Clone MIP06971 Report

Search the DGRC for MIP06971

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:69
Well:71
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG42570-RA
Protein status:MIP06971.pep: gold
Sequenced Size:1998

Clone Sequence Records

MIP06971.complete Sequence

1998 bp assembled on 2009-10-20

GenBank Submission: BT100141.1

> MIP06971.complete
CACAAAACGAATCTTTTAGATCTTTTCCCAATAACTTTTCGTGGTCGTGG
ACAAATTTGCAGTGAAATATACTGTTTTAAAACATAGTAGACCTATGAGT
TACGATGTATGTATCGGACGAGCATCGCTATTACCGAAAGGCGCGAAGAA
AGTTTTCTTTGAAGGCATACGGCTTATTTGTTCTGTGGCTCATTTTAGCT
CTGGCCCAATGGCTGGTAATAGCTTTTATAGAGGATGCAAGGACAACTTT
CACGTCGTTATACTATATCTGCCTTGCGACTTTTGCTTTGGCCATCTTGA
TCTTTGCGCTCTTTATTTTTATTGAGAAGGTTCGATTCATCAAAGGTCTC
AACTTTATCATGTCACTGATAATAGTGGAGCTTCAGATCATATCCACATT
TGCTCTAGTCGCAATCAGTTGGTGGCCGGATGTCCTGACATTTTTTGCAG
TCGCATTAATTTTAATGGTACTCTTTCTTCTAATAGGAGTATTTCTACCA
GCACGAGCCGACCTCACCCTAGATATAGCGGTTTTATTTATATTAGCATT
TCTTTTCCTGATTGTGGCCTGTTTTATACTATTATTTGAACTACTTGTGA
GAATAACCATTCCCTATGCCTATTTAGTGGTGGAAATATCTATAACCTTT
ACGATTCTACTGTTCGTAATGTACCATGCCCAAACAATCAATGGAAACCG
ATTTGCTGAGATGCGATTGAACGACTTTTTCTTGGGATCTCTGATTCTGT
TTCACGACTTCCTTATCATTTTCTGGCTGACATTCTATTGGCAGATCCAT
TATAGACCTATCACGCCTGATACCTGGTTAGAGACATCTACACCATATTA
CAATGGTACAATCAGAACCAACGATACTTATAAAAGTCTTGATGGTGATG
GAACAACACTAGCACCGTGGTTCACCAGAGGATTTGATGACGGTTATGGT
GGTGATTCAAATGCAAAAGACTATCCTGAGATTCCAAGCGGTAGAGGAAA
TCCAGGAAATCGGAACCCTTATGACACAGATTCCATGGACGGGCACAGGC
CAAATAATAGGGATTCCACAAAAGATTGGTCAGTTTACAATCAAAGGCCA
AAGAATGGATTTAGGAATCGTGGAAGGTCCCGAACTAAAGGTCCGGAAAC
GAAAACCGTACACCACAGACATCGTAAACCGGACGAATGGGACCCTGAAT
ATATTACGCAAGGTATCGACATGGTAGTGCCCTTTGATGACCGTTATGGC
GATAATTCAAAAGATGTCATAGAAGATGATGAAGTGCATCGGATTCCCGA
TGAGGATATAGGTCCCACAATGGAGGATGATTACACGGATGTACCCATTA
ATGTTCATTTTGGACAGCCGATTGATAAGTTTTATCAAAATCCCAACACT
GGACCAAAAGTAGATATTGGTGATGCCGAAGGAAAATCGGCAGCTGGTTT
TGGTGATCCAAACGTCGATTTTCCTCCAGCAGACTACCAGCCAAAGTCAA
CCGACGCTTCACATATATATATTATTCCTAAGGCAAGACCCACCAGGAGG
GATTCTTATTCAATGAATAATGAACGACAAAATTACATTGAAAATGAAAA
GATTGAAAGTGTTACTCCTGCTGACGAGAAAAGTGATCTAAGTCTTCGAC
AAAATAAAAGGGATTACAACTTGCAAAAGGATGAAATGACAGGACTAACC
ACACAACAATTTTCATTGGGACGAAAAGACTTTCATGGAGTAAGCCCACC
TCCTCCATGGGAAGAGCTATCCGATGATGAAATTCGAAAATTATTAGACC
AGAGGATCCATGAAGATAAGTATCGACCAAATGCAGACCGTTGGGCTGAG
CCATTAATTACCAGAGAGCCTTATCCAATAAACCTTCCAGACTATGAAAA
GCTTGTAATGAATGTCAGTTCAAGCATATTGCAATAGGCTCTTAAAGCAG
TAAACAATATATGAATTATTTTTCTCTTAAAAAAAAAAAAAAAAAAAA

