Clone Sequence Records
MIP06396.complete Sequence
365 bp assembled on 2009-02-24
GenBank Submission: BT070225.1
> MIP06396.complete
GAGAGAGCGGCTAAAAGTATCCGAAAAAGAACGTAACACAAACGATCTGA
TAAAATAAGAACGCACGATGATGACGCCCGATCCAGAACAACCGTTAAGT
GCTCCACCCCAAATGATGCTGCAACAGGGTGAGCGAAAGAGAGGGCGAGC
CCGATACCGAAAGAGACAGAGGCAGAGCCGAACAGAAACGACAGTGAAAG
TTCTACACTTTCGCTTTTTCACAGAACCCTGCTATCATACGAAAAGCAGC
AATCGTAGAGATAGAAACCTTTGGAAATACAATACATAGTACATCAGCAA
ATGTGCGGTTGAATAAAACACCATGAGGTCCATTGGAATACAAAAAAAAA
AAAAAAAAAAAAAAA
MIP06396.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MB8.chr3L.pasa.55.a | 376 | MB8.chr3L.pasa.55.a | 1..340 | 1..340 | 1685 | 99.7 | Plus |
| MB8.chr3L.pasa.63.a | 371 | MB8.chr3L.pasa.63.a | 1..335 | 1..340 | 1585 | 98.2 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:15:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 17022808..17023116 | 309..1 | 1500 | 99 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:07:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17033368..17033676 | 309..1 | 1530 | 99.7 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 17026468..17026776 | 309..1 | 1530 | 99.6 | Minus |
| 3L | 28103327 | 3L | 17026220..17026253 | 340..307 | 170 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 07:15:29 has no hits.
MIP06396.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:16:35 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 17022559..17022592 | 308..341 | 97 | <- | Minus |
| chr3L | 17022810..17023116 | 1..307 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:22:08 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43250-RA | 1..222 | 68..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:22:08 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43250-RA | 1..340 | 1..341 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:35 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17033370..17033676 | 1..307 | 99 | | Minus |
| 3L | 17033119..17033152 | 308..341 | 97 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:35 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17033370..17033676 | 1..307 | 99 | | Minus |
| 3L | 17033119..17033152 | 308..341 | 97 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:35 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17033370..17033676 | 1..307 | 99 | | Minus |
| 3L | 17033119..17033152 | 308..341 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:22:08 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17026470..17026776 | 1..307 | 99 | | Minus |
| arm_3L | 17026219..17026252 | 308..341 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:11:34 Download gff for
MIP06396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17026470..17026776 | 1..307 | 99 | | Minus |
| 3L | 17026219..17026252 | 308..341 | 97 | <- | Minus |
MIP06396.pep Sequence
Translation from 67 to 288
> MIP06396.pep
MMTPDPEQPLSAPPQMMLQQGERKRGRARYRKRQRQSRTETTVKVLHFRF
FTEPCYHTKSSNRRDRNLWKYNT*
Sequence MIP06396.pep has no blast hits.
MIP06396.hyp Sequence
Translation from 67 to 288
> MIP06396.hyp
MMTPDPEQPLSAPPQMMLQQGERKRGRARYRKRQRQSRTETTVKVLHFRF
FTEPCYHTKSSNRRDRNLWKYNT*
Sequence MIP06396.hyp has no blast hits.
