Clone MIP10313 Report

Search the DGRC for MIP10313

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:103
Well:13
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG6184-RA
Protein status:MIP10313.pep: gold
Sequenced Size:3378

Clone Sequence Records

MIP10313.complete Sequence

3378 bp assembled on 2011-09-26

GenBank Submission: BT132638.1

> MIP10313.complete
AATTGGAGTTGCACGAAAAAACAGGAGCCGCAGGATGCTTTAAGATATCC
GCAGCCCATCCTTCGAGCGGCTAAATCAGAGGCTTTCTTGCAGGCGCAGC
TTGGTGGTGCAACCGCGACAGCGGAATCCCTACCCAAGATGATCAAACTG
CGGCCATATGTGCCCTCCAAGAGGATTGCCATACGGGACTCGTCCATCGA
CGAGGATGCGAGCGACGATGTGGAGGACGAGGTGTTCATCAAGGATGCCA
GGTCGGCGAAGCGCAGCGAGGAGCAGGGATTGAAGCGGCCCCTGATGGCG
CCGCGTCGCAAACACAGTCCAGGTTCCGGACCCGGATCCGGCTCGGGATC
AACTCCGATAATGAAGCAGCACAGGAGGCGGCGCTGCTGCCGCTGCTGCG
AACCCTTCTGCTACGCCCTGGCCGCTCTAACGGTACTGTGCGCCCTGCTC
AGCCTGGCGGCCCTCATGCTGACGCTCTTCCCGCTGCCGCTGCAGCGAAT
CCGGCACTGGTGGCGCCCCGATCCCGCCCAGCTGGCGGCCATCTCAGCAG
GCTCCTCCCGCATCTCATATGGCAGCTCGCTGGGCAGTGAGTTTGTTCCC
TGCACCCAGATCAGTGTCCAGAAGCGCTGGTCTCGCAGCTTGGCGCGCAT
GAACAGCGAGAGTCCGCTGCGAGCGGCTGATCTGAATGGCGATGGCATCA
AGGACGTGGTCTTTGGCTATGGAGTGGACGACAACATACCCTACGAGGGC
ATACCCTTGCCGCGCTGCCAGTGCGCCCAGCAAGGGGAGGAGGTGCCCTG
CGAGGGCGGCGTGGTGGCCTTGAACGGACTGGACGGATCCATTCTCTGGC
AATCGTGGAGCGTGGCGAATGTCTTCTCGCTGCACTGCAGCGCGGATGTG
GACGGAGATGGGGGCACCGATTGCGTGGCAGCTGGTAGATTGGGAATGAT
TTACGCCATCAATGGACGCACTGGCTCCGTAATCTGGAGCTTCCGGGAAC
TGGAAGTGGAAACAAACTCGCCCATTGTAATGGATCTGTACACGATTAAT
GTGCTGCGCGATCTGGATGGTGATTCGGTGCCGGAAGTTATAGCCGCCCA
TCTGGAGGAGCGCGAGGAGTCCAAGGCGGGACACATAAAGCTGATTTCGG
GCAAGACGGGCAAGGTAATCCGGAGCATTCCAACGCCGTACCGCGAGGAG
ATGTTCGTGCCCATTCAGCTGATCACGCAGGCGGATGGCACGGAGCTCCT
ACTGATTGTCACCGGCGGGCAGAACACTCCAGGTGGCATTTACTCCTTGC
GACTGCACTCCCTAATGGCGCACACCAGTGAGAAGCACTTCACCCCGCTC
CATCGTCAACAGGGCTCGGGTCTGATGGTGCCCGCCGTGCTAACCGATCT
AAATGGCGATGGTATCTCGGATGTTGTGGTGGCCGCCTTTAATCGGAGCG
TTCTAGCCTTCGATGGAGCCAACTACACCATGATGTGGAACTACACGTTC
CCGGCCAGCGAGTGCGTCAGTGCCATTGTCCCGGGTCTATTTAATCACGA
CAGGGTCACGGATTTCATGGTGAAGTACAACACTGGACCGGGATTCCCGG
TATACTACTACTCGCAAACCACCATCCTGGACGGACGAAACGGACAGCCC
CTGCTGAACGCCATGATGACGGATGCAGGTGGTGCCAATAGTCTTCTCGG
CGGCGTCTCCATTTCGCAGAGCTTCGGAGGCGACTTCTTCTTGCACTGGC
AGCTGCAGTGCCGCAACCGTCCGGATGCCCGGGATGCCTACGAATTTGTG
CCGGATAGCGACATTATACTCCAAGCCAGGGCGGACACCTGTCGTCTGCG
TTACAACGAGTCCACGATGCTGAAGCTCTACGGGATTGCCAGGCACATCG
AACCACCGGGTGCGGTCCTCTTTAGCACCGATGACTTGGAGGTGCAGCTG
AATCGCACACAACGACCGGCGGCAGCAGGAAAGAAATCCCCACTGAAGCA
TCCCAAGCTGCTCAAAAAACTGCTGGCCGGAAACAGGGAGCAACTGCTGC
