Clone Sequence Records
MIP07213.complete Sequence
795 bp assembled on 2009-03-17
GenBank Submission: BT072912.1
> MIP07213.complete
CTTGGCTGAGCAGCTCGACGACGTAGAAGAAACAGCTGAGTCAAGGAGCA
ATGGTGCAACAACTTTGCCGGATAGAACCACGTTGGTTGCAACATGATCG
ATAACCAAGGACTTTTCATCTCACCACTGCAGTGTAGCTGCTTCGGCTGT
AACAATTTGCGGAAATTAGCCAAGGTGTTTTATGGTCATCACCATCGACT
CACCCTCTGTCCACTATTACACTCATCGGATAAAGGAGCCGTGGCACTGC
GAAGTGGATTGTTGTCCGGCAACGTGGAAATGTTTACTTTTTCTTCGGTT
TGCTTTTCCAACACTCTGTACCGAACGATGAGCTGCCTTTGGGGGCTTTT
TAATTGAGGTCTAAGCTGTAATTAAGCAGCTCGGCCTTTTGCCATGTGCT
CTAATTCTATTTTTGCAGTTTAATGAAGTCCTTGGCTGCAGGACGTTCCT
CTGTCCGTCGCTTCTTTCGTCCTTTCGTTACCTGTCACCTGGGCAAATTG
GTTGGCATTATTCATTCACTGTCCTTTAAAGCTCTGGCTAAGGCCAGATC
TGGCCTGCCACCCAGCCGTTGTTCTGACCCGGCTTAAATGCCAATATATC
ACTGGCTAACAACGCTGGTTTCCGTCTGCAGGATTTTAGCTCAAACGGGG
CTAATATACAGTTTTGGATGAAGAAATACATAATGCAAACATACATATTT
TTAACATTTTTTGGTTGCTGAGAAATATGTATTATAATTATGATTAAAAA
TGTTTTTGTTGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP07213.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nc_7347.a | 761 | nc_7347.a | 1..761 | 1..761 | 3805 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2R | 21145070 | chr2R | 12623993..12624623 | 764..134 | 3095 | 99.4 | Minus |
| chr2R | 21145070 | chr2R | 12624897..12625036 | 134..1 | 530 | 93.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:08:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:47:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16736811..16737443 | 766..134 | 3165 | 100 | Minus |
| 2R | 25286936 | 2R | 16737717..16737850 | 134..1 | 670 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:44:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25260384 | 2R | 16738010..16738642 | 766..134 | 3165 | 100 | Minus |
| 2R | 25260384 | 2R | 16738916..16739049 | 134..1 | 670 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 14:47:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6843..6938 | 764..665 | 139 | 63 | Minus |
| P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2632..2700 | 763..696 | 117 | 65.2 | Minus |
| blood | 7410 | blood BLOOD 7410bp | 2909..2970 | 758..696 | 114 | 66.7 | Minus |
MIP07213.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:48:48 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2R | 12624897..12625036 | 1..134 | 93 | | Minus |
| chr2R | 12623993..12624622 | 135..764 | 99 | <- | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:40:52 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43104-RA | 1..264 | 94..357 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:37:22 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43104-RA | 1..264 | 94..357 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:40:52 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43104-RA | 1..764 | 1..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:37:22 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43104-RA | 1..764 | 1..764 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:48:48 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16736813..16737442 | 135..764 | 100 | <- | Minus |
| 2R | 16737717..16737850 | 1..134 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:48:48 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16736813..16737442 | 135..764 | 100 | <- | Minus |
| 2R | 16737717..16737850 | 1..134 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:48:48 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16736813..16737442 | 135..764 | 100 | <- | Minus |
| 2R | 16737717..16737850 | 1..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:37:22 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12625222..12625355 | 1..134 | 100 | | Minus |
| arm_2R | 12624318..12624947 | 135..764 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:15:17 Download gff for
MIP07213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16738916..16739049 | 1..134 | 100 | | Minus |
| 2R | 16738012..16738641 | 135..764 | 100 | <- | Minus |
MIP07213.hyp Sequence
Translation from 93 to 356
> MIP07213.hyp
MIDNQGLFISPLQCSCFGCNNLRKLAKVFYGHHHRLTLCPLLHSSDKGAV
ALRSGLLSGNVEMFTFSSVCFSNTLYRTMSCLWGLFN*
Sequence MIP07213.hyp has no blast hits.
MIP07213.pep Sequence
Translation from 93 to 356
> MIP07213.pep
MIDNQGLFISPLQCSCFGCNNLRKLAKVFYGHHHRLTLCPLLHSSDKGAV
ALRSGLLSGNVEMFTFSSVCFSNTLYRTMSCLWGLFN*
Sequence MIP07213.pep has no blast hits.
