Clone MIP08013 Report

Search the DGRC for MIP08013

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:80
Well:13
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptMpcp-RA
Protein status:MIP08013.pep: gold
Sequenced Size:1330

Clone Sequence Records

MIP08013.complete Sequence

1330 bp assembled on 2011-08-30

GenBank Submission: BT128860.1

> MIP08013.complete
GCTAACGTTGCTGACGAATACCGACCCCAGAACAAGAACAGAATCAAGAT
GTTCTCCAGCTTCTTTGAAACTGCCCGGAACTCGCCATTCCGCACCCCCA
TGTCGATGGCAAGATGCGATGCCGCCGCCCCAGTGGTGGAACCCCAGCCG
GTTGAGGGTCGCCAGATCGCCGCCGCCGCTACCCCGGTGGCCAACCAGCA
GGATTCGTGCGAATTCGGCAGCACCAAGTACTTCGCTCTGTGCGGAATTG
GTGGCATTCTCAGCTGCGGCACCACCCACACCTTCGTGGTCCCACTGGAT
CTGGTGAAGTGCCGTCTGCAGGTCGACCAGGCCAAGTACAAGAATCTGGT
GCACGGATTCAAGGTCACCGTGGCGGAGGAGGGCGCCCGCGGACTGGCTA
AGGGCTGGTTCCCCACTCTGCTCGGCTACTCGGCACAGGGTCTGTGCAAG
TTCGGTCTGTACGAGTTGTTCAAGGTGAAGTACGCCGAAATCATTGGCGA
GGAGAACGCCTACCTGTACCGCACCTCCTTGTATCTGGCTGCTTCCGCTT
CGGCCGAGTTCTTCGCCGATATCGCTCTGGCGCCGTTCGAGGCCGCCAAG
GTGAAGATCCAGACTATTCCCGGATACGCCAACAACTTCCGCGAGGCAGT
GCCCAAGATGCTAAAGGAGGAGGGCGTCAATGCCTTCTACAAGGGTCTGG
TTCCCCTGTGGATGCGACAGATCCCATACACCATGATGAAGTTCGCTTGC
TTCGAGCGCACCGTGGAGCTGCTCTACAAGTATGTGGTGCCCAAGCCTCG
TGCCGACTGCACCAAGGGCGAGCAGCTGATCGTGACCTTCGCCGCTGGCT
ACATCGCCGGTGTGTTCTGTGCCGTGGTGTCGCATCCCGCTGATGTGGTG
GTGTCCAAGCTGAACCAGGCCAAGGGAGCTAGCGCCATCAGCGTGGCCAA
GTCGCTGGGCTTCAGTGGCATGTGGAACGGATTGACTCCTCGTATTATCA
TGATCGGTACCCTGACCGCTCTGCAGTGGTTCATCTACGATGGTGTGAAG
GTCGCCCTGGGCATTCCCCGCCCACCACCACCAGAGATGCCAGCTAGCCT
GAAGGCCAAGCAGCATTAAGTGGGCTAGTCCAATTGGTTACCTTAAGGAC
AGAGTTCACTAGTTGGAGCGATTGTGGGCAGACACAGGAGCAACATACTT
TTACTTTCTAACGAATTTCGGTTTCAGTATAGCGAAAATGCTTTATACTT
GTTTCTCAGCAAGAATACATTAATGTTGCGTGTGTGCCATTGCACATGTA
CATTCCAAAACAAAAAAAAAAAAAAAAAAA

MIP08013.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 14529661..14530192 780..1311 2645 99.8 Plus
chr3L 24539361 chr3L 14528112..14528530 21..439 2095 100 Plus
chr3L 24539361 chr3L 14528834..14529180 436..782 1720 99.7 Plus
chr2R 21145070 chr2R 16166443..16167194 959..208 1465 79.7 Minus
chr2R 21145070 chr2R 16166245..16166336 1091..1000 205 81.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14539553..14540086 780..1313 2670 100 Plus
3L 28110227 3L 14538004..14538422 21..439 2095 100 Plus
3L 28110227 3L 14538726..14539072 436..782 1735 100 Plus
2R 25286936 2R 20279409..20280160 959..208 1465 79.7 Minus
2R 25286936 2R 20279211..20279302 1091..1000 205 81.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 14532653..14533186 780..1313 2670 100 Plus
3L 28103327 3L 14531104..14531522 21..439 2095 100 Plus
3L 28103327 3L 14531826..14532172 436..782 1735 100 Plus
2R 25260384 2R 20280608..20280899 959..668 815 85.2 Minus
2R 25260384 2R 20280907..20281196 660..371 550 79.3 Minus
2R 25260384 2R 20281224..20281359 343..208 245 78.6 Minus
2R 25260384 2R 20280410..20280501 1091..1000 205 81.5 Minus
Blast to na_te.dros performed on 2019-03-15 10:58:31 has no hits.