GCCAGGTGGCCGCCGGATCGGAAATTGGCAATGAAAATGGTATAGGTAGT
GGGACGGAGCACCCCAACCGTCGCCTCAAGACACACCATCGACCCAATCC
GCTGATGGAGCAGCAATTGCAGGAACTTTTGCCTCAGGGAGCAGATAACG
AATCACCTAACTTCGGAATGGCAAGTGGTTACCCCAAGGAATTTAAGGAC
TACGATGCCCTACAACTGCCGCCAGAGAATGCTAATCCGCTGCGCCTGCC
GGAGGAGTACGAACTGGTGTACAACGACGAAGTGCCTCCGCTTTTAGAGC
CCAGTGAACGTGAGCGACCCATTCACCTGCGCTCCAAATATCCCAGCGCC
GGCAATCGGGATGTGCGCAGTGGATTCCTCGAAGCCAGTGGCAGCAGCAT
CATAACCACCAGCCCTGCCACCCCCAGCTCCACCGGACAACCCATGTCAG
CTCAGTCCCCGCTGAGCCTGTGGGATCTGGAGCTGGACAACGAGGCGCGG
GAGCGAGCTGCGGACGCCCAGGAGGAAAACAAAAAACAGAAGAAACGTCG
CAAAAGACGCGAGAGTGCTTCCGGAATCACGACAACAGCGTCCGAGGATT
CCGCTGGTGTTGAGGAGTCCTCCGTAGGAGCTGACTGGTACTTGGCTTCC
ATCTCATCCACCGGCGTTTTGCTGAAAGCTCTGGGCAATGTCAGCTCCTC
GCTGGACTTTGCCTTCGTCCTCAACATCCGAGAATCGGAGGCCTATCCGC
CACTCTTCTCTCCGCAGGATCTCAGCTGCGTCGAGGAGAAAGTCAGTGCG
TACAAGAGCTACACCATAGACAACTTACGCGTGCTGCGCAAACAGTTCCT
GAAGCAGTGCCTCAGCGAGCGTCTGGTGGACGCGGAGCCCACCCTACCCA
AGTTCGAGTCGCAGCTGGTGGTGACCCGCATCGGGATCACCTGCACCTGT
CGCTCCCTGCGGCCGGGCGAGGTTTGCTCGGAGCTGGATCCGGTGGAGTC
GCAGCGCTGGACGGAGTTTATGGGTAACTCGGGACATGGCTTCTATGCCA
ACCACTAAACTTAGCTAATCGCTAATCGCTGACCGCGGAGGATTCGGCGC
CGGAGGATTGGGTCCTTTTGGCCACCGCAGCCGGAACTACCCGCGCCAGC
CTATCTCTTTCTCTCAATGTCTCTGTCAACAGTCACTATTGTAATTTATC
GTCATTTGCGTGTTGTGGGGTTTCTTGTAATCGTAACAGTATTTACCTGC
GTGTATTTGTGTATATTTTACGAGTTCTTTTGACAAAAATAAAACTAATC
CAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP10313.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15477459..15478757 2244..946 6450 99.8 Minus
chr3R 27901430 chr3R 15478823..15479508 945..260 3385 99.6 Minus
chr3R 27901430 chr3R 15476784..15477397 2858..2245 3055 99.8 Minus
chr3R 27901430 chr3R 15476208..15476701 3351..2858 2470 100 Minus
chr3R 27901430 chr3R 15480035..15480295 261..1 1275 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19653625..19654923 2244..946 6495 100 Minus
3R 32079331 3R 19654989..19655674 945..260 3430 100 Minus
3R 32079331 3R 19652950..19653563 2858..2245 3070 100 Minus
3R 32079331 3R 19652373..19652867 3352..2858 2475 100 Minus
3R 32079331 3R 19656205..19656465 261..1 1305 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19394456..19395754 2244..946 6495 100 Minus
3R 31820162 3R 19395820..19396505 945..260 3430 100 Minus
3R 31820162 3R 19393781..19394394 2858..2245 3070 100 Minus
3R 31820162 3R 19393204..19393698 3352..2858 2475 100 Minus
3R 31820162 3R 19397036..19397296 261..1 1305 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:09:09 has no hits.

