MIP06082.complete Sequence
543 bp assembled on 2009-02-20
GenBank Submission: BT064651.1
> MIP06082.complete
AAAGTATTTAGTTCTTATCTTAGTCCTGGGTTTCCTTCATCTCACCTGGA
GTTCATCGGGGTCGTGCAAGGATGGTTTGGTTTTTAACCCCAAAAAGCGG
GTATGTGAACCGAAGCCAACGACAGAACCTCCAGATACTTGCCGACCCGG
AACGTACTGGATTCTAGAGAAGAAATCGTGTATCAAGTTGCGGCAAGTAA
TGTCTGGATATTTTCCTGCAAAACCTGAAAAGCCCATCCAAGACCTGAAG
TGCCCCAAAGGATTAATTTCTTTGGGAAATTTGTGTGTAAGGGAGTTAAA
AATTAAAAAAAAATCTCAAGGGAGCGGTAAAAACGGAATAGAGGTGGATA
TGGACGATAAATATAAAATTGTCATAAAAGAAAAACAGACTGACCCTCCT
CTTGATGCATAAATTTCATCATTTACCAGATTTATGATATAAATATTAAT
CGATTATTGGTCAAAGGAAGTCTTCAAGTGTCCTTTAGTTAATTTATGAT
TAATATAATAAAACTATAAAGTTAAAAAAAAAAAAAAAAAAAA
MIP06082.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp51E-RA | 540 | Sfp51E-RA | 20..540 | 1..521 | 2605 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 11079825..11080201 | 523..147 | 1825 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 11080265..11080410 | 146..1 | 730 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15192625..15193004 | 526..147 | 1900 | 100 | Minus |
2R | 25286936 | 2R | 15193068..15193213 | 146..1 | 730 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 15193824..15194203 | 526..147 | 1900 | 100 | Minus |
2R | 25260384 | 2R | 15194267..15194412 | 146..1 | 730 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 14:51:28 has no hits.
MIP06082.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:52:22 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 11079825..11080201 | 147..523 | 98 | <- | Minus |
chr2R | 11080265..11080410 | 1..146 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:06 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 9..420 | 1..412 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:59 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 9..420 | 1..412 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:46:32 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 9..420 | 1..412 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:12:25 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 9..420 | 1..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-20 22:04:01 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 16..536 | 1..521 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:59 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 16..538 | 1..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:46:32 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 16..538 | 1..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:12:25 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 16..538 | 1..523 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15192628..15193004 | 147..523 | 100 | <- | Minus |
2R | 15193068..15193213 | 1..146 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15192628..15193004 | 147..523 | 100 | <- | Minus |
2R | 15193068..15193213 | 1..146 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:22 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15192628..15193004 | 147..523 | 100 | <- | Minus |
2R | 15193068..15193213 | 1..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:46:32 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11080133..11080509 | 147..523 | 100 | <- | Minus |
arm_2R | 11080573..11080718 | 1..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:41 Download gff for
MIP06082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15193827..15194203 | 147..523 | 100 | <- | Minus |
2R | 15194267..15194412 | 1..146 | 100 | | Minus |
MIP06082.hyp Sequence
Translation from 0 to 411
> MIP06082.hyp
KYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTCRPG
TYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVRELK
IKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDA*
MIP06082.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:45:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp51E-PA | 139 | CG42476-PA | 4..139 | 1..136 | 732 | 100 | Plus |
MIP06082.pep Sequence
Translation from 1 to 411
> MIP06082.pep
KYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTCRPG
TYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVRELK
IKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDA*
MIP06082.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp51E-PA | 139 | CG42476-PA | 4..139 | 1..136 | 732 | 100 | Plus |