MIP08013.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:59:16 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 14527791..14527810 1..20 100 -> Plus
chr3L 14528112..14528529 21..438 100 -> Plus
chr3L 14528837..14529177 439..779 99 -> Plus
chr3L 14529661..14530192 780..1311 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-30 13:46:06 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RB 1..1071 49..1119 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:31:33 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RA 1..1071 49..1119 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:17:55 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RA 1..1071 49..1119 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-30 13:46:06 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RA 66..1376 1..1311 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:31:33 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RA 33..1343 1..1311 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:55 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
Mpcp-RA 33..1343 1..1311 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:16 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14537683..14537702 1..20 100 -> Plus
3L 14538004..14538421 21..438 100 -> Plus
3L 14538729..14539069 439..779 100 -> Plus
3L 14539553..14540084 780..1311 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:16 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14537683..14537702 1..20 100 -> Plus
3L 14538004..14538421 21..438 100 -> Plus
3L 14538729..14539069 439..779 100 -> Plus
3L 14539553..14540084 780..1311 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:16 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14537683..14537702 1..20 100 -> Plus
3L 14538004..14538421 21..438 100 -> Plus
3L 14538729..14539069 439..779 100 -> Plus
3L 14539553..14540084 780..1311 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:31:33 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14530783..14530802 1..20 100 -> Plus
arm_3L 14531104..14531521 21..438 100 -> Plus
arm_3L 14531829..14532169 439..779 100 -> Plus
arm_3L 14532653..14533184 780..1311 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:21 Download gff for MIP08013.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14531104..14531521 21..438 100 -> Plus
3L 14531829..14532169 439..779 100 -> Plus
3L 14532653..14533184 780..1311 100   Plus
3L 14530783..14530802 1..20 100 -> Plus

MIP08013.hyp Sequence

Translation from 0 to 1118

> MIP08013.hyp
ANVADEYRPQNKNRIKMFSSFFETARNSPFRTPMSMARCDAAAPVVEPQP
VEGRQIAAAATPVANQQDSCEFGSTKYFALCGIGGILSCGTTHTFVVPLD
LVKCRLQVDQAKYKNLVHGFKVTVAEEGARGLAKGWFPTLLGYSAQGLCK
FGLYELFKVKYAEIIGEENAYLYRTSLYLAASASAEFFADIALAPFEAAK
VKIQTIPGYANNFREAVPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKFAC
FERTVELLYKYVVPKPRADCTKGEQLIVTFAAGYIAGVFCAVVSHPADVV
VSKLNQAKGASAISVAKSLGFSGMWNGLTPRIIMIGTLTALQWFIYDGVK
VALGIPRPPPPEMPASLKAKQH*

MIP08013.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
Mpcp-PC 356 CG4994-PC 1..356 17..372 1856 100 Plus
Mpcp-PB 356 CG4994-PB 1..356 17..372 1856 100 Plus
Mpcp-PA 356 CG4994-PA 1..356 17..372 1856 100 Plus
CG9090-PC 374 CG9090-PC 1..367 17..370 1379 71.1 Plus
CG9090-PB 374 CG9090-PB 1..367 17..370 1379 71.1 Plus

MIP08013.pep Sequence

Translation from 48 to 1118

> MIP08013.pep
MFSSFFETARNSPFRTPMSMARCDAAAPVVEPQPVEGRQIAAAATPVANQ
QDSCEFGSTKYFALCGIGGILSCGTTHTFVVPLDLVKCRLQVDQAKYKNL
VHGFKVTVAEEGARGLAKGWFPTLLGYSAQGLCKFGLYELFKVKYAEIIG
EENAYLYRTSLYLAASASAEFFADIALAPFEAAKVKIQTIPGYANNFREA
VPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKFACFERTVELLYKYVVPKP
RADCTKGEQLIVTFAAGYIAGVFCAVVSHPADVVVSKLNQAKGASAISVA
KSLGFSGMWNGLTPRIIMIGTLTALQWFIYDGVKVALGIPRPPPPEMPAS
LKAKQH*

