MIP06166.complete Sequence
963 bp assembled on 2009-02-20
GenBank Submission: BT064657.1
> MIP06166.complete
TTTCAAGTGAACATAATCCAGTTTTCAGATTGTTCTATATTTTCCATAGA
TTTTTTAAGTTTTATTTCTCAAGAAAAATGGTCTCCTTTGGCGGTGTGGC
AAAACTATTGAGCAGCTTCGAGTGCTGTGCCAGTTCGTGGGTCAAAGCCG
TAAATCCCGGATGGTACGAGGCTCGTGAGATTCCGAAGACCATCCTGATC
CAGAAAGTGCGACAGGTGCCCCAGAATACCAGGGTGATACGCCAGAGACC
CCAAACCGCGGAGCCGCCCAAAAAATCCTCCAGCCAAAAGCGCCAACTTT
ATCTCTAAGCTCCAAAAAGTTGGGGAAATAATGACTCATTGATTTAAGTG
TTTTAATCGAATGTACATTGTATTGAGTTGTCTCGCAGTCGTCATCGATT
TCGTCATTTTGTCTGCTTCGCTACACGGCCACACTGAGTCGGTGCCGAGT
TTTTGCTTCGCGAGCAGGTGGTGTTGTCCAATCAGAATCGCGTAGACGGC
ACGAATAACAGAAAAAAATTCCAATAGAACAGCCGAGGGCGATTATTTAT
GTGTGTTCATGTTAAATGTTAAATGCAAAATTACGCGTCGCACGCTGCGC
CCACGCGATTTCGAATCCGCATCCGATTGTTCAGTGCAAACACACACACA
CCAACCAAGTGAATATAATATGTAAGCGAAAGGCAAGAAGCCAGCAACAA
AGCGCCAGTGATAAGCGCAATAATATAAATGCAATATAGTATAAATTCAA
CGTGAAAAGAAATCTCGCCAGCGAAATACAAAAAAAAGCGGAGGAAGCGA
CAAATGGAAATCAAGTAAAATGAAGAAGAGCGGAGAGATAGAAATCGTAA
TGTGTAAGCGCGACCAGAGCGTATGAAAAAATCGAAAAAAAAAAACGGTG
GAGCGAAGATTAAATAAATTTACAAGTGTGTTTTGTATTTGACCAAAAAA
AAAAAAAAAAAAA
MIP06166.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15072.e | 3587 | CG15072.e | 1..531 | 416..945 | 2615 | 99.8 | Plus |
CG15072.b | 3058 | CG15072.b | 1..101 | 746..846 | 505 | 100 | Plus |
CG15072.d | 3026 | CG15072.d | 1..69 | 746..814 | 345 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:06:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 14575188..14575761 | 375..944 | 2675 | 99 | Plus |
chr2R | 21145070 | chr2R | 14574490..14574830 | 1..341 | 1675 | 99.4 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:06:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18688071..18688642 | 375..945 | 2810 | 99.8 | Plus |
2R | 25286936 | 2R | 18687372..18687712 | 1..341 | 1705 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 18689270..18689841 | 375..945 | 2820 | 99.8 | Plus |
2R | 25260384 | 2R | 18688571..18688911 | 1..341 | 1705 | 100 | Plus |
2R | 25260384 | 2R | 18689174..18689208 | 341..375 | 175 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 07:06:51 has no hits.
MIP06166.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:07:44 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 14574490..14574830 | 1..341 | 99 | -> | Plus |
chr2R | 14575093..14575126 | 342..375 | 100 | -> | Plus |
chr2R | 14575189..14575761 | 376..944 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:46 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..231 | 78..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:53:13 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..231 | 78..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:28:39 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..231 | 78..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-20 22:39:42 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15072-RB | 1..42 | 829..870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:46 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..945 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:13 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..945 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:28:39 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42855-RB | 1..945 | 1..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:07:44 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18687372..18687712 | 1..341 | 100 | -> | Plus |
2R | 18687976..18688009 | 342..375 | 100 | -> | Plus |
2R | 18688072..18688641 | 376..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:07:44 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18687372..18687712 | 1..341 | 100 | -> | Plus |
2R | 18687976..18688009 | 342..375 | 100 | -> | Plus |
2R | 18688072..18688641 | 376..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:07:44 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18687372..18687712 | 1..341 | 100 | -> | Plus |
2R | 18687976..18688009 | 342..375 | 100 | -> | Plus |
2R | 18688072..18688641 | 376..944 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:13 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14574877..14575217 | 1..341 | 100 | -> | Plus |
arm_2R | 14575481..14575514 | 342..375 | 100 | -> | Plus |
arm_2R | 14575577..14576146 | 376..944 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:25 Download gff for
MIP06166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18688571..18688911 | 1..341 | 100 | -> | Plus |
2R | 18689175..18689208 | 342..375 | 100 | -> | Plus |
2R | 18689271..18689840 | 376..944 | 99 | | Plus |
MIP06166.pep Sequence
Translation from 2 to 307
> MIP06166.pep
SSEHNPVFRLFYIFHRFFKFYFSRKMVSFGGVAKLLSSFECCASSWVKAV
NPGWYEAREIPKTILIQKVRQVPQNTRVIRQRPQTAEPPKKSSSQKRQLY
L*
MIP06166.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21915-PA | 62 | GG21915-PA | 1..52 | 26..77 | 268 | 96.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42855-PB | 76 | CG42855-PB | 1..76 | 26..101 | 394 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:05:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM21907-PA | 76 | GM21907-PA | 1..76 | 26..101 | 363 | 92.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:05:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD11402-PA | 76 | GD11402-PA | 1..76 | 26..101 | 357 | 90.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:05:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11991-PA | 76 | GE11991-PA | 1..76 | 26..101 | 360 | 89.5 | Plus |
MIP06166.hyp Sequence
Translation from 2 to 307
> MIP06166.hyp
SSEHNPVFRLFYIFHRFFKFYFSRKMVSFGGVAKLLSSFECCASSWVKAV
NPGWYEAREIPKTILIQKVRQVPQNTRVIRQRPQTAEPPKKSSSQKRQLY
L*
MIP06166.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:03:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42855-PB | 76 | CG42855-PB | 1..76 | 26..101 | 394 | 100 | Plus |