MIP09730.complete Sequence
548 bp assembled on 2009-06-19
GenBank Submission: BT072991.2
> MIP09730.complete
GTAAATCAGTCGCAATGAAAAGCTATCTGCTGCTGGGCATATTATTACTA
TATTATCTGTGCATTGATGGACGGAGTGCTGAGATCAAAGAGGAAAGCGA
CAATCCGAGCACAAATATACTTAGCACAACGCTTTCGAAAATTTCTCTGC
AGAACATAACCCGTCTCAATAGATCAAGTTTGGGTGGACGCGTACAAACT
GATCACTTGGGAAGAAATCGGATTTACCATCGGAGAAGAGTTCAAACTAG
ACGTCGAAGAACGAACAAAAATAAGCCCAAACATAAACATTCTCTATAGG
AAGTAGCTTAAATAAAGATACTTTCATGATCCAAACTGTACTAGTAGCTA
CAAGTAGTTTTTAGTTAAACTTCTACACAAAATGTAGACCCATATCCCCA
GAAATATGCAATTGCGAATTGCCTGGGACGCGACTGTACCCAACTGTGAA
CAACAGTGCAGTCATCCCACGCACGTGGCCACCAAATGAAGAGTAAATAA
AATCCCAGTCCTGACTCCCAGGATCCTTCAAAAAAAAAAAAAAAAAAA
MIP09730.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:32:16 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:05:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 26059589..26059967 | 529..151 | 1790 | 98.2 | Minus |
chr3R | 27901430 | chr3R | 26060137..26060229 | 93..1 | 465 | 100 | Minus |
chr3R | 27901430 | chr3R | 26060023..26060084 | 152..91 | 280 | 96.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:11:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:04:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30237093..30237472 | 530..151 | 1900 | 100 | Minus |
3R | 32079331 | 3R | 30237642..30237734 | 93..1 | 465 | 100 | Minus |
3R | 32079331 | 3R | 30237528..30237589 | 152..91 | 310 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 29977924..29978303 | 530..151 | 1900 | 100 | Minus |
3R | 31820162 | 3R | 29978473..29978565 | 93..1 | 465 | 100 | Minus |
3R | 31820162 | 3R | 29978359..29978420 | 152..91 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 23:05:00 has no hits.
MIP09730.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:06:15 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 26060138..26060229 | 1..92 | 100 | | Minus |
chr3R | 26060023..26060082 | 93..152 | 96 | <- | Minus |
chr3R | 26059589..26059965 | 153..529 | 98 | <- | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:26:26 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43448-RA | 1..285 | 15..299 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:18:01 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43448-RA | 1..285 | 15..299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:26:26 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43448-RA | 1..529 | 1..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:18:01 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43448-RA | 1..529 | 1..529 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:15 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30237094..30237470 | 153..529 | 100 | <- | Minus |
3R | 30237528..30237587 | 93..152 | 100 | <- | Minus |
3R | 30237643..30237734 | 1..92 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:15 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30237094..30237470 | 153..529 | 100 | <- | Minus |
3R | 30237528..30237587 | 93..152 | 100 | <- | Minus |
3R | 30237643..30237734 | 1..92 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:15 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30237094..30237470 | 153..529 | 100 | <- | Minus |
3R | 30237528..30237587 | 93..152 | 100 | <- | Minus |
3R | 30237643..30237734 | 1..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:26:26 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26062816..26063192 | 153..529 | 100 | <- | Minus |
arm_3R | 26063250..26063309 | 93..152 | 100 | <- | Minus |
arm_3R | 26063365..26063456 | 1..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:57 Download gff for
MIP09730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29977925..29978301 | 153..529 | 100 | <- | Minus |
3R | 29978359..29978418 | 93..152 | 100 | <- | Minus |
3R | 29978474..29978565 | 1..92 | 100 | | Minus |
MIP09730.pep Sequence
Translation from 2 to 298
> MIP09730.pep
KSVAMKSYLLLGILLLYYLCIDGRSAEIKEESDNPSTNILSTTLSKISLQ
NITRLNRSSLGGRVQTDHLGRNRIYHRRRVQTRRRRTNKNKPKHKHSL*
MIP09730.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43448-PA | 94 | CG43448-PA | 1..94 | 5..98 | 479 | 100 | Plus |
MIP09730.hyp Sequence
Translation from 2 to 298
> MIP09730.hyp
KSVAMKSYLLLGILLLYYLCIDGRSAEIKEESDNPSTNILSTTLSKISLQ
NITRLNRSSLGGRVQTDHLGRNRIYHRRRVQTRRRRTNKNKPKHKHSL*
MIP09730.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43448-PA | 94 | CG43448-PA | 1..94 | 5..98 | 479 | 100 | Plus |