Clone Sequence Records
MIP06976.complete Sequence
550 bp assembled on 2011-03-11
GenBank Submission: BT126228.1
> MIP06976.complete
AAATCAAATTTATTTTTGTACTTCTAAAAATACTGAGACGAAATGAATTG
GTTCAATAATATATGCGAGGAAAGTCGCTTAAAGTTTTTTCCCAATCTTC
AAACAGTCAAAGCTAAGCGTAAATACGAAATTGGCCTGATGAGCGCAGAT
GAGTGCTATAGTTTCATAAAGAAAAACCTGAAGTCCAGAAATGTTGTAGA
AGAAGAAATGTTGTGGAAAGTCCCCATAATTCTTGTGTGTATCGGCTGCA
TAATAGTCATACTATTTGCATTTTGTTTCGCATTTCAGTGTGTGATAACA
AAGGTAAAGACCGCCAAAGTGCCAAAGCGTTTCGATTTCGACATTTGTGA
AGCTGAAAAACCAAAAGCCCAACCAATCCACAAGGCCAGCCAAATTGATC
ACCCAAAGAAAGGAACAAATTGCTGTACTTGTTTAAAATCAAATCTACTT
TGAAGTTGTGTTAACTGAATTTTCTATATATATGTATATAAAAATTATAA
TTATAATTATATATGAAGTCTAGTTATATGCAAAAAAAAAAAAAAAAAAA
MIP06976.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:20:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 17626513..17627043 | 1..531 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:20:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17627859..17628395 | 1..537 | 2670 | 99.8 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17627859..17628395 | 1..537 | 2670 | 99.8 | Plus |
Blast to na_te.dros performed on 2019-03-16 22:20:43 has no hits.
MIP06976.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:21:28 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 17626513..17627043 | 1..531 | 92 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-11 12:43:44 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..411 | 43..453 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:55:11 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..411 | 43..453 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:27:29 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..411 | 43..453 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-11 12:43:44 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..531 | 1..531 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:55:11 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..531 | 1..531 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:29 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43054-RA | 1..531 | 1..531 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:28 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17627859..17628389 | 1..531 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:28 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17627859..17628389 | 1..531 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:28 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17627859..17628389 | 1..531 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:55:11 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17627859..17628389 | 1..531 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:01:10 Download gff for
MIP06976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17627859..17628389 | 1..531 | 100 | | Plus |
MIP06976.hyp Sequence
Translation from 42 to 452
> MIP06976.hyp
MNWFNNICEESRLKFFPNLQTVKAKRKYEIGLMSADECYSFIKKNLKSRN
VVEEEMLWKVPIILVCIGCIIVILFAFCFAFQCVITKVKTAKVPKRFDFD
ICEAEKPKAQPIHKASQIDHPKKGTNCCTCLKSNLL*
MIP06976.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43054-PA | 136 | CG43054-PA | 1..136 | 1..136 | 733 | 100 | Plus |
MIP06976.pep Sequence
Translation from 42 to 452
> MIP06976.pep
MNWFNNICEESRLKFFPNLQTVKAKRKYEIGLMSADECYSFIKKNLKSRN
VVEEEMLWKVPIILVCIGCIIVILFAFCFAFQCVITKVKTAKVPKRFDFD
ICEAEKPKAQPIHKASQIDHPKKGTNCCTCLKSNLL*
MIP06976.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43054-PA | 136 | CG43054-PA | 1..136 | 1..136 | 733 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:28:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL13254-PA | 202 | GL13254-PA | 80..200 | 1..130 | 138 | 31.1 | Plus |