Clone MIP10861 Report

Search the DGRC for MIP10861

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:107
Well:61
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG34435-RA
Protein status:MIP10861.pep: gold
Sequenced Size:1110

Clone Sequence Records

MIP10861.complete Sequence

1110 bp assembled on 2009-06-12

GenBank Submission: BT088817.1

> MIP10861.complete
GACTTTCACGTTCTCCAGATCTCAAGCAGCTGAAATTCTCATTTCGGATT
CCCATTTCGGAATCATCGTACAATGCTCCAGAATTTCGCGTTTGAGAATC
ACCCCACAATCGGATTCTTTTCCAAGCAATCGGAGCTAATGAGAATGCTG
CCCGAGATTCCCAAGCTGCGCAACATCTTCGATCTGTTCGTGGTCAATGA
ATGTGACCAGGCGGCTGGCGGAGAAGATGTGGCGGCCCCAACATGCTTGG
ATCTTGGCATCGGGATACGGATGACGGATGTGGCGGACTGCCTGCGCATC
ATGGGCCTGAATCCCAGTGACGACGAGCTGCAGCAGCGACTGGAGGAGCA
TGTGCGTCGACGCGAGTCGTTGGGCATGGGAATGAAGAAGATCGCACAGC
GCGCCACCTTTGAGCTGGTGCTCACGCTGTACTGCCAGCTGGCGGAGCAG
GAGGTGAAGGAGATGGCCAAGGGATGCATCGTCGAGAATGTGCTGCGCGT
GTTGCGTAGCCGCGATTCCGCGGGCACTGGCATGTTGCCCTACAGTCAGC
TGCGCCATTTGCTGACCACCATGGGCAATCGATTGGACGAGACGGAGGTT
TACGGCGTGCTCCATCGCGCTGCGGACATTAATGGCAATGTCCTTTACGA
GCACCTAGTACACCAGCTGTTCGCCACGGATCCGCTGGCCGAGGAGCGGC
TGCAACAGGCGCAGCTTTACCTGCAGGCCGTCGGACGCAATGCCATCGAC
ATGGACATGGATAAGCGGGACGAGTTCATCGATGCCATCCGGCGGGCGGA
TCCCGCGCGCTCCGGTTTCATTGAGCCGCAGCGCCTGCTCGAGCTGCTCA
ATCGCAATGGGGAGCAGTTCACCGGCGAGGAGCTGCAGCTGCTCATCCAG
GGAATGGAGGATACACGGTGCAAGCGGGGCATCAACTATTGTCGCTTCCT
GGAGTTCATTATGAACGAGTAGTGGCTCCAGTGGTGAGATCCCTTCCAAT
GAATTCGCCATCGCTTATTAAATTTACTGTGAAATCTTGCATTTAAATTA
CTTTAAATAAAACGGTGTTTTTTTCGAGCGACAGAAAAAAAAAAAAAAAA
AAAAAAAAAA

MIP10861.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34435-RA 1092 CG34435-RA 9..1092 1..1084 5390 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:23:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5505735..5506583 1083..235 4125 99.1 Minus
chrX 22417052 chrX 5506642..5506876 235..1 1145 99.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5613324..5614174 1085..235 4225 99.8 Minus
X 23542271 X 5614233..5614467 235..1 1175 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5621422..5622272 1085..235 4225 99.7 Minus
X 23527363 X 5622331..5622565 235..1 1175 100 Minus
Blast to na_te.dros performed on 2019-03-16 18:23:42 has no hits.

MIP10861.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:24:36 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5505734..5506582 236..1084 98 <- Minus
chrX 5506642..5506876 1..235 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:27 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:46 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:11 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:39:04 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-12 09:40:23 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:45 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 73..972 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:11 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..1084 1..1084 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:39:04 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..1084 1..1084 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:36 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
X 5613325..5614173 236..1084 99 <- Minus
X 5614233..5614467 1..235 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:36 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
X 5613325..5614173 236..1084 99 <- Minus
X 5614233..5614467 1..235 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:36 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
X 5613325..5614173 236..1084 99 <- Minus
X 5614233..5614467 1..235 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:11 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5507358..5508206 236..1084 99 <- Minus
arm_X 5508266..5508500 1..235 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:15 Download gff for MIP10861.complete
Subject Subject Range Query Range Percent Splice Strand
X 5622331..5622565 1..235 100   Minus
X 5621423..5622271 236..1084 99 <- Minus