MIP10313.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:10:04 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15476208..15476701 2858..3351 100 <- Minus
chr3R 15476785..15477397 2245..2857 99 <- Minus
chr3R 15477459..15478757 946..2244 99 <- Minus
chr3R 15478823..15479506 262..945 99 <- Minus
chr3R 15480035..15480295 1..261 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-26 10:58:09 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RD 1..2970 139..3108 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:37:46 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 1..2970 139..3108 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:24:27 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RF 65..3090 84..3108 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-26 10:58:08 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 24..3374 1..3351 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:37:46 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 24..3374 1..3351 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:27 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 1..3351 1..3351 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:04 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19652374..19652867 2858..3351 100 <- Minus
3R 19652951..19653563 2245..2857 100 <- Minus
3R 19653625..19654923 946..2244 100 <- Minus
3R 19654989..19655672 262..945 100 <- Minus
3R 19656205..19656465 1..261 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:04 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19652374..19652867 2858..3351 100 <- Minus
3R 19652951..19653563 2245..2857 100 <- Minus
3R 19653625..19654923 946..2244 100 <- Minus
3R 19654989..19655672 262..945 100 <- Minus
3R 19656205..19656465 1..261 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:04 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19652374..19652867 2858..3351 100 <- Minus
3R 19652951..19653563 2245..2857 100 <- Minus
3R 19653625..19654923 946..2244 100 <- Minus
3R 19654989..19655672 262..945 100 <- Minus
3R 19656205..19656465 1..261 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:37:46 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15478096..15478589 2858..3351 100 <- Minus
arm_3R 15478673..15479285 2245..2857 100 <- Minus
arm_3R 15479347..15480645 946..2244 100 <- Minus
arm_3R 15480711..15481394 262..945 100 <- Minus
arm_3R 15481927..15482187 1..261 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:35:47 Download gff for MIP10313.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19393205..19393698 2858..3351 100 <- Minus
3R 19393782..19394394 2245..2857 100 <- Minus
3R 19394456..19395754 946..2244 100 <- Minus
3R 19395820..19396503 262..945 100 <- Minus
3R 19397036..19397296 1..261 100   Minus

MIP10313.hyp Sequence

Translation from 0 to 3107

> MIP10313.hyp
NWSCTKKQEPQDALRYPQPILRAAKSEAFLQAQLGGATATAESLPKMIKL
RPYVPSKRIAIRDSSIDEDASDDVEDEVFIKDARSAKRSEEQGLKRPLMA
PRRKHSPGSGPGSGSGSTPIMKQHRRRRCCRCCEPFCYALAALTVLCALL
SLAALMLTLFPLPLQRIRHWWRPDPAQLAAISAGSSRISYGSSLGSEFVP
CTQISVQKRWSRSLARMNSESPLRAADLNGDGIKDVVFGYGVDDNIPYEG
IPLPRCQCAQQGEEVPCEGGVVALNGLDGSILWQSWSVANVFSLHCSADV
DGDGGTDCVAAGRLGMIYAINGRTGSVIWSFRELEVETNSPIVMDLYTIN
VLRDLDGDSVPEVIAAHLEEREESKAGHIKLISGKTGKVIRSIPTPYREE
MFVPIQLITQADGTELLLIVTGGQNTPGGIYSLRLHSLMAHTSEKHFTPL
HRQQGSGLMVPAVLTDLNGDGISDVVVAAFNRSVLAFDGANYTMMWNYTF
PASECVSAIVPGLFNHDRVTDFMVKYNTGPGFPVYYYSQTTILDGRNGQP
LLNAMMTDAGGANSLLGGVSISQSFGGDFFLHWQLQCRNRPDARDAYEFV
PDSDIILQARADTCRLRYNESTMLKLYGIARHIEPPGAVLFSTDDLEVQL
NRTQRPAAAGKKSPLKHPKLLKKLLAGNREQLLRQVAAGSEIGNENGIGS
GTEHPNRRLKTHHRPNPLMEQQLQELLPQGADNESPNFGMASGYPKEFKD
YDALQLPPENANPLRLPEEYELVYNDEVPPLLEPSERERPIHLRSKYPSA
GNRDVRSGFLEASGSSIITTSPATPSSTGQPMSAQSPLSLWDLELDNEAR
ERAADAQEENKKQKKRRKRRESASGITTTASEDSAGVEESSVGADWYLAS
ISSTGVLLKALGNVSSSLDFAFVLNIRESEAYPPLFSPQDLSCVEEKVSA
YKSYTIDNLRVLRKQFLKQCLSERLVDAEPTLPKFESQLVVTRIGITCTC
RSLRPGEVCSELDPVESQRWTEFMGNSGHGFYANH*

