MIP06336.complete Sequence
479 bp assembled on 2009-02-20
GenBank Submission: BT064662.1
> MIP06336.complete
CCCAGTTATACTGTACACTTTCGTCATTTTCAACCATCGCAAGAAGATAG
TGTACAAATCGTGAAAATGAAATTCGTGATATTGCTATCCTTGATGTGCA
TCGGAATTGGTTATGCCCAACAACAGTCGGAAGTCAAATGCTTCATGGAC
GCCATTCCTGTGGGCGAATGTGGTAGTCGGATTATAGGGTATAGCTATTC
GAGTGTAAGAGCCCGTTGCGTAAACTATGAGACCATAGGTTGCGAGGTCA
TCGGAAATTTCTTCACCGACAGGAAAGTGTGTGAGGCCAAATGCAAACCG
CCGATCAGTTTTAGAAACAATCCATTCAGTTATTATTTCGAAAGAGCTTT
TAACCAGGCCCGCGATACTTTAAGAAGAATATTCAATCTACCTCAGTAAA
ATAATTATGTGGAAGAAATAAAGAATATCAATTTAATTGCACTGTTAATA
AGCCAGAAAAACAAAAAAAAAAAAAAAAA
MIP06336.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:24:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-RA | 574 | Sfp24Bb-RA | 52..511 | 1..460 | 2300 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:51:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 3668762..3669090 | 460..132 | 1600 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 3669148..3669280 | 133..1 | 650 | 99.2 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:06:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:51:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3669257..3669585 | 460..132 | 1645 | 100 | Minus |
2L | 23513712 | 2L | 3669643..3669775 | 133..1 | 665 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3669257..3669585 | 460..132 | 1645 | 100 | Minus |
2L | 23513712 | 2L | 3669643..3669775 | 133..1 | 665 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 14:51:26 has no hits.
MIP06336.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:52:20 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 3668759..3669088 | 134..462 | 98 | <- | Minus |
chr2L | 3669148..3669280 | 1..133 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:10 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..333 | 67..399 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:36:50 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..333 | 67..399 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:46:27 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..333 | 67..399 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:12:22 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..333 | 67..399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-20 22:04:08 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..395 | 59..453 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:36:50 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..456 | 1..456 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:46:27 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..456 | 1..456 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:12:22 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 1..456 | 1..456 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:20 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3669254..3669583 | 134..462 | 99 | <- | Minus |
2L | 3669643..3669775 | 1..133 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:20 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3669254..3669583 | 134..462 | 99 | <- | Minus |
2L | 3669643..3669775 | 1..133 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:20 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3669254..3669583 | 134..462 | 99 | <- | Minus |
2L | 3669643..3669775 | 1..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:46:27 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3669254..3669583 | 134..462 | 99 | <- | Minus |
arm_2L | 3669643..3669775 | 1..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:29 Download gff for
MIP06336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3669254..3669583 | 134..462 | 99 | <- | Minus |
2L | 3669643..3669775 | 1..133 | 100 | | Minus |
MIP06336.pep Sequence
Translation from 0 to 398
> MIP06336.pep
PSYTVHFRHFQPSQEDSVQIVKMKFVILLSLMCIGIGYAQQQSEVKCFMD
AIPVGECGSRIIGYSYSSVRARCVNYETIGCEVIGNFFTDRKVCEAKCKP
PISFRNNPFSYYFERAFNQARDTLRRIFNLPQ*
MIP06336.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:06:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14658-PA | 110 | GF14658-PA | 1..109 | 23..131 | 249 | 41.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-PA | 110 | CG42462-PA | 1..110 | 23..132 | 589 | 100 | Plus |
Sfp24Bd-PB | 111 | CG42463-PB | 13..97 | 29..119 | 148 | 35.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22739-PA | 111 | GD22739-PA | 1..97 | 23..119 | 226 | 49.5 | Plus |
MIP06336.hyp Sequence
Translation from 0 to 398
> MIP06336.hyp
PSYTVHFRHFQPSQEDSVQIVKMKFVILLSLMCIGIGYAQQQSEVKCFMD
AIPVGECGSRIIGYSYSSVRARCVNYETIGCEVIGNFFTDRKVCEAKCKP
PISFRNNPFSYYFERAFNQARDTLRRIFNLPQ*
MIP06336.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-PA | 110 | CG42462-PA | 1..110 | 23..132 | 589 | 100 | Plus |
CG42463-PB | 111 | CG42463-PB | 13..97 | 29..119 | 148 | 35.2 | Plus |