Clone MIP10846 Report

Search the DGRC for MIP10846

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:107
Well:46
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG10163-RA
Protein status:MIP10846.pep: gold
Sequenced Size:1241

Clone Sequence Records

MIP10846.complete Sequence

1241 bp assembled on 2011-07-29

GenBank Submission: BT128784.1

> MIP10846.complete
ATGAGAGCACAATTCACCATGCAGAAGAGCACAGCCCAGATGATCATCGC
AGTCTGCCTGATCTGTCAATCTTTGGCAGTGGAGGATAAGGATAAGGCAA
CAAATCCATTAAATATAGATAGTGTCCAAAAACATAATGTCAAGCTACTC
AGCGAGCAACTGAATCGCGGTTGGCGAGCATTCTGCGATGCTCCTGTGGA
TGAGGGTGTGATGTCCTTATTTCAGGGCATTAATCCCAGCGATGCCCGAC
TCCATGTGATGACCATCACCAACCAGAGTGTAGAGCTGCCCATTAAATCC
ATATCTCAGATCAAGGATTTCGATATCAATCCGGAGCGTAAGACCCTCAT
CTATGTGAATGCCTTCCACACGGCCGATAGCTATTTTAGTGTGCAGGAGC
ACTTGACTCTGCTGCAAAACAGCAGGAGGGATCTCAATGTAATTGTGGTG
GATTTCGCAAAGGATGTGGCTCAATTGTACTATGCAGTGCGTCATCATCT
CTCCGTTAATGGCTACTTCGTTTATAAGCTGCTGAGAGCTCTGAAGGATG
CGGGCATTGCCGTGCAGGATATCACTTTGGCAGGACACTCAGTGGGTGCT
AACATAGCCGCACTGGGTGCCCAACTTTTTGCCAAAGAAAACAAACAATT
GGTGGGCCAACTGTTGGCCATAGACCCAGCCACCATGTGTCGCACCACCG
ATATTTTGGTAAAACAAAGTGTGGCTTTAAGAGTGGTGGTGCTGCACGGG
GAGGGAGATGTTTTTGGGGTGAGGGTGCCACTGGGTCACATCGATATCTA
TCCCAATGGTATTGGATACTTCCCGAGGAGGAAACTGCAACCTGGCTGCG
AGTCCAAGATCTGCAGTCACATGTATCCATTTATTCTGTTCATGGAGGCT
CTCATCGAGGGTGTGATGATCCCAGCTACCAAGTGCGAGAGTTGGGCCAA
GTTCCGACAGGGCGATTGTAATTTCCAGAACACCATCAACATTGGACTCA
TCTACCCAGCGAATGCCAAGGGTCTGTACTTCTGCATGACGCAACCGAAT
CCTCCATTCACCTATATGGAACATGGACTGCGCTACAAGGCGAGACGTCC
TGAGAAATCCTCTGAAAAGAACCGTATAAAGTTTTAGTTTTAGCTATTAG
AATTGTAAATGTTTTTTAGTTCAATAGGTAATTTATTTATTTATTAAAGT
ATGTTCTTGTAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP10846.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:59:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6250293..6251006 898..185 3570 100 Minus
chr3L 24539361 chr3L 6249922..6250238 1213..896 1510 99.1 Minus
chr3L 24539361 chr3L 6251067..6251251 185..1 925 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6257802..6258515 898..185 3570 100 Minus
3L 28110227 3L 6257430..6257747 1213..896 1590 100 Minus
3L 28110227 3L 6258576..6258760 185..1 925 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6250902..6251615 898..185 3570 100 Minus
3L 28103327 3L 6250530..6250847 1213..896 1590 100 Minus
3L 28103327 3L 6251676..6251860 185..1 925 100 Minus
Blast to na_te.dros performed 2019-03-15 10:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 941..1009 1196..1126 117 67.1 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 891..965 1196..1125 116 64 Minus

MIP10846.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:00:54 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6249920..6250236 898..1215 98 <- Minus
chr3L 6250294..6251006 185..897 100 <- Minus
chr3L 6251068..6251251 1..184 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-07-29 10:47:18 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1137 1..1137 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:32:12 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1137 1..1137 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:18:26 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1137 1..1137 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-29 10:47:17 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1213 1..1215 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:32:12 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1213 1..1215 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:26 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
CG10163-RA 1..1213 1..1215 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:54 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6257428..6257745 898..1215 99 <- Minus
3L 6257803..6258515 185..897 100 <- Minus
3L 6258577..6258760 1..184 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:54 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6257428..6257745 898..1215 99 <- Minus
3L 6257803..6258515 185..897 100 <- Minus
3L 6258577..6258760 1..184 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:54 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6257428..6257745 898..1215 99 <- Minus
3L 6257803..6258515 185..897 100 <- Minus
3L 6258577..6258760 1..184 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:32:12 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6250528..6250845 898..1215 99 <- Minus
arm_3L 6250903..6251615 185..897 100 <- Minus
arm_3L 6251677..6251860 1..184 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:59:00 Download gff for MIP10846.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6251677..6251860 1..184 100   Minus
3L 6250528..6250845 898..1215 99 <- Minus
3L 6250903..6251615 185..897 100 <- Minus

