Clone MIP10548 Report

Search the DGRC for MIP10548

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:104
Well:48
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG15597-RB
Protein status:MIP10548.pep: gold
Sequenced Size:712

Clone Sequence Records

MIP10548.complete Sequence

712 bp assembled on 2009-05-21

GenBank Submission: BT083467.1

> MIP10548.complete
ATTAGTTCTACTTGTGCCTCTCGAGCGTTCGCAGTCCGCAATGAAAGTAT
TCGTATGTCTTCTGGCTCTGACAGCCATCCTGGCAACCGCCAACGCCGGT
CTCCTCAGTCTGCTCAAGGGAGGCGGTGGTGGTGGTGGCGGTGGCTATGG
CGGCGGATACGGTGGTGGCTACGGCGGCGGCTACGGAGGTGGTGGGTATG
GAGGCGAGAGCACCGTGAAGGTCATTAAAGTGATAACCGATTCCGGAGCT
GGCGGTGGCTACCGCGGAGGATACGCAGGTGGCTATGGAGGTGGCTACGG
AGGTGGCTACGGAGGTGCCTACGGTGGTGGCTACGGAGGTGGCAGCACTG
TTAAAATTATTAAAGTGATCACCGATTCCGGATCCGGCTACGGAGGTGGA
TACGGTGGAGGTGGCTGGACCTCGGGCAGCTACGGGGGCAGTTACGCTGG
TGGCTACGGTGGTCAGTCCGGATGGTGGAAGACGAAGTGAGCAGATGAAC
CACTCTCCTTTTAGATGTAGTCCGGATATAAACTCGTTTATGTACCTGAA
AAAAAAACATTCCATAGCCAAGTAACCCGAATCTCTTTAATGCCAGTTAT
TTCCAAGTTAGCGAAACTAGTTTGAGATGATCCGCAGACTGCTTGGCGAA
CTCAAAAAAAAATAAATCTTAATTTAAATAAAAAAAAGAAAAAAAAAAAA
AAAAAAAAAAAA

MIP10548.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:30:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15597.a 1186 CG15597.a 345..1030 1..686 3415 99.8 Plus
CG15597-RB 1001 CG15597-RB 160..845 1..686 3415 99.8 Plus
CG14191-RA 974 CG14191-RA 391..552 160..315 310 81.4 Plus
CG14191-RA 974 CG14191-RA 491..556 278..343 210 87.8 Plus
CG14191-RA 974 CG14191-RA 487..544 286..343 185 87.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2110125..2110764 686..47 3185 99.8 Minus
chrX 22417052 chrX 18970927..18971105 160..332 270 79.3 Plus
chrX 22417052 chrX 18970927..18971104 160..343 265 78.6 Plus
chr3R 27901430 chr3R 2110822..2110870 49..1 245 100 Minus
chr3R 27901430 chr3R 2110429..2110533 247..140 190 80.6 Minus
chr3R 27901430 chr3R 2110564..2110671 382..278 190 80.6 Minus
chr3R 27901430 chr3R 2110470..2110533 317..254 185 85.9 Minus
chr3R 27901430 chr3R 2110494..2110557 341..278 185 85.9 Minus
chrX 22417052 chrX 18971047..18971136 250..339 180 80 Plus
chrX 22417052 chrX 18971027..18971092 278..343 180 84.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6284455..6285094 686..47 3185 99.8 Minus
X 23542271 X 19082029..19082190 160..315 290 81.5 Plus
3R 32079331 3R 6285152..6285200 49..1 245 100 Minus
X 23542271 X 19082129..19082194 278..343 210 87.9 Plus
3R 32079331 3R 6284759..6284863 247..140 190 80.6 Minus
3R 32079331 3R 6284894..6285001 382..278 190 80.6 Minus
3R 32079331 3R 6284800..6284863 317..254 185 85.9 Minus
3R 32079331 3R 6284824..6284887 341..278 185 85.9 Minus
X 23542271 X 19082125..19082182 286..343 185 87.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6025286..6025925 686..47 3185 99.8 Minus
X 23527363 X 19090127..19090288 160..315 310 81.4 Plus
3R 31820162 3R 6025983..6026031 49..1 245 100 Minus
X 23527363 X 19090227..19090292 278..343 210 87.8 Plus
X 23527363 X 19090223..19090280 286..343 185 87.9 Plus
Blast to na_te.dros performed on 2019-03-16 04:16:41 has no hits.