MIP08013.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24606-PA 362 GF24606-PA 1..359 1..355 1589 91.4 Plus
Dana\GF12674-PA 374 GF12674-PA 1..367 1..354 1260 71.7 Plus
Dana\GF20835-PA 497 GF20835-PA 227..493 82..337 194 25.8 Plus
Dana\GF16639-PA 311 GF16639-PA 32..300 67..331 188 26.1 Plus
Dana\GF23336-PA 693 GF23336-PA 323..577 39..310 182 24.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15684-PA 356 GG15684-PA 1..356 1..356 1870 98 Plus
Dere\GG20871-PA 374 GG20871-PA 1..367 1..354 1271 71.1 Plus
Dere\GG18911-PA 455 GG18911-PA 185..451 82..337 201 26.6 Plus
Dere\GG17216-PA 317 GG17216-PA 33..306 66..331 197 26.3 Plus
Dere\GG11935-PA 682 GG11935-PA 345..564 78..310 180 24.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14749-PA 367 GH14749-PA 1..366 1..356 1542 82.6 Plus
Dgri\GH21821-PA 370 GH21821-PA 1..363 1..354 1304 73.3 Plus
Dgri\GH12025-PA 446 GH12025-PA 176..442 82..337 204 27.4 Plus
Dgri\GH15324-PA 314 GH15324-PA 29..302 66..331 191 25.6 Plus
Dgri\dfl-PA 311 GH13281-PA 21..284 60..317 183 29.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
Mpcp2-PC 356 CG4994-PC 1..356 1..356 1856 100 Plus
Mpcp2-PB 356 CG4994-PB 1..356 1..356 1856 100 Plus
Mpcp2-PA 356 CG4994-PA 1..356 1..356 1856 100 Plus
Mpcp1-PC 374 CG9090-PC 1..367 1..354 1379 71.1 Plus
Mpcp1-PB 374 CG9090-PB 1..367 1..354 1379 71.1 Plus
Mpcp1-PA 374 CG9090-PA 1..367 1..354 1379 71.1 Plus
CG1628-PC 305 CG1628-PC 35..301 82..337 220 28.1 Plus
CG1628-PB 459 CG1628-PB 189..455 82..337 220 28.1 Plus
sea-PE 317 CG6782-PE 33..306 66..331 203 26.3 Plus
sea-PD 317 CG6782-PD 33..306 66..331 203 26.3 Plus
sea-PC 317 CG6782-PC 33..306 66..331 203 26.3 Plus
sea-PA 317 CG6782-PA 33..306 66..331 203 26.3 Plus
aralar1-PB 679 CG2139-PB 342..561 78..310 179 25 Plus
aralar1-PD 682 CG2139-PD 345..564 78..310 179 25 Plus
aralar1-PA 682 CG2139-PA 345..564 78..310 179 25 Plus
aralar1-PF 694 CG2139-PF 345..564 78..310 179 25 Plus
aralar1-PC 695 CG2139-PC 358..577 78..310 179 25 Plus
aralar1-PE 707 CG2139-PE 370..589 78..310 179 25 Plus
mfrn-PA 379 CG4963-PA 23..282 67..337 174 26.1 Plus
CG8026-PD 322 CG8026-PD 121..306 57..242 173 28.8 Plus
CG1907-PA 317 CG1907-PA 24..298 68..331 171 24 Plus
CG4743-PA 297 CG4743-PA 6..291 37..338 170 24.3 Plus
CG18418-PA 311 CG18418-PA 18..296 62..336 169 22.9 Plus
CG8026-PC 203 CG8026-PC 20..200 57..237 165 28.5 Plus
CG8026-PB 304 CG8026-PB 121..301 57..237 165 28.5 Plus
CG7514-PA 301 CG7514-PA 20..282 66..331 161 22.7 Plus
DPCoAC-PE 290 CG4241-PE 98..260 67..223 157 31.3 Plus
DPCoAC-PB 290 CG4241-PB 98..260 67..223 157 31.3 Plus
GC1-PB 321 CG18347-PB 5..307 41..330 157 24.7 Plus
GC1-PA 321 CG18347-PA 5..307 41..330 157 24.7 Plus
DPCoAC-PF 365 CG4241-PF 173..335 67..223 157 31.3 Plus
DPCoAC-PC 365 CG4241-PC 173..335 67..223 157 31.3 Plus
DPCoAC-PA 365 CG4241-PA 173..335 67..223 157 31.3 Plus
Bmcp-PB 303 CG7314-PB 13..301 68..334 154 21.5 Plus
Bmcp-PA 303 CG7314-PA 13..301 68..334 154 21.5 Plus
