Clone Sequence Records
MIP06306.complete Sequence
1032 bp assembled on 2009-02-20
GenBank Submission: BT064660.1
> MIP06306.complete
TAAACGAAAGTCATACGAAAAAATCTCTAACAACATAATAATATTTTTGA
TTTTCGATTCTGAACAATGAATAAAATGGAAGAAAACTTCTACAATGGAT
GCACTTGTTGCCATTGCTCTTGCCGCCGCTCTTGCTCTTGCTCGTCTTTA
AAACGATGCAATTCCGCTGAATCGTGTCGCTTACTTATTCAGAAAAGTTC
GAAATATATATACGATGGCGTTAGATGCTCAGATCTCAGATGTCCATACT
GCAACGAAGCGCTTGGACAGAAAATCCTTTTATCGCACTCGGCGGAGTCC
ACTGCTCGAACGCCACAACAAACGCGGATTTCCGACATACAGTTTAGTCA
TTCGGATAAAGGACGAAAAAGTTACAGTAAAATGAAATCGATGTCCGGAT
TTGAAGAGCCTAAAGATCAAGTTCAATATAAGAAGAGAGAGTCTAGCATA
TCAACACCATTCAGTTGCTATAGGGAGGATTCGCCAAGGTCCTCGTCCAG
AGTTAAGTCTACCGGAAAGTACAGTTGCAACTGCTTCACAAAGGAACAGC
CAAGAAAGTATGTTTCAAAGACTGCCGAAGAAATCAGAAGGACGGTTCGA
GCGGAGATTGCAGAGATGGAGCAAAAGCAGGCAATGGCAGACAAAAATGG
ATGTGATTTTACTTTTTGCAAGCCACCGCAGAGTGGACGATTGTCATCTA
ATGAAGAAACCAAGAGTAAATCTAAAGATGAAGAGATTTTTACGGAGTCC
GAGAAATTGATACTTAGCAAAATTGATTGGCGTACTACTGCCACCAATGA
TTTGTCTAATTCCGAGGTAATTTATTCGACGATAAAGCGCTTGCTGCGCG
TATGTCTGAACAACAAGATAATCGAACTTGGGCTCCTGGATAGTCTGCAT
GATGCGATAGCACAATTCAAACGAGACAACTAATAGGATTCCTTTTTTAT
TTTTGTGTATATTTTTTATAATTAAATTTGGGGTAACAGGGGGGAAACAT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP06306.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nc_24320.a | 994 | nc_24320.a | 1..994 | 1..994 | 4970 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:13:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 16956812..16957484 | 1000..327 | 3290 | 99.6 | Minus |
chrX | 22417052 | chrX | 16957638..16957811 | 327..154 | 870 | 100 | Minus |
chrX | 22417052 | chrX | 16957878..16958030 | 153..1 | 765 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17067303..17067977 | 1001..327 | 3375 | 100 | Minus |
X | 23542271 | X | 17068131..17068304 | 327..154 | 870 | 100 | Minus |
X | 23542271 | X | 17068371..17068523 | 153..1 | 765 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 17075401..17076075 | 1001..327 | 3375 | 100 | Minus |
X | 23527363 | X | 17076229..17076402 | 327..154 | 870 | 100 | Minus |
X | 23527363 | X | 17076469..17076621 | 153..1 | 765 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 17:13:01 has no hits.
MIP06306.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:13:48 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 16956812..16957483 | 328..1000 | 94 | <- | Minus |
chrX | 16957638..16957811 | 154..327 | 100 | <- | Minus |
chrX | 16957878..16958030 | 1..153 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:49 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..867 | 67..933 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:17:03 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..867 | 67..933 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:28:52 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..867 | 67..933 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:48 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..1000 | 1..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:17:03 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..1000 | 1..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:28:52 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 1..1000 | 1..1000 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:48 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17068371..17068523 | 1..153 | 100 | | Minus |
X | 17067304..17067976 | 328..1000 | 100 | <- | Minus |
X | 17068131..17068304 | 154..327 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:48 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17068371..17068523 | 1..153 | 100 | | Minus |
X | 17067304..17067976 | 328..1000 | 100 | <- | Minus |
X | 17068131..17068304 | 154..327 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:48 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17068371..17068523 | 1..153 | 100 | | Minus |
X | 17067304..17067976 | 328..1000 | 100 | <- | Minus |
X | 17068131..17068304 | 154..327 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:17:03 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16961337..16962009 | 328..1000 | 100 | <- | Minus |
arm_X | 16962164..16962337 | 154..327 | 100 | <- | Minus |
arm_X | 16962404..16962556 | 1..153 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:28 Download gff for
MIP06306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17075402..17076074 | 328..1000 | 100 | <- | Minus |
X | 17076229..17076402 | 154..327 | 100 | <- | Minus |
X | 17076469..17076621 | 1..153 | 100 | | Minus |
MIP06306.pep Sequence
Translation from 66 to 932
> MIP06306.pep
MNKMEENFYNGCTCCHCSCRRSCSCSSLKRCNSAESCRLLIQKSSKYIYD
GVRCSDLRCPYCNEALGQKILLSHSAESTARTPQQTRISDIQFSHSDKGR
KSYSKMKSMSGFEEPKDQVQYKKRESSISTPFSCYREDSPRSSSRVKSTG
KYSCNCFTKEQPRKYVSKTAEEIRRTVRAEIAEMEQKQAMADKNGCDFTF
CKPPQSGRLSSNEETKSKSKDEEIFTESEKLILSKIDWRTTATNDLSNSE
VIYSTIKRLLRVCLNNKIIELGLLDSLHDAIAQFKRDN*
MIP06306.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18207-PA | 313 | GG18207-PA | 44..305 | 42..285 | 303 | 41.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43077-PA | 288 | CG43077-PA | 1..288 | 1..288 | 1516 | 100 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:06:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15625-PA | 240 | GE15625-PA | 122..240 | 162..288 | 173 | 39.4 | Plus |
MIP06306.hyp Sequence
Translation from 66 to 932
> MIP06306.hyp
MNKMEENFYNGCTCCHCSCRRSCSCSSLKRCNSAESCRLLIQKSSKYIYD
GVRCSDLRCPYCNEALGQKILLSHSAESTARTPQQTRISDIQFSHSDKGR
KSYSKMKSMSGFEEPKDQVQYKKRESSISTPFSCYREDSPRSSSRVKSTG
KYSCNCFTKEQPRKYVSKTAEEIRRTVRAEIAEMEQKQAMADKNGCDFTF
CKPPQSGRLSSNEETKSKSKDEEIFTESEKLILSKIDWRTTATNDLSNSE
VIYSTIKRLLRVCLNNKIIELGLLDSLHDAIAQFKRDN*
MIP06306.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:03:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43077-PA | 288 | CG43077-PA | 1..288 | 1..288 | 1516 | 100 | Plus |