MIP10548.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:17:35 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2110161..2110464 347..650 100 == Minus
chr3R 2110561..2110615 196..250 100 == Minus
chr3R 2110693..2110764 47..118 100 <- Minus
chr3R 2110825..2110870 1..46 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:09:35 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RA 55..91 1..37 100 == Plus
CG15597-RA 92..516 65..490 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:46:23 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..450 41..490 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:24:18 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..450 41..490 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:34:06 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..450 41..490 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-21 09:50:21 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RA 55..91 1..37 100 == Plus
CG15597-RA 92..516 65..490 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:46:23 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..682 1..682 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:24:18 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..682 1..682 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:34:06 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
CG15597-RB 1..679 1..679 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:17:35 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6284452..6285094 47..688 99 <- Minus
3R 6285155..6285200 1..46 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:17:35 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6284452..6285094 47..688 99 <- Minus
3R 6285155..6285200 1..46 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:17:35 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6284452..6285094 47..688 99 <- Minus
3R 6285155..6285200 1..46 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:24:18 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2110174..2110816 47..688 99 <- Minus
arm_3R 2110877..2110922 1..46 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:21:43 Download gff for MIP10548.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6025283..6025925 47..688 99 <- Minus
3R 6025986..6026031 1..46 100   Minus

MIP10548.hyp Sequence

Translation from 0 to 489

> MIP10548.hyp
LVLLVPLERSQSAMKVFVCLLALTAILATANAGLLSLLKGGGGGGGGGYG
GGYGGGYGGGYGGGGYGGESTVKVIKVITDSGAGGGYRGGYAGGYGGGYG
GGYGGAYGGGYGGGSTVKIIKVITDSGSGYGGGYGGGGWTSGSYGGSYAG
GYGGQSGWWKTK*

MIP10548.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15597-PB 149 CG15597-PB 1..149 14..162 829 100 Plus
CG14191-PA 193 CG14191-PA 1..188 14..158 449 53.4 Plus
CG12523-PB 250 CG12523-PB 1..158 14..161 339 50.6 Plus
CG12523-PA 250 CG12523-PA 1..158 14..161 339 50.6 Plus
CG15731-PA 319 CG15731-PA 1..199 14..157 317 41.8 Plus

MIP10548.pep Sequence

Translation from 1 to 489

> MIP10548.pep
LVLLVPLERSQSAMKVFVCLLALTAILATANAGLLSLLKGGGGGGGGGYG
GGYGGGYGGGYGGGGYGGESTVKVIKVITDSGAGGGYRGGYAGGYGGGYG
GGYGGAYGGGYGGGSTVKIIKVITDSGSGYGGGYGGGGWTSGSYGGSYAG
GYGGQSGWWKTK*

