 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5942780..5943132 | 49..401 | 100 | <- | Minus |
2L | 5943203..5943250 | 1..48 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:44:48 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5942780..5943132 | 49..401 | 100 | <- | Minus |
2L | 5943203..5943250 | 1..48 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:44:48 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5942780..5943132 | 49..401 | 100 | <- | Minus |
2L | 5943203..5943250 | 1..48 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:23:18 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5942780..5943132 | 49..401 | 100 | <- | Minus |
arm_2L | 5943203..5943250 | 1..48 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:46:36 Download gff for
MIP05953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5942780..5943132 | 49..401 | 100 | <- | Minus |
2L | 5943203..5943250 | 1..48 | 100 | | Minus |
MIP05953.pep Sequence
Translation from 2 to 361
> MIP05953.pep
SLKWLAILQLLIIFGALGHAEVDEITDVVKEKLYEAISKTGSTIKSGSAS
LQSLDDAVRNVIKMKKGAAKSLLDLVSNRILKPEKDAPASLSSCGEGELV
CEIKGVLAAESTQQPNTIT*
MIP05953.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-PB | 121 | CG42603-PB | 3..121 | 1..119 | 579 | 100 | Plus |
Sfp26Ad-PA | 121 | CG42603-PA | 3..121 | 1..119 | 579 | 100 | Plus |
MIP05953.hyp Sequence
Translation from 2 to 361
> MIP05953.hyp
SLKWLAILQLLIIFGALGHAEVDEITDVVKEKLYEAISKTGSTIKSGSAS
LQSLDDAVRNVIKMKKGAAKSLLDLVSNRILKPEKDAPASLSSCGEGELV
CEIKGVLAAESTQQPNTIT*
MIP05953.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:50:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-PB | 121 | CG42603-PB | 3..121 | 1..119 | 579 | 100 | Plus |
Sfp26Ad-PA | 121 | CG42603-PA | 3..121 | 1..119 | 579 | 100 | Plus |