MIP10846.pep Sequence

Translation from 0 to 1136

> MIP10846.pep
MRAQFTMQKSTAQMIIAVCLICQSLAVEDKDKATNPLNIDSVQKHNVKLL
SEQLNRGWRAFCDAPVDEGVMSLFQGINPSDARLHVMTITNQSVELPIKS
ISQIKDFDINPERKTLIYVNAFHTADSYFSVQEHLTLLQNSRRDLNVIVV
DFAKDVAQLYYAVRHHLSVNGYFVYKLLRALKDAGIAVQDITLAGHSVGA
NIAALGAQLFAKENKQLVGQLLAIDPATMCRTTDILVKQSVALRVVVLHG
EGDVFGVRVPLGHIDIYPNGIGYFPRRKLQPGCESKICSHMYPFILFMEA
LIEGVMIPATKCESWAKFRQGDCNFQNTINIGLIYPANAKGLYFCMTQPN
PPFTYMEHGLRYKARRPEKSSEKNRIKF*

MIP10846.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10903-PA 369 GF10903-PA 1..366 7..373 1754 87.5 Plus
Dana\GF10332-PA 333 GF10332-PA 35..312 77..353 235 26.8 Plus
Dana\GF22327-PA 420 GF22327-PA 133..376 108..353 232 27.1 Plus
Dana\GF22964-PA 584 GF22964-PA 70..343 83..357 197 26 Plus
Dana\GF17270-PA 419 GF17270-PA 142..398 109..353 172 27.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14062-PA 380 GG14062-PA 1..380 1..378 1945 94.5 Plus
Dere\GG16105-PA 376 GG16105-PA 79..356 77..353 234 27.7 Plus
Dere\GG20643-PA 394 GG20643-PA 112..292 142..313 210 29.9 Plus
Dere\GG19106-PA 411 GG19106-PA 130..360 112..344 202 27.7 Plus
Dere\GG18955-PA 417 GG18955-PA 89..345 109..353 168 24.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16280-PA 371 GH16280-PA 34..367 38..371 1589 84.4 Plus
Dgri\GH12060-PA 391 GH12060-PA 131..381 107..361 250 30 Plus
Dgri\GH14732-PA 333 GH14732-PA 100..310 142..353 201 27.5 Plus
Dgri\GH18611-PA 495 GH18611-PA 204..493 76..357 175 25.1 Plus
Dgri\GH11279-PA 387 GH11279-PA 179..384 144..354 164 26.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG10163-PA 378 CG10163-PA 1..378 1..378 1966 100 Plus
CG5665-PB 376 CG5665-PB 79..356 77..353 211 25.7 Plus
CG5162-PB 411 CG5162-PB 127..369 107..353 211 28.6 Plus
CG5162-PA 411 CG5162-PA 127..369 107..353 211 28.6 Plus
CG6472-PB 389 CG6472-PB 107..287 142..313 190 30.5 Plus
CG1986-PB 404 CG1986-PB 89..345 109..353 170 23.8 Plus
CG1986-PA 404 CG1986-PA 89..345 109..353 170 23.8 Plus
CG4582-PA 432 CG4582-PA 197..432 146..372 165 24 Plus
CG7367-PD 358 CG7367-PD 105..348 110..353 159 26.7 Plus
CG7367-PB 358 CG7367-PB 105..348 110..353 159 26.7 Plus
CG7367-PC 389 CG7367-PC 136..379 110..353 159 26.7 Plus
CG18258-PA 468 CG18258-PA 152..447 62..353 154 23.9 Plus
CG17292-PD 340 CG17292-PD 48..317 102..362 152 23.1 Plus
CG17292-PC 340 CG17292-PC 48..317 102..362 152 23.1 Plus
CG17292-PB 340 CG17292-PB 48..317 102..362 152 23.1 Plus
CG17292-PA 340 CG17292-PA 48..317 102..362 152 23.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13223-PA 365 GI13223-PA 1..364 7..374 1607 78.1 Plus
Dmoj\GI15548-PA 389 GI15548-PA 115..377 96..361 222 26.8 Plus
Dmoj\GI10359-PA 394 GI10359-PA 106..388 76..353 220 26.9 Plus
Dmoj\GI21161-PA 396 GI21161-PA 107..327 142..353 196 28.4 Plus
Dmoj\GI13385-PA 239 GI13385-PA 11..217 145..353 191 28.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22520-PA 160 GL22520-PA 1..152 229..375 732 84.9 Plus
Dper\GL15338-PA 138 GL15338-PA 1..123 1..118 428 63.4 Plus
Dper\GL20570-PA 95 GL20570-PA 1..74 87..159 266 72.7 Plus
Dper\GL25135-PA 359 GL25135-PA 50..339 72..353 235 27.9 Plus
Dper\GL19879-PA 419 GL19879-PA 135..384 102..353 221 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10123-PA 395 GA10123-PA 32..387 23..375 1657 83.2 Plus
Dpse\GA19044-PA 359 GA19044-PA 60..339 77..353 225 27.5 Plus
Dpse\GA18700-PA 419 GA18700-PA 135..384 102..353 221 27.6 Plus
Dpse\GA19771-PA 380 GA19771-PA 169..376 142..354 165 25.7 Plus
Dpse\GA10083-PA 288 GA10083-PA 69..278 130..353 164 28.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13844-PA 368 GM13844-PA 1..368 7..378 1936 96.8 Plus
Dsec\GM22281-PA 376 GM22281-PA 79..356 77..353 218 25.7 Plus
Dsec\GM21737-PA 394 GM21737-PA 112..292 142..313 213 30.5 Plus
Dsec\GM13497-PA 433 GM13497-PA 127..316 107..301 174 27.8 Plus
Dsec\GM16918-PA 340 GM16918-PA 48..317 102..362 164 22.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13129-PA 150 GD13129-PA 1..150 229..378 807 96.7 Plus
Dsim\GD13130-PA 69 GD13130-PA 1..68 1..68 357 97.1 Plus
Dsim\GD14879-PA 376 GD14879-PA 79..356 77..353 219 25.7 Plus
Dsim\GD11231-PA 394 GD11231-PA 112..292 142..313 213 30.5 Plus
Dsim\GD17338-PA 249 GD17338-PA 7..240 107..344 207 28.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11998-PA 373 GJ11998-PA 36..369 38..371 1605 85 Plus
Dvir\GJ14891-PA 392 GJ14891-PA 129..379 109..361 235 27.5 Plus
Dvir\GJ21013-PA 371 GJ21013-PA 107..327 142..353 207 28.8 Plus
Dvir\GJ11510-PA 385 GJ11510-PA 146..356 142..353 200 27.6 Plus
Dvir\GJ11509-PA 289 GJ11509-PA 27..265 113..353 193 27.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17341-PA 362 GK17341-PA 24..362 38..376 1586 82.6 Plus
Dwil\GK25805-PA 392 GK25805-PA 127..373 105..355 233 27.9 Plus
Dwil\GK16955-PA 292 GK16955-PA 56..268 142..353 228 29.5 Plus
Dwil\GK19961-PA 318 GK19961-PA 44..314 90..353 188 27.6 Plus
Dwil\GK22029-PA 364 GK22029-PA 49..313 101..353 187 25.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20487-PA 378 GE20487-PA 1..378 1..378 1976 95.8 Plus
Dyak\GE17652-PA 412 GE17652-PA 130..371 110..353 225 28.1 Plus
Dyak\GE19670-PA 376 GE19670-PA 79..356 77..353 223 25.7 Plus
Dyak\GE11832-PA 400 GE11832-PA 112..292 142..313 214 30.5 Plus
Dyak\GE12969-PA 392 GE12969-PA 183..387 144..353 167 27.9 Plus