MIP10548.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15597-PB 149 CG15597-PB 1..149 14..162 829 100 Plus
CG14191-PA 193 CG14191-PA 1..188 14..158 449 53.4 Plus
CG12523-PB 250 CG12523-PB 1..158 14..161 339 50.6 Plus
CG12523-PA 250 CG12523-PA 1..158 14..161 339 50.6 Plus
CG15731-PA 319 CG15731-PA 1..199 14..157 317 41.8 Plus
CG5070-PA 209 CG5070-PA 1..172 14..151 304 44.2 Plus
CG13376-PB 200 CG13376-PB 1..156 14..157 302 44.5 Plus
CG13376-PD 204 CG13376-PD 8..160 17..157 292 44.1 Plus
CG10598-PC 173 CG10598-PC 1..169 14..159 287 45.4 Plus
CG10598-PA 173 CG10598-PA 1..169 14..159 287 45.4 Plus
CG13376-PC 193 CG13376-PC 69..192 41..158 279 48.1 Plus
TwdlT-PA 286 CG5812-PA 1..127 14..153 279 44.3 Plus
CG13376-PB 200 CG13376-PB 79..199 40..158 278 50 Plus
CG13376-PD 204 CG13376-PD 83..203 40..158 278 50 Plus
CG13376-PC 193 CG13376-PC 15..149 43..157 276 46.7 Plus
CG5172-PD 172 CG5172-PD 8..138 16..160 276 45.5 Plus
CG10597-PB 200 CG10597-PB 1..133 14..158 258 46.9 Plus
CG17108-PA 342 CG17108-PA 199..323 28..157 248 42.4 Plus
CG32564-PA 409 CG32564-PA 1..161 14..156 247 41.4 Plus
CG9083-PB 317 CG9083-PB 129..300 30..156 246 38.4 Plus
CG17108-PA 342 CG17108-PA 223..338 40..154 245 48 Plus
CG9083-PB 317 CG9083-PB 143..317 40..160 243 36.6 Plus
CG17108-PA 342 CG17108-PA 166..296 40..158 242 45.2 Plus
Cpr47Ef-PD 601 CG13214-PD 248..361 40..154 242 47.8 Plus
Cpr47Ef-PC 612 CG13214-PC 248..361 40..154 242 47.8 Plus
Cpr47Ef-PD 601 CG13214-PD 276..411 40..157 236 43.2 Plus
Cpr47Ef-PC 612 CG13214-PC 276..411 40..157 236 43.2 Plus
Cpr47Ef-PD 601 CG13214-PD 338..475 40..157 235 45 Plus
Cpr47Ef-PC 612 CG13214-PC 338..477 40..157 235 44.4 Plus
Fib-PA 344 CG9888-PA 9..106 39..160 234 47.5 Plus
Ipod-PC 349 CG2961-PC 1..210 14..157 231 34.7 Plus
Ipod-PB 349 CG2961-PB 1..210 14..157 231 34.7 Plus
Ipod-PA 349 CG2961-PA 1..210 14..157 231 34.7 Plus
CG9083-PB 317 CG9083-PB 76..238 41..158 230 40.9 Plus
Cpr47Ef-PD 601 CG13214-PD 379..496 39..157 230 45.5 Plus
CG7294-PA 127 CG7294-PA 1..127 14..154 229 40.3 Plus
CG5172-PC 106 CG5172-PC 8..93 16..115 227 51.9 Plus
CG2962-PA 376 CG2962-PA 1..137 14..126 227 47.5 Plus
Cpr47Ef-PC 612 CG13214-PC 379..507 39..157 224 45.3 Plus
Cpr47Ef-PD 601 CG13214-PD 311..429 39..157 223 45.5 Plus
Cpr47Ef-PC 612 CG13214-PC 311..429 39..157 223 45.5 Plus
CG5070-PA 209 CG5070-PA 21..109 68..154 220 51.6 Plus
Cpr47Ef-PD 601 CG13214-PD 332..447 40..157 219 45 Plus
Cpr47Ef-PC 612 CG13214-PC 332..447 40..157 219 45 Plus
CG7406-PA 168 CG7406-PA 1..161 14..159 219 35 Plus
CG14327-PB 153 CG14327-PB 40..150 17..138 217 43.1 Plus
