MIP06061.complete Sequence
508 bp assembled on 2009-02-24
GenBank Submission: BT072947.1
> MIP06061.complete
GCTATTGCTATTGGAGATGTCAAGATGGGGCGGTTGCTGTTTGTTCTTCT
GATTTGTTCCCCAATACTGTCAATTAAATTCCAAGCAAATGCAGAGGATA
ACTCAACAAAGAATGGCTTAGATCGAAACAGAGAAGGAGGAGGTCATAAG
GCGAATGTACCAGATGTTTCAAGGTTTCAAAGATCATGTTCAACTCAAGA
ATGTAAGGAAAAGGAATTCAATGATATCCTCGACTCCATTCTGAGCTCGG
AAACAACTACGGAGCCTGAACGGGAAGAGGCTCCACCGAGGAATGTTCCA
CAGAGACCAAATCGACCCTACATGGTTCGACCCAGCAGTAACGGGCACTT
TCTTCATGACATTGTAACTTGGGTTGAAAGAACAAAGAGGGCAATATTTG
GATTTGGATAACATTTTTTTGCATAGTTACTTTCAAGTGAAATAAAAAGT
ATTCACCAATATTTAAAATAGGCTCAGCGATAAAAAAAAAAAAAAAAAAA
AAAAAAAA
MIP06061.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:25:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nc_15185.a | 480 | nc_15185.a | 1..480 | 1..480 | 2400 | 100 | Plus |
MB8.chr3R.pasa.66.a | 480 | MB8.chr3R.pasa.66.a | 1..480 | 1..480 | 2400 | 100 | Plus |
MB8.chr3R.pasa.72.a | 565 | MB8.chr3R.pasa.72.a | 224..565 | 139..480 | 1710 | 100 | Plus |
MB8.chr3R.pasa.72.a | 565 | MB8.chr3R.pasa.72.a | 74..213 | 1..140 | 700 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:12:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 3565024..3565306 | 480..198 | 1415 | 100 | Minus |
chr3R | 27901430 | chr3R | 3565484..3565623 | 140..1 | 700 | 100 | Minus |
chr3R | 27901430 | chr3R | 3565356..3565417 | 199..138 | 310 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:12:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7738964..7739246 | 480..198 | 1415 | 100 | Minus |
3R | 32079331 | 3R | 7739424..7739563 | 140..1 | 700 | 100 | Minus |
3R | 32079331 | 3R | 7739296..7739357 | 199..138 | 310 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 7479795..7480077 | 480..198 | 1415 | 100 | Minus |
3R | 31820162 | 3R | 7480255..7480394 | 140..1 | 700 | 100 | Minus |
3R | 31820162 | 3R | 7480127..7480188 | 199..138 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-17 00:12:36 has no hits.
MIP06061.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:13:23 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 3565023..3565304 | 200..481 | 99 | <- | Minus |
chr3R | 3565356..3565415 | 140..199 | 100 | <- | Minus |
chr3R | 3565485..3565623 | 1..139 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:31:36 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RA | 1..387 | 25..411 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:14:07 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RA | 1..387 | 25..411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:36 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RA | 1..479 | 1..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:07 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43254-RA | 1..479 | 1..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:23 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738963..7739244 | 200..481 | 99 | <- | Minus |
3R | 7739296..7739355 | 140..199 | 100 | <- | Minus |
3R | 7739425..7739563 | 1..139 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:23 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738963..7739244 | 200..481 | 99 | <- | Minus |
3R | 7739296..7739355 | 140..199 | 100 | <- | Minus |
3R | 7739425..7739563 | 1..139 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:23 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7738963..7739244 | 200..481 | 99 | <- | Minus |
3R | 7739296..7739355 | 140..199 | 100 | <- | Minus |
3R | 7739425..7739563 | 1..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:36 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3564685..3564966 | 200..481 | 99 | <- | Minus |
arm_3R | 3565018..3565077 | 140..199 | 100 | <- | Minus |
arm_3R | 3565147..3565285 | 1..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:11:29 Download gff for
MIP06061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7479794..7480075 | 200..481 | 99 | <- | Minus |
3R | 7480127..7480186 | 140..199 | 100 | <- | Minus |
3R | 7480256..7480394 | 1..139 | 100 | | Minus |
MIP06061.pep Sequence
Translation from 0 to 410
> MIP06061.pep
AIAIGDVKMGRLLFVLLICSPILSIKFQANAEDNSTKNGLDRNREGGGHK
ANVPDVSRFQRSCSTQECKEKEFNDILDSILSSETTTEPEREEAPPRNVP
QRPNRPYMVRPSSNGHFLHDIVTWVERTKRAIFGFG*
MIP06061.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43254-PA | 128 | CG43254-PA | 1..128 | 9..136 | 678 | 100 | Plus |
CG43254-PB | 132 | CG43254-PB | 1..132 | 9..136 | 663 | 97 | Plus |
MIP06061.hyp Sequence
Translation from 0 to 410
> MIP06061.hyp
AIAIGDVKMGRLLFVLLICSPILSIKFQANAEDNSTKNGLDRNREGGGHK
ANVPDVSRFQRSCSTQECKEKEFNDILDSILSSETTTEPEREEAPPRNVP
QRPNRPYMVRPSSNGHFLHDIVTWVERTKRAIFGFG*
MIP06061.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43254-PA | 128 | CG43254-PA | 1..128 | 9..136 | 678 | 100 | Plus |
CG43254-PB | 132 | CG43254-PB | 1..132 | 9..136 | 663 | 97 | Plus |