MIP10846.hyp Sequence

Translation from 1 to 1136

> MIP10846.hyp
MRAQFTMQKSTAQMIIAVCLICQSLAVEDKDKATNPLNIDSVQKHNVKLL
SEQLNRGWRAFCDAPVDEGVMSLFQGINPSDARLHVMTITNQSVELPIKS
ISQIKDFDINPERKTLIYVNAFHTADSYFSVQEHLTLLQNSRRDLNVIVV
DFAKDVAQLYYAVRHHLSVNGYFVYKLLRALKDAGIAVQDITLAGHSVGA
NIAALGAQLFAKENKQLVGQLLAIDPATMCRTTDILVKQSVALRVVVLHG
EGDVFGVRVPLGHIDIYPNGIGYFPRRKLQPGCESKICSHMYPFILFMEA
LIEGVMIPATKCESWAKFRQGDCNFQNTINIGLIYPANAKGLYFCMTQPN
PPFTYMEHGLRYKARRPEKSSEKNRIKF*

MIP10846.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG10163-PA 378 CG10163-PA 1..378 1..378 1966 100 Plus
CG5665-PB 376 CG5665-PB 79..356 77..353 211 25.7 Plus
CG5162-PB 411 CG5162-PB 127..369 107..353 211 28.6 Plus
CG5162-PA 411 CG5162-PA 127..369 107..353 211 28.6 Plus
CG1986-PB 404 CG1986-PB 89..345 109..353 170 23.8 Plus