Clone Sequence Records
MIP05961.complete Sequence
497 bp assembled on 2011-08-24
GenBank Submission: BT128858.1
> MIP05961.complete
ATTGCTATTGGAGATGTCAAGATGGGGCGGTTGCTGTTTGTTCTTCTGAT
TTGTTCCCCAATACTGTCAATTAAATTCCAAGCAAATGCAGAGGATAACT
CAACAAAGAATGGCTTAGATCGAAACAGAGAAGGAGGTAAATCTTATGGA
GGTCATAAGGCGAATGTACCAGATGTTTCAAGGTTTCAAAGATCATGTTC
AACTCAAGAATGTAAGGAAAAGGAATTCAATGATATCCTCGACTCCATTC
TGAGCTCGGAAACAACTACGGAGCCTGAACGGGAAGAGGCTCCACCGAGG
AATGTTCCACAGAGACCAAATCGACCCTACATGGTTCGACCCAGCAGTAA
CGGGCACTTTCTTCATGACATTGTAACTTGGGTTGAAAGAACAAAGAGGG
CAATATTTGGATTTGGATAACATTTTTTTGCATAGTTACTTTCAAGTGAA
ATAAAAAGTATTCACCAACAAAGAAAAAAAAAAAAAAAAAAAAAAAA
MIP05961.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 3565045..3565306 | 468..207 | 1310 | 100 | Minus |
chr3R | 27901430 | chr3R | 3565472..3565620 | 149..1 | 745 | 100 | Minus |
chr3R | 27901430 | chr3R | 3565356..3565416 | 208..148 | 305 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7738985..7739246 | 468..207 | 1310 | 100 | Minus |
3R | 32079331 | 3R | 7739412..7739560 | 149..1 | 745 | 100 | Minus |
3R | 32079331 | 3R | 7739296..7739356 | 208..148 | 305 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 7479816..7480077 | 468..207 | 1310 | 100 | Minus |
3R | 31820162 | 3R | 7480243..7480391 | 149..1 | 745 | 100 | Minus |
3R | 31820162 | 3R | 7480127..7480187 | 208..148 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 10:58:00 has no hits.
MIP05961.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:58:59 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 3565040..3565304 | 209..473 | 98 | <- | Minus |
chr3R | 3565356..3565415 | 149..208 | 100 | <- | Minus |
chr3R | 3565473..3565620 | 1..148 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:31:00 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RB | 1..399 | 22..420 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:17:24 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RB | 1..399 | 22..420 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:31:00 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RB | 4..473 | 1..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:24 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RB | 4..473 | 1..473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:59 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738980..7739244 | 209..473 | 98 | <- | Minus |
3R | 7739296..7739355 | 149..208 | 100 | <- | Minus |
3R | 7739413..7739560 | 1..148 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:59 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738980..7739244 | 209..473 | 98 | <- | Minus |
3R | 7739296..7739355 | 149..208 | 100 | <- | Minus |
3R | 7739413..7739560 | 1..148 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:59 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738980..7739244 | 209..473 | 98 | <- | Minus |
3R | 7739296..7739355 | 149..208 | 100 | <- | Minus |
3R | 7739413..7739560 | 1..148 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:31:00 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3564702..3564966 | 209..473 | 98 | <- | Minus |
arm_3R | 3565018..3565077 | 149..208 | 100 | <- | Minus |
arm_3R | 3565135..3565282 | 1..148 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:28 Download gff for
MIP05961.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7479811..7480075 | 209..473 | 98 | <- | Minus |
3R | 7480127..7480186 | 149..208 | 100 | <- | Minus |
3R | 7480244..7480391 | 1..148 | 100 | | Minus |
MIP05961.hyp Sequence
Translation from 0 to 419
> MIP05961.hyp
IAIGDVKMGRLLFVLLICSPILSIKFQANAEDNSTKNGLDRNREGGKSYG
GHKANVPDVSRFQRSCSTQECKEKEFNDILDSILSSETTTEPEREEAPPR
NVPQRPNRPYMVRPSSNGHFLHDIVTWVERTKRAIFGFG*
MIP05961.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:56:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43254-PB | 132 | CG43254-PB | 1..132 | 8..139 | 700 | 100 | Plus |
CG43254-PA | 128 | CG43254-PA | 1..128 | 8..139 | 663 | 97 | Plus |
MIP05961.pep Sequence
Translation from 0 to 419
> MIP05961.pep
IAIGDVKMGRLLFVLLICSPILSIKFQANAEDNSTKNGLDRNREGGKSYG
GHKANVPDVSRFQRSCSTQECKEKEFNDILDSILSSETTTEPEREEAPPR
NVPQRPNRPYMVRPSSNGHFLHDIVTWVERTKRAIFGFG*
MIP05961.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43254-PB | 132 | CG43254-PB | 1..132 | 8..139 | 700 | 100 | Plus |
CG43254-PA | 128 | CG43254-PA | 1..128 | 8..139 | 663 | 97 | Plus |