Clone MIP06482 Report

Search the DGRC for MIP06482

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:64
Well:82
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG18815-RD
Protein status:MIP06482.pep: gold
Sequenced Size:1395

Clone Sequence Records

MIP06482.complete Sequence

1395 bp assembled on 2009-02-21

GenBank Submission: BT066323.1

> MIP06482.complete
CCGACTATCACTCATCTCTGAACTTTTTGGAACGCAGCTGCATGAATTGT
CGTAGTTGAGCGAATTTAAACAAATTAACACAATACTTGTGGTATTACCT
GAAATCCGCTGACACCGAAAAAAGCGACGAAAGCAGCGCCAAGTCGCCGA
ATCGCAGAGTACCTGGAATAGGAATAGTGCGTCCCCAGTAGAGGCTAAAC
TGAACAGCAGACATGGCTGCGCCGGTCATTGTCGAGGCCACGGTCAAGCA
AACCGCCACGCTGATCTTCATGCACGGCCTGGGTGATACGGGTCATGGCT
GGAGCAGTGCCCTAGCCGCCATCCGCCCACCTTTCATGAAAGTCATCTGC
CCCACGGCGCCCACACAGCCCGTTTCGCTGAACGCCGGCTTCCGCATGCC
GTCGTGGTTTGACCTGAAGACGCTGGACATCGGTGGGCCCGAGGACGAGC
CGGGCATCCAGTCGGCGCGTGATAGTGTGCACGGTATGATCCAGAAGGAG
ATTAGCGCTGGGATTCCGGCCAATCGCATTGTCCTGGGCGGATTCTCGCA
GGGCGGAGCCTTGGCACTGTACTCGGCACTCACGTACGATCAGCCGCTGG
CCGGCGTGGTGGCCCTATCCTGTTGGCTGCCGCTGCACAAGCAGTTCCCA
GGCGCCAAGGTGAACAGCGATGATGTGCCGATTTTCCAGGCGCATGGCGA
CTACGATCCCGTGGTGCCGTACAAATTCGGCCAGCTGAGCGCCAGCCTGC
TCAAGTCGTTCATGAAGAATGTGACGTTCAAGACGTACAGTGGACTATCG
CACTCGTCGTCCGACGACGAAATGGATGACGTCAAGGACATCATCAGTAA
ATGGCAACAGGCAAACAATCATCTGTAGAGCCGCGGCCCCACTGGCTACC
AATTGAAATTCGCATTCTTCACTTGTTAAACCAATGGCAATATACGAACC
GGTTGTTCAGATTAAACGACTCCCTCGGGCCCTCAAATGCACACCCTCTC
AGATTCTTTATAAGCACACATATTCCACCTGCTAATCCAGTAGTCCTGCC
GCACCACTCACCATCTCTCATCTCGATCTATATATTTGCAGACACAGTGG
GATAGCCAGAACATGGCTAGAAAGGCGCAATGCTGCCAGTTATCGTAGTA
GCAACCAGTGCTAGTTGTAGTGAAGGTTCCTTCCTCAAATCAAGCAAATC
AAAGCTCCTCAGCCTAGTCAGGACGTCTCGGGCCGCACGAGAATTGTATT
TTAGTAATTATTTTGTACATACACACGATGAAGTTGGTTAAGAAGTTGAA
GTTGGTTCACCTGGTGAAGTGACAGGCAATCCATTTGCCGTAGCGAATGG
CCAATAAAGTTATTTGAAGCTCTCAAAAAAAAAAAAAAAAAAAAA

MIP06482.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG18815.a 1386 CG18815.a 13..1386 1..1374 6870 100 Plus
CG18815.c 1149 CG18815.c 13..866 1..854 4270 100 Plus
CG18815-RA 1437 CG18815-RA 34..887 1..854 4270 100 Plus
CG18815.c 1149 CG18815.c 866..1149 1091..1374 1420 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11619871..11620416 292..837 2685 99.5 Plus
chr3L 24539361 chr3L 11621145..11621665 854..1374 2575 99.6 Plus
chr3L 24539361 chr3L 11619249..11619412 101..264 805 99.4 Plus
chr3L 24539361 chr3L 11618943..11619043 1..101 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:07:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11628960..11629505 292..837 2730 100 Plus
3L 28110227 3L 11630229..11630751 854..1376 2615 100 Plus
3L 28110227 3L 11628342..11628505 101..264 805 99.4 Plus
3L 28110227 3L 11628036..11628136 1..101 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11622060..11622605 292..837 2730 100 Plus
3L 28103327 3L 11623329..11623851 854..1376 2615 100 Plus
3L 28103327 3L 11621442..11621605 101..264 805 99.3 Plus
3L 28103327 3L 11621136..11621236 1..101 505 100 Plus
3L 28103327 3L 11621662..11621694 260..292 165 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:51:31 has no hits.