MIP06971.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG42570-RA 2161 CG42570-RA 156..2132 1..1977 9870 99.9 Plus
CG42570.a 1830 CG42570.a 1..1830 105..1937 9095 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15708840..15709920 897..1977 5180 98.6 Plus
chr3L 24539361 chr3L 15708549..15708784 662..897 1165 99.6 Plus
chr3L 24539361 chr3L 15707666..15707894 1..229 1145 100 Plus
chr3L 24539361 chr3L 15708342..15708497 507..662 780 100 Plus
chr3L 24539361 chr3L 15707945..15708092 230..377 740 100 Plus
chr3L 24539361 chr3L 15708151..15708283 375..507 665 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:08:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15718993..15720073 897..1977 5390 99.9 Plus
3L 28110227 3L 15718702..15718937 662..897 1180 100 Plus
3L 28110227 3L 15717819..15718047 1..229 1145 100 Plus
3L 28110227 3L 15718495..15718650 507..662 780 100 Plus
3L 28110227 3L 15718098..15718245 230..377 740 100 Plus
3L 28110227 3L 15718304..15718436 375..507 665 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15712093..15713173 897..1977 5390 99.9 Plus
3L 28103327 3L 15711802..15712037 662..897 1180 100 Plus
3L 28103327 3L 15710919..15711147 1..229 1145 100 Plus
3L 28103327 3L 15711595..15711750 507..662 780 100 Plus
3L 28103327 3L 15711198..15711345 230..377 740 100 Plus
3L 28103327 3L 15711404..15711536 375..507 665 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:22:56 has no hits.

MIP06971.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:23:52 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15708151..15708282 375..506 100 -> Plus
chr3L 15708342..15708497 507..662 100 -> Plus
chr3L 15708550..15708784 663..897 99 -> Plus
chr3L 15707666..15707894 1..229 100 -> Plus
chr3L 15707945..15708089 230..374 100 -> Plus
chr3L 15708841..15709920 898..1978 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:46:20 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1833 105..1937 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:36:22 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1833 105..1937 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:30:38 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1833 105..1937 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:46:20 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1977 1..1977 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:22 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1977 1..1977 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:30:38 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
CG42570-RA 1..1977 1..1977 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:52 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15717819..15718047 1..229 100 -> Plus
3L 15718098..15718242 230..374 100 -> Plus
3L 15718304..15718435 375..506 100 -> Plus
3L 15718495..15718650 507..662 100 -> Plus
3L 15718703..15718937 663..897 100 -> Plus
3L 15718994..15720073 898..1978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:52 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15717819..15718047 1..229 100 -> Plus
3L 15718098..15718242 230..374 100 -> Plus
3L 15718304..15718435 375..506 100 -> Plus
3L 15718495..15718650 507..662 100 -> Plus
3L 15718703..15718937 663..897 100 -> Plus
3L 15718994..15720073 898..1978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:52 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15717819..15718047 1..229 100 -> Plus
3L 15718098..15718242 230..374 100 -> Plus
3L 15718304..15718435 375..506 100 -> Plus
3L 15718495..15718650 507..662 100 -> Plus
3L 15718703..15718937 663..897 100 -> Plus
3L 15718994..15720073 898..1978 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:22 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15710919..15711147 1..229 100 -> Plus
arm_3L 15711198..15711342 230..374 100 -> Plus
arm_3L 15711404..15711535 375..506 100 -> Plus
arm_3L 15711595..15711750 507..662 100 -> Plus
arm_3L 15711803..15712037 663..897 100 -> Plus
arm_3L 15712094..15713173 898..1978 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:26:25 Download gff for MIP06971.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15710919..15711147 1..229 100 -> Plus
3L 15711198..15711342 230..374 100 -> Plus
3L 15711404..15711535 375..506 100 -> Plus
3L 15711595..15711750 507..662 100 -> Plus
3L 15711803..15712037 663..897 100 -> Plus
3L 15712094..15713173 898..1978 99   Plus