Dic3-PA 287 CG11196-PA 16..285 66..342 152 22.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11490-PA 364 GI11490-PA 1..361 1..355 1527 84.3 Plus
Dmoj\GI20792-PA 372 GI20792-PA 1..365 1..354 1276 72.9 Plus
Dmoj\GI14298-PA 447 GI14298-PA 177..441 82..337 190 28.4 Plus
Dmoj\GI23120-PA 315 GI23120-PA 20..300 67..336 167 22.8 Plus
Dmoj\GI19815-PA 356 GI19815-PA 140..299 82..237 167 31.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21016-PA 359 GL21016-PA 1..355 1..354 1465 83 Plus
Dper\GL17629-PA 378 GL17629-PA 1..371 1..354 1320 70.4 Plus
Dper\GL14877-PA 464 GL14877-PA 194..460 82..337 206 27.7 Plus
Dper\GL14047-PA 689 GL14047-PA 358..577 78..310 193 26.6 Plus
Dper\GL24959-PA 637 GL24959-PA 344..634 67..339 177 22.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18578-PA 359 GA18578-PA 1..355 1..354 1550 86.4 Plus
Dpse\GA21534-PA 378 GA21534-PA 1..371 1..354 1321 70.4 Plus
Dpse\GA14056-PA 464 GA14056-PA 194..460 82..337 204 27.7 Plus
Dpse\GA15263-PA 689 GA15263-PA 323..577 39..310 193 25.4 Plus
Dpse\GA15123-PA 320 GA15123-PA 27..301 68..331 177 23.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25468-PA 356 GM25468-PA 1..356 1..356 1873 98.3 Plus
Dsec\GM19795-PA 374 GM19795-PA 1..367 1..354 1279 71.1 Plus
Dsec\GM16860-PA 82 GM16860-PA 5..75 284..354 224 77.5 Plus
Dsec\GM26094-PA 317 GM26094-PA 33..306 66..331 206 27 Plus
Dsec\GM12154-PA 682 GM12154-PA 345..564 78..310 185 25.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14491-PA 356 GD14491-PA 1..356 1..356 1873 98.3 Plus
Dsim\GD25287-PA 362 GD25287-PA 1..355 1..354 1224 69.7 Plus
Dsim\GD20656-PA 317 GD20656-PA 33..306 66..331 204 27 Plus
Dsim\GD16025-PA 376 GD16025-PA 110..372 82..337 198 27.8 Plus
Dsim\GD21444-PA 317 GD21444-PA 24..298 68..331 172 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13684-PA 362 GJ13684-PA 1..359 1..355 1543 84 Plus
Dvir\GJ20527-PA 368 GJ20527-PA 1..361 1..354 1291 73.4 Plus
Dvir\GJ19354-PA 454 GJ19354-PA 184..450 82..337 195 27.4 Plus
Dvir\GJ10052-PA 319 GJ10052-PA 54..307 82..331 177 26.5 Plus
Dvir\GJ10609-PA 315 GJ10609-PA 20..300 67..336 176 22.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:30:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20478-PA 363 GK20478-PA 1..355 1..354 1501 86.6 Plus
Dwil\GK19533-PA 376 GK19533-PA 1..368 1..354 1283 72.4 Plus
Dwil\GK19764-PA 443 GK19764-PA 173..439 82..337 201 27.1 Plus
Dwil\GK13128-PA 679 GK13128-PA 310..564 39..310 197 25.9 Plus
Dwil\GK22863-PA 345 GK22863-PA 148..312 82..242 177 29.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:30:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22015-PA 357 GE22015-PA 1..357 1..356 1852 97.5 Plus
Dyak\GE13810-PA 374 GE13810-PA 1..367 1..354 1278 71.4 Plus
Dyak\GE15385-PA 470 GE15385-PA 200..466 82..337 200 27 Plus
Dyak\GE10110-PA 317 GE10110-PA 33..306 66..331 182 27.4 Plus
Dyak\GE23386-PA 682 GE23386-PA 345..564 78..310 181 25.9 Plus