MIP07141.complete Sequence
338 bp assembled on 2009-03-10
GenBank Submission: BT072869.1
> MIP07141.complete
AGTTTCGAAACTAAAGTGACGGCATGAAGATCCATCTCATATTTGTTATA
GTATCTCTGGTATTGGCGAAAACCATTGCAGACGAATGCCTTACCTGTGA
CTGGAAAAGTAATATCCATTGTGGAAAGGTTGCTGATGGCTCATGTGTGT
TTACTGCTCTGAATCGATGCCAAGTTGAAAGAATTTCATGCCGTCGAGAG
CAAAAAAAGCTGAAACCATTCACCGAAATTGTTAAAGGAAAGTGCCCTAA
GGACAAAGAAAAGTGCGCCAAGATGTAAAATAAAATCATGGTTCATTTCA
TCAATTAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP07141.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:26:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ac-RA | 332 | Sfp26Ac-RA | 25..332 | 1..308 | 1540 | 100 | Plus |
Sfp26Ac.a | 671 | Sfp26Ac.a | 25..332 | 1..308 | 1540 | 100 | Plus |
DMG8-chr2L.11.009.c | 438 | DMG8-chr2L.11.009.c | 1..69 | 163..95 | 345 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:19:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 5883557..5883728 | 216..45 | 860 | 100 | Minus |
chr2L | 23010047 | chr2L | 5883402..5883493 | 308..217 | 460 | 100 | Minus |
chr2L | 23010047 | chr2L | 5883781..5883825 | 45..1 | 225 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:08:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5884506..5884677 | 216..45 | 860 | 100 | Minus |
2L | 23513712 | 2L | 5884351..5884442 | 308..217 | 460 | 100 | Minus |
2L | 23513712 | 2L | 5884730..5884774 | 45..1 | 225 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:43:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5884506..5884677 | 216..45 | 860 | 100 | Minus |
2L | 23513712 | 2L | 5884351..5884442 | 308..217 | 460 | 100 | Minus |
2L | 23513712 | 2L | 5884730..5884774 | 45..1 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 05:19:50 has no hits.
MIP07141.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:20:50 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 5883401..5883493 | 217..309 | 98 | <- | Minus |
chr2L | 5883557..5883727 | 46..216 | 100 | <- | Minus |
chr2L | 5883781..5883825 | 1..45 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:52:21 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..255 | 24..278 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:39:22 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..255 | 24..278 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:55:09 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..255 | 24..278 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:00:40 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..255 | 24..278 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-10 14:34:54 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..308 | 1..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:39:22 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..308 | 1..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:09 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..308 | 1..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:00:40 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ac-RA | 1..308 | 1..309 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:20:50 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5884350..5884442 | 217..309 | 98 | <- | Minus |
2L | 5884506..5884676 | 46..216 | 100 | <- | Minus |
2L | 5884730..5884774 | 1..45 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:20:50 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5884350..5884442 | 217..309 | 98 | <- | Minus |
2L | 5884506..5884676 | 46..216 | 100 | <- | Minus |
2L | 5884730..5884774 | 1..45 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:20:50 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5884350..5884442 | 217..309 | 98 | <- | Minus |
2L | 5884506..5884676 | 46..216 | 100 | <- | Minus |
2L | 5884730..5884774 | 1..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:09 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5884350..5884442 | 217..309 | 98 | <- | Minus |
arm_2L | 5884506..5884676 | 46..216 | 100 | <- | Minus |
arm_2L | 5884730..5884774 | 1..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:13:25 Download gff for
MIP07141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5884350..5884442 | 217..309 | 98 | <- | Minus |
2L | 5884506..5884676 | 46..216 | 100 | <- | Minus |
2L | 5884730..5884774 | 1..45 | 100 | | Minus |
MIP07141.pep Sequence
Translation from 23 to 277
> MIP07141.pep
MKIHLIFVIVSLVLAKTIADECLTCDWKSNIHCGKVADGSCVFTALNRCQ
VERISCRREQKKLKPFTEIVKGKCPKDKEKCAKM*
MIP07141.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ac-PA | 84 | CG42469-PA | 1..84 | 1..84 | 451 | 100 | Plus |
MIP07141.hyp Sequence
Translation from 23 to 277
> MIP07141.hyp
MKIHLIFVIVSLVLAKTIADECLTCDWKSNIHCGKVADGSCVFTALNRCQ
VERISCRREQKKLKPFTEIVKGKCPKDKEKCAKM*
MIP07141.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:28:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ac-PA | 84 | CG42469-PA | 1..84 | 1..84 | 451 | 100 | Plus |