MIP06992.complete Sequence
819 bp assembled on 2009-03-10
GenBank Submission: BT072859.1
> MIP06992.complete
AATAACTTCAAATCGCTCTAGTTGCTCTCCACTATACGCAGTATACTCAG
CCGGGGGAAAATTCCTGGGAAGAAGGGAAAAGCCTGAAATGCTAACTAAG
AAGTTTGAGCTGCTGTTGATGTTTTCGCAGGCATATTTCCCATGCCTTTT
AGTCTCTTCACTACCAGCATAGCTGTAGCTGGTCGGCCTCCAAAGTTCAA
GAGCTTTTCGGCAATAACTTTAAATAGAAGAGACCCATCTTGTGCCCAAA
TGGAATTCGGTGCGGCGAAAACCACGACGACAGGGTGGAAAACAAGAAAC
GGGCATCATTAAAATACTGTTACCGGCCTCTGGTCTCTGGACTTTGGACT
CTGGACTTTGGGCAATGCCAGTGCTCGACCCCGAAAACTCTTCTGTGTCG
ACAGAGGGCAACCGCAACCAAGATTGTTCAGGCATATACCCTTTTTTAAT
TTGCAACATGTCATTGGCAGAAAGACAAGTAAAAGGGACGCAGTAGCGGG
CCAAAATCGGGGGGCACCACACCGCCCTGCCACGCCCCCGTCAGCTCACG
CTTTGTTGCGCCTTTTGTAGCTGGGCCTTCTCTTGGTTTTTCCCCACGCT
CCTTTTTTGCGCTTTGGCCAAATAACCCAAGAAAAAACAGAATTAGCAGC
AACGCCGACGACAGCGATGGGAAAAACAGAAGATGAAGCGCAGGCAAAAC
AGGACACGGCCGAAATTCACAGCGAGAGGAGGCCGAAAAGTTGCAGAACA
AGTTTCAAAAGCCTACAAGCAAAACAACAATAAAGCCAAATATTCTATCA
AAAAAAAAAAAAAAAAAAA
MIP06992.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:26:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nc_3186.a | 792 | nc_3186.a | 6..792 | 13..799 | 3935 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:09:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2L | 23010047 | chr2L | 15214357..15214904 | 252..799 | 2725 | 99.8 | Plus |
| chr2L | 23010047 | chr2L | 15214048..15214288 | 13..253 | 1205 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:08:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15215613..15216165 | 252..804 | 2765 | 100 | Plus |
| 2L | 23513712 | 2L | 15215303..15215543 | 13..253 | 1205 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15215613..15216165 | 252..804 | 2765 | 100 | Plus |
| 2L | 23513712 | 2L | 15215303..15215543 | 13..253 | 1205 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 11:09:40 has no hits.
MIP06992.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:10:28 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2L | 15214048..15214287 | 13..252 | 100 | -> | Plus |
| chr2L | 15214358..15214904 | 253..799 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:37:26 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43230-RA | 1..171 | 142..312 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:14 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43230-RA | 1..171 | 142..312 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:26 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43230-RA | 1..799 | 1..799 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:14 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43230-RA | 1..799 | 1..799 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:28 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15215303..15215542 | 13..252 | 100 | -> | Plus |
| 2L | 15215614..15216160 | 253..799 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:28 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15215303..15215542 | 13..252 | 100 | -> | Plus |
| 2L | 15215614..15216160 | 253..799 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:28 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15215303..15215542 | 13..252 | 100 | -> | Plus |
| 2L | 15215614..15216160 | 253..799 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:26 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15215303..15215542 | 13..252 | 100 | -> | Plus |
| arm_2L | 15215614..15216160 | 253..799 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:13:50 Download gff for
MIP06992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15215303..15215542 | 13..252 | 100 | -> | Plus |
| 2L | 15215614..15216160 | 253..799 | 100 | | Plus |
MIP06992.pep Sequence
Translation from 141 to 311
> MIP06992.pep
MPFSLFTTSIAVAGRPPKFKSFSAITLNRRDPSCAQMEFGAAKTTTTGWK
TRNGHH*
MIP06992.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43230-PA | 56 | CG43230-PA | 1..56 | 1..56 | 300 | 100 | Plus |
MIP06992.hyp Sequence
Translation from 141 to 311
> MIP06992.hyp
MPFSLFTTSIAVAGRPPKFKSFSAITLNRRDPSCAQMEFGAAKTTTTGWK
TRNGHH*
MIP06992.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:02:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43230-PA | 56 | CG43230-PA | 1..56 | 1..56 | 300 | 100 | Plus |
