Clone MIP06850 Report

Search the DGRC for MIP06850

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:68
Well:50
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG43247-RA
Protein status:MIP06850.pep: wuzgold
Sequenced Size:482

Clone Sequence Records

MIP06850.complete Sequence

482 bp assembled on 2009-03-10

GenBank Submission: BT072844.1

> MIP06850.complete
GTGGTCGAAGGACTTCATCTTATTTCCCACCCAAGTTGGCCACATGTTCG
ATTTCCGGCTGCCACCTTTTCATAACCCACAGAACTGTGGCCAGGACTAC
TTTTATGGGAATCGGACCGAGCTGAGCTGAACTGAGGCGAGGCGAGGAGA
ACTGAATGTGGACGTCTCGAAGGTCGACCGGGCAATTACTTGGCTAAAAT
GCTCCGTACCAACTGGTGCAATTGCAGCTACCGCTTTTCCTCCTTGCATC
CTTTTCTCGATTCGTCCTTGGCTTGTGCAATTTTCTTTGGGCACAACTGT
CATTATGGACTTTGGTCAGGCTGCATTCAAGATTTGTTGCAATTTATATT
TGCCGTGGTGGCTGGGGAGGCGAAACCGCAGCCTCCTTCTGCGCTCGGCA
TGTGGAAAGATATTTCCCAATAAAAATTGGGTTAGTTGCGGAATTTCCGT
ATATTAAATATTAAAAAAAAAAAAAAAAAAAA

MIP06850.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
MB8.chr3L.pasa.53.a 653 MB8.chr3L.pasa.53.a 102..564 1..463 2315 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15322487..15322915 34..462 2100 99.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:07:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15332449..15332878 34..463 2150 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15325549..15325978 34..463 2150 100 Plus
3L 28103327 3L 15325447..15325481 1..35 175 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:30:56 has no hits.

MIP06850.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:31:38 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15322385..15322419 1..35 100 -> Plus
chr3L 15322489..15322915 36..462 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:54:05 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
CG43247-RA 1..225 199..423 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:05 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
CG43247-RA 102..563 1..462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:38 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15332347..15332381 1..35 100 -> Plus
3L 15332451..15332877 36..462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:38 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15332347..15332381 1..35 100 -> Plus
3L 15332451..15332877 36..462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:38 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15332347..15332381 1..35 100 -> Plus
3L 15332451..15332877 36..462 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:05 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15325447..15325481 1..35 100 -> Plus
arm_3L 15325551..15325977 36..462 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:13:36 Download gff for MIP06850.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15325551..15325977 36..462 100   Plus
3L 15325447..15325481 1..35 100 -> Plus

MIP06850.pep Sequence

Translation from 198 to 422

> MIP06850.pep
MLRTNWCNCSYRFSSLHPFLDSSLACAIFFGHNCHYGLWSGCIQDLLQFI
FAVVAGEAKPQPPSALGMWKDISQ*
Sequence MIP06850.pep has no blast hits.

MIP06850.hyp Sequence

Translation from 198 to 422

> MIP06850.hyp
MLRTNWCNCSYRFSSLHPFLDSSLACAIFFGHNCHYGLWSGCIQDLLQFI
FAVVAGEAKPQPPSALGMWKDISQ*
Sequence MIP06850.hyp has no blast hits.