Clone Sequence Records
MIP06238.complete Sequence
594 bp assembled on 2011-03-08
GenBank Submission: BT126128.1
> MIP06238.complete
ATCTGATGATCCGTCATGAAGCTACTGCTGTTGGCGGTGATTGTTGCCCT
CGCTTGGCTTCTTATAGAGGCTGGCAAGACCAGGACTAAGAACAGCTCCT
GTCTGGTGAAAAACAAATATCCCCCCGAATCTTCTTGTAGATCATCGCAT
CGGGAATTCTTTGCCTTTCACCGAGTTCTATTCGACTGCATAAAGGTGAC
CACAAATTGCCGCAAGATCTACAGGAGGAATGAGTTCCATAGTTTGCAAT
CGTGCAGAGATGCATGTCACTACCACATGGCTGAACCAAGTCCGCCACCA
CCCCAAAATGGTACGACTTCTGCACCTGGAGGTGCCTCCGGAGCGCCAGG
AGACGCTCCAGCAGCTGAAACGCCAGCTGCAGCGTGATCTTCAGGATCGG
ACACAAAAAAGATCAATTTAATTAAATTCCCGCAGATATTTGAAATAACT
TATAGAGAGCATTGTGATAATTTCAATTCGGTATTTTCTGTATATTTAAT
CACTGTGTGTGCACCGCATTACCAATTTTTTTTTGCCCTCGTATTTACAA
CTACATGATTTGCAAGACTCATAATACAAAAAAAAAAAAAAAAA
MIP06238.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 8242295..8242679 | 577..193 | 1880 | 99.2 | Minus |
chr2L | 23010047 | chr2L | 8242729..8242838 | 197..88 | 520 | 98.2 | Minus |
chr2L | 23010047 | chr2L | 8242896..8242987 | 92..1 | 445 | 98.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8243320..8243707 | 580..193 | 1940 | 100 | Minus |
2L | 23513712 | 2L | 8243757..8243868 | 197..86 | 560 | 100 | Minus |
2L | 23513712 | 2L | 8243913..8244003 | 91..1 | 440 | 98.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8243320..8243707 | 580..193 | 1940 | 100 | Minus |
2L | 23513712 | 2L | 8243757..8243868 | 197..86 | 560 | 100 | Minus |
2L | 23513712 | 2L | 8243913..8244003 | 91..1 | 440 | 98.9 | Minus |
Blast to na_te.dros performed 2019-03-16 22:19:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 700..799 | 403..503 | 124 | 59.4 | Plus |
MIP06238.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:19:44 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 8242295..8242676 | 196..577 | 99 | <- | Minus |
chr2L | 8242731..8242840 | 86..195 | 97 | <- | Minus |
chr2L | 8242903..8242987 | 1..85 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-08 15:11:29 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 1..372 | 16..387 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:54:13 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 1..372 | 16..387 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:26:40 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 1..372 | 16..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-08 15:11:28 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 1..372 | 16..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:54:13 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RB | 1..577 | 1..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:40 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RB | 1..577 | 1..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:44 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8243323..8243704 | 196..577 | 100 | <- | Minus |
2L | 8243759..8243868 | 86..195 | 100 | <- | Minus |
2L | 8243919..8244003 | 1..85 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:44 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8243323..8243704 | 196..577 | 100 | <- | Minus |
2L | 8243759..8243868 | 86..195 | 100 | <- | Minus |
2L | 8243919..8244003 | 1..85 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:19:44 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8243323..8243704 | 196..577 | 100 | <- | Minus |
2L | 8243759..8243868 | 86..195 | 100 | <- | Minus |
2L | 8243919..8244003 | 1..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:54:13 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8243323..8243704 | 196..577 | 100 | <- | Minus |
arm_2L | 8243759..8243868 | 86..195 | 100 | <- | Minus |
arm_2L | 8243919..8244003 | 1..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:00:54 Download gff for
MIP06238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8243323..8243704 | 196..577 | 100 | <- | Minus |
2L | 8243759..8243868 | 86..195 | 100 | <- | Minus |
2L | 8243919..8244003 | 1..85 | 100 | | Minus |
MIP06238.hyp Sequence
Translation from 15 to 386
> MIP06238.hyp
MKLLLLAVIVALAWLLIEAGKTRTKNSSCLVKNKYPPESSCRSSHREFFA
FHRVLFDCIKVTTNCRKIYRRNEFHSLQSCRDACHYHMAEPSPPPPQNGT
TSAPGGASGAPGDAPAAETPAAA*
MIP06238.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:02:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43057-PB | 123 | CG43057-PB | 1..123 | 1..123 | 661 | 100 | Plus |
CG43057-PA | 123 | CG43057-PA | 1..123 | 1..123 | 661 | 100 | Plus |
MIP06238.pep Sequence
Translation from 15 to 386
> MIP06238.pep
MKLLLLAVIVALAWLLIEAGKTRTKNSSCLVKNKYPPESSCRSSHREFFA
FHRVLFDCIKVTTNCRKIYRRNEFHSLQSCRDACHYHMAEPSPPPPQNGT
TSAPGGASGAPGDAPAAETPAAA*
MIP06238.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:03:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23462-PA | 124 | GG23462-PA | 1..110 | 1..110 | 440 | 70.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43057-PB | 123 | CG43057-PB | 1..123 | 1..123 | 661 | 100 | Plus |
CG43057-PA | 123 | CG43057-PA | 1..123 | 1..123 | 661 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:03:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL19390-PA | 115 | GL19390-PA | 1..111 | 1..113 | 192 | 37.3 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:03:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA20813-PA | 1909 | GA20813-PA | 1447..1528 | 25..102 | 200 | 47.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:03:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13117-PA | 126 | GM13117-PA | 1..112 | 1..112 | 507 | 91.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:03:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ20592-PA | 1453 | GJ20592-PA | 1087..1149 | 26..88 | 185 | 46 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:03:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11088-PA | 95 | GE11088-PA | 1..93 | 1..120 | 333 | 60.2 | Plus |