Clone Sequence Records
MIP06329.complete Sequence
440 bp assembled on 2009-02-20
GenBank Submission: BT064661.1
> MIP06329.complete
CGAAATTCTTAAGCTGCTATGCAAGGAACGAGGGTTCAATCTATTATCGA
AAGCAACAAAATTTGCAATTTATTTCCCATAAGCTATGGCCGAGTTGGAT
GCTACAACCCTATCTGAATACGATATTGAATATATAGACTTTAACATGAC
AACTGTGGCGTACCGTACAACCACTGGACACCCGGATACTAACCTAGGTG
CTTGGGGACTTTTGTTCATATTCGTCGTAATTTTTCTTATCATTGCTGCC
TGCTGTGCTTGTATGGGTGTTCTCGTCCTTTTTGGTTGTATGAAGTCCTT
TCTCTGTTTTCGCTGTAGACGCCGAGGCGACGAGTTTATAGGAAGGGAAC
CCTGACTGTCGTTGAAATTCTGTCATTAAAACTGAAACTTGTGCTAATAA
AATTATATGTTTTGTATGAATCGAAAAAAAAAAAAAAAAA
MIP06329.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nc_8507.a | 423 | nc_8507.a | 1..423 | 1..423 | 2115 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2R | 21145070 | chr2R | 17839958..17840351 | 423..30 | 1955 | 99.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21953613..21954008 | 425..30 | 1980 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25260384 | 2R | 21954812..21955207 | 425..30 | 1980 | 100 | Minus |
| 2R | 25260384 | 2R | 21955265..21955294 | 30..1 | 150 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 20:49:33 has no hits.
MIP06329.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:50:37 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2R | 17839958..17840350 | 31..423 | 99 | <- | Minus |
| chr2R | 17840409..17840438 | 1..30 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:24:11 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43405-RA | 1..270 | 86..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:24:11 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43405-RA | 1..423 | 1..423 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:37 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21953615..21954007 | 31..423 | 100 | <- | Minus |
| 2R | 21954066..21954095 | 1..30 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:37 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21953615..21954007 | 31..423 | 100 | <- | Minus |
| 2R | 21954066..21954095 | 1..30 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:37 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21953615..21954007 | 31..423 | 100 | <- | Minus |
| 2R | 21954066..21954095 | 1..30 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:24:11 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17841120..17841512 | 31..423 | 100 | <- | Minus |
| arm_2R | 17841571..17841600 | 1..30 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:31 Download gff for
MIP06329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21954814..21955206 | 31..423 | 100 | <- | Minus |
| 2R | 21955265..21955294 | 1..30 | 100 | | Minus |
MIP06329.pep Sequence
Translation from 85 to 354
> MIP06329.pep
MAELDATTLSEYDIEYIDFNMTTVAYRTTTGHPDTNLGAWGLLFIFVVIF
LIIAACCACMGVLVLFGCMKSFLCFRCRRRGDEFIGREP*
Sequence MIP06329.pep has no blast hits.
MIP06329.hyp Sequence
Translation from 85 to 354
> MIP06329.hyp
MAELDATTLSEYDIEYIDFNMTTVAYRTTTGHPDTNLGAWGLLFIFVVIF
LIIAACCACMGVLVLFGCMKSFLCFRCRRRGDEFIGREP*
Sequence MIP06329.hyp has no blast hits.
