MIP06305.complete Sequence
405 bp assembled on 2009-02-20
GenBank Submission: BT064659.1
> MIP06305.complete
AAGCAACACTTGAAATGAAATTACTCTCTGCGGTTCTTCTAATAGGTACC
TTAAGTGCCATTTGTCTTGGCCAAAAGGAACCCATATGCAGGTCTGATCC
GAGTGTTGTCGGAAATTGTGGGCATAAAATTAAAGGGTATACCTATGAAG
TTCGAAAAAATAATTGCAAGAAGTTCCGGGCGATGGCCTGTAAGGTAACT
GGAAACTTTTTCCGTAGCAGGGATGCGTGCAATGCGAAGTGCAAGGACAC
CAGGAAGCCAGCTCAAAGCGGAGTCATTGAATTCTTCAGTCGAACGGTGT
CGCAGTTTCTGCAGATGATCTTAAGCCTAATGAGTTGGGCCGGATTTTGA
ACCAATAAACTATATTGATAATAGTAAAAATCTTAAAAAAAAAAAAAAAA
AAAAA
MIP06305.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-RB | 469 | CG42463-RB | 43..427 | 1..385 | 1925 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:28:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 3668196..3668498 | 384..82 | 1485 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 3668559..3668639 | 81..1 | 405 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:28:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3668690..3668993 | 385..82 | 1520 | 100 | Minus |
2L | 23513712 | 2L | 3669054..3669134 | 81..1 | 405 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3668690..3668993 | 385..82 | 1520 | 100 | Minus |
2L | 23513712 | 2L | 3669054..3669134 | 81..1 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:28:21 has no hits.
MIP06305.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:29:04 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 3668196..3668498 | 82..384 | 99 | <- | Minus |
chr2L | 3668559..3668639 | 1..81 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:11 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RA | 1..342 | 15..350 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:41 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..336 | 15..350 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:01:49 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..336 | 15..350 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:34 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..336 | 15..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-20 22:04:10 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RA | 1..342 | 15..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:41 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..384 | 1..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:01:49 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..384 | 1..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:34 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 1..384 | 1..384 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:29:04 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668691..3668993 | 82..384 | 100 | <- | Minus |
2L | 3669054..3669134 | 1..81 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:29:04 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668691..3668993 | 82..384 | 100 | <- | Minus |
2L | 3669054..3669134 | 1..81 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:29:04 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668691..3668993 | 82..384 | 100 | <- | Minus |
2L | 3669054..3669134 | 1..81 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:01:49 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3668691..3668993 | 82..384 | 100 | <- | Minus |
arm_2L | 3669054..3669134 | 1..81 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:18 Download gff for
MIP06305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668691..3668993 | 82..384 | 100 | <- | Minus |
2L | 3669054..3669134 | 1..81 | 100 | | Minus |
MIP06305.pep Sequence
Translation from 2 to 349
> MIP06305.pep
ATLEMKLLSAVLLIGTLSAICLGQKEPICRSDPSVVGNCGHKIKGYTYEV
RKNNCKKFRAMACKVTGNFFRSRDACNAKCKDTRKPAQSGVIEFFSRTVS
QFLQMILSLMSWAGF*
MIP06305.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:06:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14658-PA | 110 | GF14658-PA | 1..104 | 5..108 | 213 | 40.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:42:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bd-PB | 111 | CG42463-PB | 1..111 | 5..115 | 585 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 5..78 | 11..82 | 180 | 43.2 | Plus |
Sfp24Ba-PA | 121 | CG42461-PA | 6..75 | 12..81 | 174 | 45.7 | Plus |
Sfp24Bb-PA | 110 | CG42462-PA | 7..97 | 17..101 | 148 | 35.2 | Plus |
IM33-PB | 82 | CG16712-PB | 1..82 | 5..82 | 133 | 35.4 | Plus |
IM33-PA | 82 | CG16712-PA | 1..82 | 5..82 | 133 | 35.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:06:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22739-PA | 111 | GD22739-PA | 7..111 | 17..115 | 451 | 82.9 | Plus |
MIP06305.hyp Sequence
Translation from 2 to 349
> MIP06305.hyp
ATLEMKLLSAVLLIGTLSAICLGQKEPICRSDPSVVGNCGHKIKGYTYEV
RKNNCKKFRAMACKVTGNFFRSRDACNAKCKDTRKPAQSGVIEFFSRTVS
QFLQMILSLMSWAGF*
MIP06305.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-PB | 111 | CG42463-PB | 1..111 | 5..115 | 585 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 5..78 | 11..82 | 180 | 43.2 | Plus |
Sfp24Ba-PA | 121 | CG42461-PA | 6..75 | 12..81 | 174 | 45.7 | Plus |
Sfp24Bb-PA | 110 | CG42462-PA | 7..97 | 17..101 | 148 | 35.2 | Plus |
CG16712-PB | 82 | CG16712-PB | 1..82 | 5..82 | 133 | 35.4 | Plus |