MIP10950.complete Sequence
548 bp assembled on 2009-10-08
GenBank Submission: BT099982.1
> MIP10950.complete
AGTCGTTTGAAAGGTGAGCAATGGAGACGAAGTTCGTGGTCATAACTTTT
CTAATAAGCTACGTACTTGCCCAATCGAATGCCGATTGTGGCAATAAGCC
AATTGTGGATGGAAATTGCGATCAGATAATCAAAGGATTTACTTTTGCAA
CCGAAGAAAACCGATGCAAAAAGTTTAGAGCAAAGGGTTGCACAGTGGGC
GGAAATTACTTTCGAGCCAAAGATGAGTGCGAGCTCAAATGCAAGGGTTA
TATAAATTGGGGTATCGAAAGCTTCGGAAACGGAGATTGGGAAGAAAGTG
AAATTGAGGACTATTGGAATAATGGTTCGGAAGAAAGCGAAGTCGAAAGC
ATCTCGAATAGAGGATCGAAAAAACGAACTCTCTAAAAGAAGCTTGAACT
GAGATAACATCGATGAATACTTGACAGCGGGGATTCAGTTTATTAAAATG
GTAAATGGTAACATTAAAAATTTTATTTGGCTACACTGTAAGCTACCTAA
TAAATTATACAGTTTTCTATACAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP10950.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:53:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-RA | 563 | Sfp24Ba-RA | 25..550 | 1..526 | 2615 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:59:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 3667483..3667923 | 521..81 | 2205 | 100 | Minus |
chr2L | 23010047 | chr2L | 3667976..3668056 | 81..1 | 405 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:59:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3667973..3668418 | 526..81 | 2215 | 99.8 | Minus |
2L | 23513712 | 2L | 3668471..3668551 | 81..1 | 405 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3667973..3668418 | 526..81 | 2215 | 99.7 | Minus |
2L | 23513712 | 2L | 3668471..3668551 | 81..1 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 00:59:23 has no hits.
MIP10950.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:00:19 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 3667482..3667922 | 82..522 | 99 | <- | Minus |
chr2L | 3667976..3668056 | 1..81 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:05 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..366 | 21..386 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:46 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..366 | 21..386 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:38:29 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..366 | 21..386 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:18:49 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..366 | 21..386 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-08 16:59:36 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..483 | 1..483 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:46 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..521 | 1..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:38:29 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..521 | 1..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:18:49 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 1..521 | 1..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:19 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3667977..3668417 | 82..522 | 99 | <- | Minus |
2L | 3668471..3668551 | 1..81 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:19 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3667977..3668417 | 82..522 | 99 | <- | Minus |
2L | 3668471..3668551 | 1..81 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:19 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3667977..3668417 | 82..522 | 99 | <- | Minus |
2L | 3668471..3668551 | 1..81 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:38:29 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3667977..3668417 | 82..522 | 99 | <- | Minus |
arm_2L | 3668471..3668551 | 1..81 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:23:18 Download gff for
MIP10950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3667977..3668417 | 82..522 | 99 | <- | Minus |
2L | 3668471..3668551 | 1..81 | 100 | | Minus |
MIP10950.pep Sequence
Translation from 20 to 385
> MIP10950.pep
METKFVVITFLISYVLAQSNADCGNKPIVDGNCDQIIKGFTFATEENRCK
KFRAKGCTVGGNYFRAKDECELKCKGYINWGIESFGNGDWEESEIEDYWN
NGSEESEVESISNRGSKKRTL*
MIP10950.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:30:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14658-PA | 110 | GF14658-PA | 9..79 | 7..77 | 159 | 40.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-PA | 121 | CG42461-PA | 1..121 | 1..121 | 659 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 4..76 | 5..74 | 178 | 45.2 | Plus |
Sfp24Bd-PB | 111 | CG42463-PB | 8..77 | 6..75 | 174 | 45.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22739-PA | 111 | GD22739-PA | 1..77 | 3..75 | 180 | 49.4 | Plus |
MIP10950.hyp Sequence
Translation from 20 to 385
> MIP10950.hyp
METKFVVITFLISYVLAQSNADCGNKPIVDGNCDQIIKGFTFATEENRCK
KFRAKGCTVGGNYFRAKDECELKCKGYINWGIESFGNGDWEESEIEDYWN
NGSEESEVESISNRGSKKRTL*
MIP10950.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:34:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-PA | 121 | CG42461-PA | 1..121 | 1..121 | 659 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 4..76 | 5..74 | 178 | 45.2 | Plus |
CG42463-PB | 111 | CG42463-PB | 8..77 | 6..75 | 174 | 45.7 | Plus |