CG14327-PA 153 CG14327-PA 40..150 17..138 217 43.1 Plus
Edg91-PA 159 CG7539-PA 8..148 19..154 216 42.5 Plus
CG17108-PA 342 CG17108-PA 1..193 14..157 215 35.7 Plus
CG17108-PA 342 CG17108-PA 95..212 30..154 214 41.4 Plus
Cpr47Ef-PD 601 CG13214-PD 382..529 40..157 214 44.3 Plus
Hrb87F-PE 385 CG12749-PE 199..313 39..154 213 45.3 Plus
Hrb87F-PD 385 CG12749-PD 199..313 39..154 213 45.3 Plus
Hrb87F-PC 385 CG12749-PC 199..313 39..154 213 45.3 Plus
Hrb87F-PA 385 CG12749-PA 199..313 39..154 213 45.3 Plus
CG9083-PB 317 CG9083-PB 38..234 40..157 211 35.2 Plus
Cpr47Ef-PC 612 CG13214-PC 413..540 40..157 210 44.2 Plus
CG5172-PD 172 CG5172-PD 88..172 39..134 209 46.9 Plus
Cpr47Ef-PD 601 CG13214-PD 235..346 46..157 208 48.4 Plus
Cpr47Ef-PC 612 CG13214-PC 235..346 46..157 208 48.4 Plus
Edg91-PB 151 CG7539-PB 23..140 35..154 208 45.3 Plus
Hrb87F-PE 385 CG12749-PE 242..376 41..157 208 39.7 Plus
Hrb87F-PD 385 CG12749-PD 242..376 41..157 208 39.7 Plus
Hrb87F-PC 385 CG12749-PC 242..376 41..157 208 39.7 Plus
Hrb87F-PA 385 CG12749-PA 242..376 41..157 208 39.7 Plus
caz-PD 355 CG3606-PD 168..313 39..157 204 37.5 Plus
caz-PC 384 CG3606-PC 197..342 39..157 204 37.5 Plus
caz-PB 399 CG3606-PB 212..357 39..157 204 37.5 Plus
CG2150-PA 188 CG2150-PA 29..185 41..153 203 35.7 Plus
CG13376-PB 200 CG13376-PB 15..95 78..158 202 53.6 Plus
CG13376-PD 204 CG13376-PD 19..99 78..158 202 53.6 Plus
CG13376-PC 193 CG13376-PC 8..88 78..158 202 53.6 Plus
CG10597-PB 200 CG10597-PB 84..198 42..159 202 42.3 Plus
CG14327-PB 153 CG14327-PB 52..130 52..158 202 44.9 Plus
CG14327-PA 153 CG14327-PA 52..130 52..158 202 44.9 Plus
CG11458-PA 98 CG11458-PA 4..98 25..139 202 43.5 Plus
CG7296-PB 161 CG7296-PB 1..157 14..151 201 38.4 Plus
CG7296-PA 161 CG7296-PA 1..157 14..151 201 38.4 Plus
sqd-PD 178 CG16901-PD 62..172 39..155 199 45.9 Plus
sqd-PB 344 CG16901-PB 228..338 39..155 199 45.9 Plus
Edg91-PB 151 CG7539-PB 51..150 41..146 198 45.8 Plus
TwdlT-PA 286 CG5812-PA 27..91 82..157 196 51.3 Plus
CG15731-PA 319 CG15731-PA 126..264 40..139 195 38.8 Plus
sqd-PD 178 CG16901-PD 55..150 43..157 194 42.6 Plus
sqd-PB 344 CG16901-PB 221..316 43..157 194 42.6 Plus
Cpr47Ef-PD 601 CG13214-PD 447..540 40..146 193 46 Plus
Edg91-PB 151 CG7539-PB 43..146 40..147 193 46.3 Plus
CG9757-PB 127 CG9757-PB 1..127 14..154 193 36.6 Plus
CG9757-PA 127 CG9757-PA 1..127 14..154 193 36.6 Plus
CG14326-PA 137 CG14326-PA 46..137 26..112 192 45 Plus
CG5070-PA 209 CG5070-PA 79..207 35..146 188 40.3 Plus
Cpr47Ef-PC 612 CG13214-PC 443..551 41..146 187 43.4 Plus