MIP10861.pep Sequence

Translation from 72 to 971

> MIP10861.pep
MLQNFAFENHPTIGFFSKQSELMRMLPEIPKLRNIFDLFVVNECDQAAGG
EDVAAPTCLDLGIGIRMTDVADCLRIMGLNPSDDELQQRLEEHVRRRESL
GMGMKKIAQRATFELVLTLYCQLAEQEVKEMAKGCIVENVLRVLRSRDSA
GTGMLPYSQLRHLLTTMGNRLDETEVYGVLHRAADINGNVLYEHLVHQLF
ATDPLAEERLQQAQLYLQAVGRNAIDMDMDKRDEFIDAIRRADPARSGFI
EPQRLLELLNRNGEQFTGEELQLLIQGMEDTRCKRGINYCRFLEFIMNE*

MIP10861.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:57:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21289-PA 410 GF21289-PA 128..410 14..299 757 54.7 Plus
Dana\GF21286-PA 147 GF21286-PA 27..141 65..196 159 28.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18492-PA 301 GG18492-PA 1..301 1..299 1026 69 Plus
Dere\GG18489-PA 147 GG18489-PA 27..141 65..196 159 28.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24922-PA 158 GH24922-PA 38..152 65..196 154 28.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG34435-PA 299 CG34435-PA 1..299 1..299 1538 100 Plus
Mlc-c-PA 147 CG3201-PA 27..146 65..201 159 27.7 Plus
Mlc-c-PB 153 CG3201-PB 33..152 65..201 159 27.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:57:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21778-PA 363 GI21778-PA 107..362 14..298 353 33.3 Plus
Dmoj\GI21775-PA 153 GI21775-PA 33..147 65..196 157 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:57:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16473-PA 375 GL16473-PA 122..374 11..298 571 44.6 Plus
Dper\GL16470-PA 153 GL16470-PA 33..147 65..196 156 28.8 Plus
Dper\GL19406-PA 161 GL19406-PA 33..161 65..201 155 34.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13953-PA 272 GA13953-PA 19..271 11..298 571 44.6 Plus
Dpse\GA14407-PA 161 GA14407-PA 33..161 65..201 159 35.7 Plus
Dpse\GA22593-PA 153 GA22593-PA 33..147 65..196 156 28.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12641-PA 293 GM12641-PA 1..293 7..299 1362 87.7 Plus
Dsec\GM12637-PA 147 GM12637-PA 27..141 65..196 159 28.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16253-PA 147 GD16253-PA 27..141 65..196 159 28.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16950-PA 271 GJ16950-PA 14..271 13..299 475 39.7 Plus
Dvir\GJ16948-PA 146 GJ16948-PA 26..140 65..196 159 28.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10180-PA 287 GK10180-PA 18..287 12..299 628 49.7 Plus
Dwil\GK24961-PA 619 GK24961-PA 499..618 65..201 165 28.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16809-PA 385 GE16809-PA 102..385 14..299 1105 76 Plus
Dyak\GE16807-PA 147 GE16807-PA 27..141 65..196 159 28.8 Plus

MIP10861.hyp Sequence

Translation from 72 to 971

> MIP10861.hyp
MLQNFAFENHPTIGFFSKQSELMRMLPEIPKLRNIFDLFVVNECDQAAGG
EDVAAPTCLDLGIGIRMTDVADCLRIMGLNPSDDELQQRLEEHVRRRESL
GMGMKKIAQRATFELVLTLYCQLAEQEVKEMAKGCIVENVLRVLRSRDSA
GTGMLPYSQLRHLLTTMGNRLDETEVYGVLHRAADINGNVLYEHLVHQLF
ATDPLAEERLQQAQLYLQAVGRNAIDMDMDKRDEFIDAIRRADPARSGFI
EPQRLLELLNRNGEQFTGEELQLLIQGMEDTRCKRGINYCRFLEFIMNE*

MIP10861.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:04:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34435-PA 299 CG34435-PA 1..299 1..299 1538 100 Plus
Mlc-c-PA 147 CG3201-PA 27..146 65..201 159 27.7 Plus
Mlc-c-PB 153 CG3201-PB 33..152 65..201 159 27.7 Plus