MIP10313.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6184-PF 1029 CG6184-PF 23..1029 29..1035 5245 99.8 Plus
CG6184-PA 989 CG6184-PA 1..989 47..1035 5163 100 Plus
CG6184-PE 973 CG6184-PE 25..973 87..1035 4963 99.9 Plus

MIP10313.pep Sequence

Translation from 0 to 3107

> MIP10313.pep
NWSCTKKQEPQDALRYPQPILRAAKSEAFLQAQLGGATATAESLPKMIKL
RPYVPSKRIAIRDSSIDEDASDDVEDEVFIKDARSAKRSEEQGLKRPLMA
PRRKHSPGSGPGSGSGSTPIMKQHRRRRCCRCCEPFCYALAALTVLCALL
SLAALMLTLFPLPLQRIRHWWRPDPAQLAAISAGSSRISYGSSLGSEFVP
CTQISVQKRWSRSLARMNSESPLRAADLNGDGIKDVVFGYGVDDNIPYEG
IPLPRCQCAQQGEEVPCEGGVVALNGLDGSILWQSWSVANVFSLHCSADV
DGDGGTDCVAAGRLGMIYAINGRTGSVIWSFRELEVETNSPIVMDLYTIN
VLRDLDGDSVPEVIAAHLEEREESKAGHIKLISGKTGKVIRSIPTPYREE
MFVPIQLITQADGTELLLIVTGGQNTPGGIYSLRLHSLMAHTSEKHFTPL
HRQQGSGLMVPAVLTDLNGDGISDVVVAAFNRSVLAFDGANYTMMWNYTF
PASECVSAIVPGLFNHDRVTDFMVKYNTGPGFPVYYYSQTTILDGRNGQP
LLNAMMTDAGGANSLLGGVSISQSFGGDFFLHWQLQCRNRPDARDAYEFV
PDSDIILQARADTCRLRYNESTMLKLYGIARHIEPPGAVLFSTDDLEVQL
NRTQRPAAAGKKSPLKHPKLLKKLLAGNREQLLRQVAAGSEIGNENGIGS
GTEHPNRRLKTHHRPNPLMEQQLQELLPQGADNESPNFGMASGYPKEFKD
YDALQLPPENANPLRLPEEYELVYNDEVPPLLEPSERERPIHLRSKYPSA
GNRDVRSGFLEASGSSIITTSPATPSSTGQPMSAQSPLSLWDLELDNEAR
ERAADAQEENKKQKKRRKRRESASGITTTASEDSAGVEESSVGADWYLAS
ISSTGVLLKALGNVSSSLDFAFVLNIRESEAYPPLFSPQDLSCVEEKVSA
YKSYTIDNLRVLRKQFLKQCLSERLVDAEPTLPKFESQLVVTRIGITCTC
RSLRPGEVCSELDPVESQRWTEFMGNSGHGFYANH*

MIP10313.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17361-PA 980 GF17361-PA 1..980 47..1035 4244 86.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15875-PA 1033 GG15875-PA 23..1033 29..1035 4721 94.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23375-PA 1010 GH23375-PA 4..1010 26..1034 3815 76.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6184-PF 1029 CG6184-PF 23..1029 29..1035 5245 99.8 Plus
CG6184-PA 989 CG6184-PA 1..989 47..1035 5163 100 Plus
CG6184-PE 973 CG6184-PE 25..973 87..1035 4963 99.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10335-PA 1011 GI10335-PA 16..1011 39..1034 3743 75.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11953-PA 995 GL11953-PA 25..994 40..1034 3829 79.9 Plus
Dper\GL11954-PA 206 GL11954-PA 1..129 121..275 422 63.9 Plus
Dper\GL11954-PA 206 GL11954-PA 59..205 891..1034 410 58.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26144-PA 808 GA26144-PA 1..642 47..685 2908 88.7 Plus
Dpse\GA26144-PB 756 GA26144-PB 1..590 99..685 2721 88 Plus
Dpse\GA26144-PA 808 GA26144-PA 636..807 861..1034 701 77.6 Plus
Dpse\GA26144-PB 756 GA26144-PB 584..755 861..1034 701 77.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26897-PA 1028 GM26897-PA 23..1028 29..1035 5197 96.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20104-PA 1029 GD20104-PA 23..1029 29..1035 5284 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10189-PA 1008 GJ10189-PA 14..1008 31..1034 3611 75.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:06:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22816-PA 958 GK22816-PA 1..958 47..1035 3717 77.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:06:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25117-PA 1028 GE25117-PA 23..1028 29..1035 4780 95 Plus