MIP06482.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:52:23 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11618943..11619043 1..101 100 -> Plus
chr3L 11619250..11619408 102..260 100 -> Plus
chr3L 11619470..11619501 261..292 96 -> Plus
chr3L 11619872..11620415 293..836 99 -> Plus
chr3L 11620492..11620509 837..854 100 -> Plus
chr3L 11621146..11621665 855..1374 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:21 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RC 1..642 213..854 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:37:13 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RC 1..642 213..854 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:46:36 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RD 1..666 213..878 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:12:28 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RD 1..666 213..878 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-21 16:49:14 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RA 1..820 35..854 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:37:13 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RA 1..820 35..854 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:46:36 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RD 1..1373 2..1374 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:12:28 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
CG18815-RD 1..1373 2..1374 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:23 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11628036..11628136 1..101 100 -> Plus
3L 11628343..11628501 102..260 100 -> Plus
3L 11628563..11628594 261..292 100 -> Plus
3L 11628961..11629504 293..836 100 -> Plus
3L 11629581..11629598 837..854 100 -> Plus
3L 11630230..11630749 855..1374 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:23 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11628036..11628136 1..101 100 -> Plus
3L 11628343..11628501 102..260 100 -> Plus
3L 11628563..11628594 261..292 100 -> Plus
3L 11628961..11629504 293..836 100 -> Plus
3L 11629581..11629598 837..854 100 -> Plus
3L 11630230..11630749 855..1374 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:23 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11628036..11628136 1..101 100 -> Plus
3L 11628343..11628501 102..260 100 -> Plus
3L 11628563..11628594 261..292 100 -> Plus
3L 11628961..11629504 293..836 100 -> Plus
3L 11629581..11629598 837..854 100 -> Plus
3L 11630230..11630749 855..1374 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:46:36 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11621136..11621236 1..101 100 -> Plus
arm_3L 11621443..11621601 102..260 100 -> Plus
arm_3L 11621663..11621694 261..292 100 -> Plus
arm_3L 11622061..11622604 293..836 100 -> Plus
arm_3L 11622681..11622698 837..854 100 -> Plus
arm_3L 11623330..11623849 855..1374 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:10:56 Download gff for MIP06482.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11622061..11622604 293..836 100 -> Plus
3L 11622681..11622698 837..854 100 -> Plus
3L 11623330..11623849 855..1374 100   Plus
3L 11621136..11621236 1..101 100 -> Plus
3L 11621443..11621601 102..260 100 -> Plus
3L 11621663..11621694 261..292 100 -> Plus

MIP06482.pep Sequence

Translation from 212 to 877

> MIP06482.pep
MAAPVIVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAP
TQPVSLNAGFRMPSWFDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAG
IPANRIVLGGFSQGGALALYSALTYDQPLAGVVALSCWLPLHKQFPGAKV
NSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSHSSS
DDEMDDVKDIISKWQQANNHL*

MIP06482.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25278-PA 216 GF25278-PA 1..214 1..214 1118 98.1 Plus
Dana\GF17085-PA 235 GF17085-PA 8..221 7..216 280 34.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15517-PA 216 GG15517-PA 1..214 1..214 1122 98.6 Plus
Dere\GG17261-PA 235 GG17261-PA 4..220 3..211 268 33.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14861-PA 216 GH14861-PA 1..214 1..214 1073 93 Plus
Dgri\GH19562-PA 232 GH19562-PA 8..218 12..212 247 30.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG18815-PD 221 CG18815-PD 1..221 1..221 1162 100 Plus
CG18815-PE 232 CG18815-PE 1..216 1..216 1128 99.5 Plus
CG18815-PC 216 CG18815-PC 1..214 1..214 1124 100 Plus
CG18815-PB 216 CG18815-PB 1..214 1..214 1124 100 Plus
CG18815-PA 216 CG18815-PA 1..214 1..214 1124 100 Plus
CG6567-PB 235 CG6567-PB 8..220 7..211 267 34.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13712-PA 216 GI13712-PA 1..214 1..214 1089 94.4 Plus
Dmoj\GI15223-PA 216 GI15223-PA 3..211 9..211 269 32.1 Plus
Dmoj\GI23857-PA 232 GI23857-PA 8..219 12..213 256 32.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16272-PA 216 GL16272-PA 1..214 1..214 1104 96.3 Plus
Dper\GL21926-PA 214 GL21926-PA 4..199 3..190 273 34.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15093-PA 216 GA15093-PA 1..214 1..214 1104 96.3 Plus
Dpse\GA19689-PA 235 GA19689-PA 4..220 3..211 282 32.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25286-PA 216 GM25286-PA 1..214 1..214 1129 99.5 Plus
Dsec\GM26145-PA 235 GM26145-PA 4..222 3..213 263 32.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14317-PA 216 GD14317-PA 1..214 1..214 1129 99.5 Plus
Dsim\GD20698-PA 235 GD20698-PA 4..222 3..213 268 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14054-PA 216 GJ14054-PA 1..214 1..214 1081 93 Plus
Dvir\GJ10571-PA 232 GJ10571-PA 8..219 12..213 272 33 Plus
Dvir\GJ17261-PA 217 GJ17261-PA 7..214 12..213 253 32.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17177-PA 216 GK17177-PA 1..214 1..214 1110 96.3 Plus
Dwil\GK13386-PA 233 GK13386-PA 7..218 10..211 284 34 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21832-PA 216 GE21832-PA 1..214 1..214 1122 98.6 Plus
Dyak\GE24662-PA 235 GE24662-PA 4..220 3..211 265 33.2 Plus

MIP06482.hyp Sequence

Translation from 212 to 877

> MIP06482.hyp
MAAPVIVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAP
TQPVSLNAGFRMPSWFDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAG
IPANRIVLGGFSQGGALALYSALTYDQPLAGVVALSCWLPLHKQFPGAKV
NSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSHSSS
DDEMDDVKDIISKWQQANNHL*

MIP06482.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18815-PD 221 CG18815-PD 1..221 1..221 1162 100 Plus
CG18815-PE 232 CG18815-PE 1..216 1..216 1128 99.5 Plus
CG18815-PC 216 CG18815-PC 1..214 1..214 1124 100 Plus
CG18815-PB 216 CG18815-PB 1..214 1..214 1124 100 Plus
CG18815-PA 216 CG18815-PA 1..214 1..214 1124 100 Plus