Clone MIP06082 Report

Search the DGRC for MIP06082

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:60
Well:82
Vector:pOT2|pOTB7_DraIII
Protein status:MIP06082.pep: Imported from assembly
Sequenced Size:543

Clone Sequence Records

MIP06082.complete Sequence

543 bp assembled on 2009-02-20

GenBank Submission: BT064651.1

> MIP06082.complete
AAAGTATTTAGTTCTTATCTTAGTCCTGGGTTTCCTTCATCTCACCTGGA
GTTCATCGGGGTCGTGCAAGGATGGTTTGGTTTTTAACCCCAAAAAGCGG
GTATGTGAACCGAAGCCAACGACAGAACCTCCAGATACTTGCCGACCCGG
AACGTACTGGATTCTAGAGAAGAAATCGTGTATCAAGTTGCGGCAAGTAA
TGTCTGGATATTTTCCTGCAAAACCTGAAAAGCCCATCCAAGACCTGAAG
TGCCCCAAAGGATTAATTTCTTTGGGAAATTTGTGTGTAAGGGAGTTAAA
AATTAAAAAAAAATCTCAAGGGAGCGGTAAAAACGGAATAGAGGTGGATA
TGGACGATAAATATAAAATTGTCATAAAAGAAAAACAGACTGACCCTCCT
CTTGATGCATAAATTTCATCATTTACCAGATTTATGATATAAATATTAAT
CGATTATTGGTCAAAGGAAGTCTTCAAGTGTCCTTTAGTTAATTTATGAT
TAATATAATAAAACTATAAAGTTAAAAAAAAAAAAAAAAAAAA

MIP06082.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:24:36
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-RA 540 Sfp51E-RA 20..540 1..521 2605 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11079825..11080201 523..147 1825 98.9 Minus
chr2R 21145070 chr2R 11080265..11080410 146..1 730 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15192625..15193004 526..147 1900 100 Minus
2R 25286936 2R 15193068..15193213 146..1 730 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15193824..15194203 526..147 1900 100 Minus
2R 25260384 2R 15194267..15194412 146..1 730 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:51:28 has no hits.

MIP06082.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:52:22 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11079825..11080201 147..523 98 <- Minus
chr2R 11080265..11080410 1..146 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:06 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 9..420 1..412 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:59 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 9..420 1..412 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:46:32 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 9..420 1..412 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:12:25 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 9..420 1..412 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-20 22:04:01 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 16..536 1..521 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:59 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 16..538 1..523 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:46:32 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 16..538 1..523 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:12:25 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 16..538 1..523 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15192628..15193004 147..523 100 <- Minus
2R 15193068..15193213 1..146 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15192628..15193004 147..523 100 <- Minus
2R 15193068..15193213 1..146 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15192628..15193004 147..523 100 <- Minus
2R 15193068..15193213 1..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:46:32 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11080133..11080509 147..523 100 <- Minus
arm_2R 11080573..11080718 1..146 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:41 Download gff for MIP06082.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15193827..15194203 147..523 100 <- Minus
2R 15194267..15194412 1..146 100   Minus

MIP06082.hyp Sequence

Translation from 0 to 411

> MIP06082.hyp
KYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTCRPG
TYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVRELK
IKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDA*

MIP06082.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-PA 139 CG42476-PA 4..139 1..136 732 100 Plus

MIP06082.pep Sequence

Translation from 1 to 411

> MIP06082.pep
KYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTCRPG
TYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVRELK
IKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDA*

MIP06082.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-PA 139 CG42476-PA 4..139 1..136 732 100 Plus