MIP09607.complete Sequence
509 bp assembled on 2009-03-18
GenBank Submission: BT072937.1
> MIP09607.complete
CCAGTCGACCATGGAGGTTCTTTGGCTGCTTCTTTTGGTATCGCATCTGA
GTTCAACGCAGGGCGAGGGAAACTGTACCACCTGTGCTGCTTGGGTCGAG
CGTGCGGTATGTGGCTATAATAATAGATGCTTTACGAGTTTCAAGAGCAC
CTGCGAAATGGAAATGATCAATTGCAAACTACCGGACGTCTACAAATTCA
AAGAAACACCTTATTATGGACACTGCTTTAGATCCACCATACAAAAGTGC
AAGGCCTATGTCCTGTTGCAGCAGCTGAACAAAAAGGACAACTCCGTTGA
AATGTTCGCTTAGTTAGTACCATTTATTAATAATATTGAAAAGCAAATAT
GGCACACAACATACGAAATTGTACCGAATAATATTAAAAAACCATTGTTT
AACCATTAACCCCCTTTTAACTGCCATAATAGGCTGGCAGTAAATAAAAT
ATTTTACTTAAATCAGCCAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
MIP09607.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DMG8-chr3R.40.015.a | 569 | DMG8-chr3R.40.015.a | 97..569 | 1..473 | 2365 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:04:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 22606725..22607003 | 473..195 | 1395 | 100 | Minus |
chr3R | 27901430 | chr3R | 22607067..22607223 | 194..38 | 785 | 100 | Minus |
chr3R | 27901430 | chr3R | 22607276..22607313 | 38..1 | 190 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:11:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26783607..26783887 | 475..195 | 1405 | 100 | Minus |
3R | 32079331 | 3R | 26783951..26784107 | 194..38 | 785 | 100 | Minus |
3R | 32079331 | 3R | 26784160..26784197 | 38..1 | 190 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:44:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 26524438..26524718 | 475..195 | 1405 | 100 | Minus |
3R | 31820162 | 3R | 26524782..26524938 | 194..38 | 785 | 100 | Minus |
3R | 31820162 | 3R | 26524991..26525028 | 38..1 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 15:04:05 has no hits.
MIP09607.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:04:57 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 22606725..22607003 | 195..473 | 100 | <- | Minus |
chr3R | 22607067..22607222 | 39..194 | 100 | <- | Minus |
chr3R | 22607276..22607313 | 1..38 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:41:06 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RA | 1..303 | 11..313 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:01:00 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RB | 1..150 | 164..313 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:25:26 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RB | 1..150 | 164..313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:41:06 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RA | 12..484 | 1..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:01:00 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RC | 12..484 | 1..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:25:26 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RC | 12..484 | 1..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:04:57 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26783951..26784106 | 39..194 | 100 | <- | Minus |
3R | 26784160..26784197 | 1..38 | 100 | | Minus |
3R | 26783609..26783887 | 195..473 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:04:57 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26783951..26784106 | 39..194 | 100 | <- | Minus |
3R | 26784160..26784197 | 1..38 | 100 | | Minus |
3R | 26783609..26783887 | 195..473 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:04:57 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26783951..26784106 | 39..194 | 100 | <- | Minus |
3R | 26784160..26784197 | 1..38 | 100 | | Minus |
3R | 26783609..26783887 | 195..473 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:01:00 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22609331..22609609 | 195..473 | 100 | <- | Minus |
arm_3R | 22609673..22609828 | 39..194 | 100 | <- | Minus |
arm_3R | 22609882..22609919 | 1..38 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:15:33 Download gff for
MIP09607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26524440..26524718 | 195..473 | 100 | <- | Minus |
3R | 26524782..26524937 | 39..194 | 100 | <- | Minus |
3R | 26524991..26525028 | 1..38 | 100 | | Minus |
MIP09607.hyp Sequence
Translation from 0 to 312
> MIP09607.hyp
QSTMEVLWLLLLVSHLSSTQGEGNCTTCAAWVERAVCGYNNRCFTSFKST
CEMEMINCKLPDVYKFKETPYYGHCFRSTIQKCKAYVLLQQLNKKDNSVE
MFA*
MIP09607.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42789-PC | 49 | CG42789-PC | 1..49 | 55..103 | 268 | 100 | Plus |
CG42789-PB | 49 | CG42789-PB | 1..49 | 55..103 | 268 | 100 | Plus |
MIP09607.pep Sequence
Translation from 1 to 312
> MIP09607.pep
QSTMEVLWLLLLVSHLSSTQGEGNCTTCAAWVERAVCGYNNRCFTSFKST
CEMEMINCKLPDVYKFKETPYYGHCFRSTIQKCKAYVLLQQLNKKDNSVE
MFA*
MIP09607.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42789-PC | 49 | CG42789-PC | 1..49 | 55..103 | 268 | 100 | Plus |
CG42789-PB | 49 | CG42789-PB | 1..49 | 55..103 | 268 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM10164-PA | 51 | GM10164-PA | 1..51 | 53..103 | 260 | 92.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18118-PA | 51 | GD18118-PA | 1..51 | 53..103 | 252 | 90.2 | Plus |