MIP06971.pep Sequence

Translation from 104 to 1936

> MIP06971.pep
MYVSDEHRYYRKARRKFSLKAYGLFVLWLILALAQWLVIAFIEDARTTFT
SLYYICLATFALAILIFALFIFIEKVRFIKGLNFIMSLIIVELQIISTFA
LVAISWWPDVLTFFAVALILMVLFLLIGVFLPARADLTLDIAVLFILAFL
FLIVACFILLFELLVRITIPYAYLVVEISITFTILLFVMYHAQTINGNRF
AEMRLNDFFLGSLILFHDFLIIFWLTFYWQIHYRPITPDTWLETSTPYYN
GTIRTNDTYKSLDGDGTTLAPWFTRGFDDGYGGDSNAKDYPEIPSGRGNP
GNRNPYDTDSMDGHRPNNRDSTKDWSVYNQRPKNGFRNRGRSRTKGPETK
TVHHRHRKPDEWDPEYITQGIDMVVPFDDRYGDNSKDVIEDDEVHRIPDE
DIGPTMEDDYTDVPINVHFGQPIDKFYQNPNTGPKVDIGDAEGKSAAGFG
DPNVDFPPADYQPKSTDASHIYIIPKARPTRRDSYSMNNERQNYIENEKI
ESVTPADEKSDLSLRQNKRDYNLQKDEMTGLTTQQFSLGRKDFHGVSPPP
PWEELSDDEIRKLLDQRIHEDKYRPNADRWAEPLITREPYPINLPDYEKL
VMNVSSSILQ*

MIP06971.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24093-PA 620 GF24093-PA 1..620 1..610 946 40 Plus
Dana\GF12132-PA 314 GF12132-PA 17..231 16..234 514 50 Plus
Dana\GF12965-PA 243 GF12965-PA 4..222 5..227 323 39.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15926-PA 621 GG15926-PA 1..621 1..610 2258 72.7 Plus
Dere\GG25223-PA 290 GG25223-PA 11..285 10..300 571 46.4 Plus
Dere\GG15925-PA 275 GG15925-PA 68..246 91..267 356 43.6 Plus
Dere\GG22518-PA 270 GG22518-PA 6..211 5..214 273 37.1 Plus
Dere\GG15003-PA 277 GG15003-PA 56..204 35..225 180 26.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25311-PA 501 GH25311-PA 6..247 5..246 698 56.6 Plus
Dgri\GH25311-PB 338 GH25311-PB 6..248 5..247 662 56.4 Plus
Dgri\GH20115-PA 247 GH20115-PA 8..230 10..236 476 48.5 Plus
Dgri\GH24931-PA 267 GH24931-PA 1..221 3..227 287 36 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42570-PA 610 CG42570-PA 1..610 1..610 3256 100 Plus
CG42570-PB 609 CG42570-PB 1..609 1..610 3238 99.8 Plus
CG12209-PA 285 CG12209-PA 9..281 8..301 620 43.9 Plus
CG42571-PB 292 CG42571-PB 8..259 14..263 550 42.1 Plus
CG34315-PB 266 CG34315-PB 4..224 3..227 431 39.1 Plus
CG32391-PC 244 CG32391-PC 17..234 3..230 195 27 Plus
CG34030-PA 273 CG34030-PA 40..199 13..225 190 26.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14496-PA 329 GI14496-PA 6..248 5..247 629 54.7 Plus
Dmoj\GI11688-PA 401 GI11688-PA 1..299 1..242 560 48.5 Plus
Dmoj\GI20209-PA 278 GI20209-PA 10..227 12..233 398 40.5 Plus
Dmoj\GI18395-PA 266 GI18395-PA 10..224 9..227 310 37 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25039-PA 273 GL25039-PA 1..247 1..247 677 61.5 Plus
Dper\GL10484-PA 281 GL10484-PA 9..241 8..240 481 45.1 Plus
Dper\GL20108-PA 264 GL20108-PA 13..228 12..231 419 44.8 Plus
Dper\GL25028-PA 253 GL25028-PA 97..195 136..239 226 44.2 Plus
Dper\GL25150-PA 169 GL25150-PA 7..153 82..232 176 30.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23633-PA 273 GA23633-PA 1..247 1..247 680 61.5 Plus
Dpse\GA24384-PA 281 GA24384-PA 9..241 8..240 478 45.1 Plus
Dpse\GA24933-PA 264 GA24933-PA 13..245 12..250 443 45.2 Plus
Dpse\GA23632-PA 276 GA23632-PA 23..270 43..307 390 36.5 Plus
Dpse\GA30488-PA 251 GA30488-PA 8..219 8..223 354 40.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25557-PA 286 GM25557-PA 1..184 1..186 762 90.9 Plus
Dsec\GM20542-PA 285 GM20542-PA 17..279 16..302 521 43.6 Plus
Dsec\GM25556-PA 145 GM25556-PA 1..101 154..252 238 46.5 Plus
Dsec\GM20304-PA 192 GM20304-PA 4..183 3..186 236 34.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14570-PA 382 GD14570-PA 5..254 13..264 1107 91.3 Plus
Dsim\GD25999-PA 285 GD25999-PA 17..285 16..305 523 43.4 Plus
Dsim\GD25784-PA 266 GD25784-PA 4..209 3..212 293 39 Plus
Dsim\GD13092-PA 284 GD13092-PA 59..210 32..225 177 27.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11362-PA 903 GJ11362-PA 11..242 10..241 736 59.5 Plus
Dvir\GJ20158-PA 259 GJ20158-PA 8..231 10..237 473 44.3 Plus
Dvir\GJ21472-PA 270 GJ21472-PA 11..225 9..227 355 38.8 Plus
Dvir\GJ12240-PA 89 GJ12240-PA 1..86 143..230 150 35.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15448-PA 264 GK15448-PA 6..243 8..245 776 62.6 Plus
Dwil\GK18017-PA 279 GK18017-PA 17..231 16..234 498 50.2 Plus
Dwil\GK17542-PA 321 GK17542-PA 51..241 35..228 242 32.8 Plus
Dwil\GK17543-PA 158 GK17543-PA 66..158 136..230 148 33.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22273-PA 497 GE22273-PA 1..452 1..450 1920 81.7 Plus
Dyak\GE23162-PA 270 GE23162-PA 1..265 1..265 1129 85.3 Plus
Dyak\GE21688-PA 286 GE21688-PA 17..264 16..257 528 46.8 Plus
Dyak\GE22272-PA 289 GE22272-PA 6..263 12..267 492 39.5 Plus
Dyak\GE23161-PA 267 GE23161-PA 3..241 31..267 463 40.6 Plus

