MIP06488.complete Sequence
499 bp assembled on 2009-04-08
GenBank Submission: BT082014.1
> MIP06488.complete
AGAAAAACCTGCTGATAGCAATTATGTGTGTGCGTCTCGTTGGATCCGCT
CTCTGTTGCTGTTGCAAATTGGGCCTCAAGTGCCTGTGCATCTTCGCCTG
TTCCACGGTCGGTGTTCTCGCCATAGTTGCCTTGGTCGTTTACTTTTGTT
TCTTCCACAACAAATCGGAGGACTCGACCACAAAGTCTCTCTCTGATTCT
ACTATCGATAAGTCCTTGAAGGATAGCATAACTACTGCAACGGAAGCCCC
TTCACTCGTCAGAGGATATCTCCAACAAATGATAGAAAGAATCTAAAATG
TAATGTAATGTATAAATTACTATCGCATATCATATATCACATCTCCAGGA
GTGCACAATTTTTGAAATGGAAATGGAAACCCCCAAAAGTATCTTTCAGC
TAAATTGGAAGTTGGAGAAATTGATAGATTTGTGTTTTGTGAATTCCTAA
CATTTGAATATATAATTTTATTATTATTTTCCAAAAAAAAAAAAAAAAA
MIP06488.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:29:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nc_3992.a | 479 | nc_3992.a | 14..479 | 1..466 | 2330 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 20471235..20471659 | 482..58 | 2125 | 100 | Minus |
chr2L | 23010047 | chr2L | 20471711..20471768 | 58..1 | 290 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:07:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20472791..20473217 | 484..58 | 2135 | 100 | Minus |
2L | 23513712 | 2L | 20473269..20473326 | 58..1 | 290 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20472791..20473217 | 484..58 | 2135 | 100 | Minus |
2L | 23513712 | 2L | 20473269..20473326 | 58..1 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 18:22:57 has no hits.
MIP06488.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:24:14 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 20471235..20471658 | 59..482 | 100 | <- | Minus |
chr2L | 20471711..20471768 | 1..58 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:44 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 1..273 | 24..296 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:18 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 1..273 | 24..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:44 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 60..541 | 1..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:18 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 60..541 | 1..482 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:14 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20472793..20473216 | 59..482 | 100 | <- | Minus |
2L | 20473269..20473326 | 1..58 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:14 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20472793..20473216 | 59..482 | 100 | <- | Minus |
2L | 20473269..20473326 | 1..58 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:14 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20472793..20473216 | 59..482 | 100 | <- | Minus |
2L | 20473269..20473326 | 1..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:44 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20472793..20473216 | 59..482 | 100 | <- | Minus |
arm_2L | 20473269..20473326 | 1..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:19:46 Download gff for
MIP06488.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20472793..20473216 | 59..482 | 100 | <- | Minus |
2L | 20473269..20473326 | 1..58 | 100 | | Minus |
MIP06488.pep Sequence
Translation from 2 to 295
> MIP06488.pep
KNLLIAIMCVRLVGSALCCCCKLGLKCLCIFACSTVGVLAIVALVVYFCF
FHNKSEDSTTKSLSDSTIDKSLKDSITTATEAPSLVRGYLQQMIERI*
MIP06488.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43233-PA | 90 | CG43233-PA | 1..90 | 8..97 | 467 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:22:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA26029-PA | 100 | GA26029-PA | 1..59 | 8..67 | 141 | 58.3 | Plus |
MIP06488.hyp Sequence
Translation from 2 to 295
> MIP06488.hyp
KNLLIAIMCVRLVGSALCCCCKLGLKCLCIFACSTVGVLAIVALVVYFCF
FHNKSEDSTTKSLSDSTIDKSLKDSITTATEAPSLVRGYLQQMIERI*
MIP06488.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43233-PA | 90 | CG43233-PA | 1..90 | 8..97 | 467 | 100 | Plus |