CG5172-PC 106 CG5172-PC 17..88 78..160 184 51.7 Plus
Fib-PA 344 CG9888-PA 27..113 40..119 184 51.1 Plus
CG8157-PB 113 CG8157-PB 1..111 14..153 184 40.6 Plus
CG8157-PA 113 CG8157-PA 1..111 14..153 184 40.6 Plus
CG14326-PA 137 CG14326-PA 44..134 31..113 183 44.6 Plus
CG5778-PC 117 CG5778-PC 15..112 21..140 182 42.9 Plus
CG5778-PA 117 CG5778-PA 15..112 21..140 182 42.9 Plus
CG14326-PA 137 CG14326-PA 46..137 34..135 180 45.2 Plus
Cpr47Ef-PD 601 CG13214-PD 30..114 36..138 179 43.8 Plus
Cpr47Ef-PC 612 CG13214-PC 30..114 36..138 179 43.8 Plus
Cpr47Ef-PD 601 CG13214-PD 46..115 40..115 174 51.8 Plus
Cpr47Ef-PC 612 CG13214-PC 46..115 40..115 174 51.8 Plus
Hrb87F-PE 385 CG12749-PE 272..381 40..137 168 38.7 Plus
Hrb87F-PD 385 CG12749-PD 272..381 40..137 168 38.7 Plus
Hrb87F-PC 385 CG12749-PC 272..381 40..137 168 38.7 Plus
Hrb87F-PA 385 CG12749-PA 272..381 40..137 168 38.7 Plus
CG7294-PA 127 CG7294-PA 26..93 82..156 165 48.7 Plus
Hrb87F-PE 385 CG12749-PE 285..380 40..154 165 36.4 Plus
Hrb87F-PD 385 CG12749-PD 285..380 40..154 165 36.4 Plus
Hrb87F-PC 385 CG12749-PC 285..380 40..154 165 36.4 Plus
Hrb87F-PA 385 CG12749-PA 285..380 40..154 165 36.4 Plus
CG13376-PC 193 CG13376-PC 111..191 34..108 164 48.8 Plus
CG17108-PA 342 CG17108-PA 268..342 39..113 164 48.8 Plus
Cpr47Ef-PD 601 CG13214-PD 40..113 32..114 163 50.6 Plus
Cpr47Ef-PC 612 CG13214-PC 40..113 32..114 163 50.6 Plus
Cpr47Ef-PC 612 CG13214-PC 468..600 40..157 157 39.8 Plus
CG5778-PC 117 CG5778-PC 25..106 45..152 156 43.5 Plus
CG5778-PA 117 CG5778-PA 25..106 45..152 156 43.5 Plus
CG13376-PB 200 CG13376-PB 121..199 34..103 153 51.9 Plus
CG13376-PD 204 CG13376-PD 125..203 34..103 153 51.9 Plus
CG13376-PC 193 CG13376-PC 114..192 34..103 153 51.9 Plus
CG7294-PA 127 CG7294-PA 11..76 72..157 152 42 Plus
Cpr47Ef-PD 601 CG13214-PD 35..113 46..157 152 37.7 Plus
Cpr47Ef-PD 601 CG13214-PD 448..589 40..157 152 39.4 Plus
Cpr47Ef-PC 612 CG13214-PC 35..113 46..157 152 37.7 Plus
caz-PD 355 CG3606-PD 266..336 42..138 151 43.3 Plus
caz-PC 384 CG3606-PC 295..365 42..138 151 43.3 Plus
caz-PB 399 CG3606-PB 310..380 42..138 151 43.3 Plus
CG9083-PB 317 CG9083-PB 18..119 61..152 150 37.3 Plus
CG2150-PA 188 CG2150-PA 23..121 52..156 149 36.3 Plus
caz-PD 355 CG3606-PD 269..342 40..110 147 47.6 Plus
caz-PC 384 CG3606-PC 4..97 51..151 147 37.6 Plus
caz-PC 384 CG3606-PC 298..371 40..110 147 47.6 Plus
caz-PB 399 CG3606-PB 313..386 40..110 147 47.6 Plus
CG2150-PA 188 CG2150-PA 23..118 48..157 143 37.2 Plus
CG9757-PB 127 CG9757-PB 50..112 84..157 142 46.2 Plus
CG9757-PA 127 CG9757-PA 50..112 84..157 142 46.2 Plus