MIP06971.hyp Sequence

Translation from 104 to 1936

> MIP06971.hyp
MYVSDEHRYYRKARRKFSLKAYGLFVLWLILALAQWLVIAFIEDARTTFT
SLYYICLATFALAILIFALFIFIEKVRFIKGLNFIMSLIIVELQIISTFA
LVAISWWPDVLTFFAVALILMVLFLLIGVFLPARADLTLDIAVLFILAFL
FLIVACFILLFELLVRITIPYAYLVVEISITFTILLFVMYHAQTINGNRF
AEMRLNDFFLGSLILFHDFLIIFWLTFYWQIHYRPITPDTWLETSTPYYN
GTIRTNDTYKSLDGDGTTLAPWFTRGFDDGYGGDSNAKDYPEIPSGRGNP
GNRNPYDTDSMDGHRPNNRDSTKDWSVYNQRPKNGFRNRGRSRTKGPETK
TVHHRHRKPDEWDPEYITQGIDMVVPFDDRYGDNSKDVIEDDEVHRIPDE
DIGPTMEDDYTDVPINVHFGQPIDKFYQNPNTGPKVDIGDAEGKSAAGFG
DPNVDFPPADYQPKSTDASHIYIIPKARPTRRDSYSMNNERQNYIENEKI
ESVTPADEKSDLSLRQNKRDYNLQKDEMTGLTTQQFSLGRKDFHGVSPPP
PWEELSDDEIRKLLDQRIHEDKYRPNADRWAEPLITREPYPINLPDYEKL
VMNVSSSILQ*

MIP06971.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG42570-PA 610 CG42570-PA 1..610 1..610 3256 100 Plus
CG42570-PB 609 CG42570-PB 1..609 1..610 3238 99.8 Plus
CG12209-PA 285 CG12209-PA 9..281 8..301 620 43.9 Plus
CG42571-PB 292 CG42571-PB 8..259 14..263 550 42.1 Plus
CG34315-PB 266 CG34315-PB 4..224 3..227 431 39.1 Plus