Clone MIP10969 Report

Search the DGRC for MIP10969

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:109
Well:69
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG43049-RB
Protein status:MIP10969.pep: gold
Sequenced Size:754

Clone Sequence Records

MIP10969.complete Sequence

754 bp assembled on 2009-10-08

GenBank Submission: BT099983.1

> MIP10969.complete
AAAATATTTCCGAAATTTCGTGTGAGATCACATATTGCTTTTTTACGAAT
ACTGATTTTCGATCGCGTAATTTGAAGTATGATTAAACTTATGTCAGTTA
AATACCGCCTATGTTCTCTGGGAAGTTCCTACGAAGTGATTGAAGATGCC
TGCCGGGATAGATCAGGTTTCTTTAGTTTATTGGAATCCAGGAAATTCAG
GATTGTGAGGCGCTGCTTTGCGAAATACCTGAGTGAAGGCATACCCTCTT
ATCCTATATATTATTGGTTCGTCCTCATATTTAGTCTATACGGAGCGTTT
AGGAGGTCAATCCTCACCAATAAGGTTGATGGGAGCTTCGAAAATCCAAA
AAATAAGAGAAGACTCAGAATGGCTGGAGCATTTATACAAGCCAATATCT
GGATGCATCTGTTGTATGCGGCTTTATTGGTTTCACCTCATCACATGGCT
CCCTGGTTATTCGTCCATTTGGGGATACTTGCTTGCAAGTTGACTGCGGC
GACCATTAAAGGACACTTCAGATGCCAGGGTGATCTTCGAACCCGGACCA
CAATAAATGCAATTGTATATGTGCTGGTTATAGGTCTAGTTTACCTGGCT
ATGAGGTCATTTACCACTGCCTTAGCAAGGGATGTTCCAGAAAACCTAAG
GCTCTGCTTGAAATTCATAAATCCTTTGCTCAAATATGTAAGAGGCCATT
GAAAGATTATATATGTTAAAAATGCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

MIP10969.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
MB8.chr3L.pasa.56.a 849 MB8.chr3L.pasa.56.a 112..835 1..724 3620 100 Plus
MB8.chr3L.pasa.57.a 760 MB8.chr3L.pasa.57.a 316..743 297..724 2140 100 Plus
MB8.chr3L.pasa.57.a 760 MB8.chr3L.pasa.57.a 2..298 1..297 1485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18915434..18915729 429..724 1480 100 Plus
chr3L 24539361 chr3L 18914712..18915008 1..297 1455 99.3 Plus
chr3L 24539361 chr3L 18915075..18915208 298..431 670 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:13:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18925091..18925387 1..297 1485 100 Plus
3L 28110227 3L 18925813..18926108 429..724 1480 100 Plus
3L 28110227 3L 18925453..18925587 297..431 675 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18918191..18918487 1..297 1485 100 Plus
3L 28103327 3L 18918913..18919208 429..724 1480 100 Plus
3L 28103327 3L 18918553..18918687 297..431 675 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:13:39 has no hits.

MIP10969.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:14:47 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18914712..18915012 1..302 98 -> Plus
chr3L 18915080..18915206 303..429 100 -> Plus
chr3L 18915435..18915729 430..725 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:10 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..624 79..702 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:35:29 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..624 79..702 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:50 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..624 79..702 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:10 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..724 1..724 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:29 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..724 1..724 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:50 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 1..724 1..724 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18925091..18925387 1..297 100 -> Plus
3L 18925454..18925585 298..429 100 -> Plus
3L 18925814..18926108 430..725 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18925091..18925387 1..297 100 -> Plus
3L 18925454..18925585 298..429 100 -> Plus
3L 18925814..18926108 430..725 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18925091..18925387 1..297 100 -> Plus
3L 18925454..18925585 298..429 100 -> Plus
3L 18925814..18926108 430..725 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:29 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18918191..18918487 1..297 100 -> Plus
arm_3L 18918554..18918685 298..429 100 -> Plus
arm_3L 18918914..18919208 430..725 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:52 Download gff for MIP10969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18918191..18918487 1..297 100 -> Plus
3L 18918554..18918685 298..429 100 -> Plus
3L 18918914..18919208 430..725 99   Plus

MIP10969.pep Sequence

Translation from 78 to 701

> MIP10969.pep
MIKLMSVKYRLCSLGSSYEVIEDACRDRSGFFSLLESRKFRIVRRCFAKY
LSEGIPSYPIYYWFVLIFSLYGAFRRSILTNKVDGSFENPKNKRRLRMAG
AFIQANIWMHLLYAALLVSPHHMAPWLFVHLGILACKLTAATIKGHFRCQ
GDLRTRTTINAIVYVLVIGLVYLAMRSFTTALARDVPENLRLCLKFINPL
LKYVRGH*

MIP10969.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG43049-PB 207 CG43049-PB 1..207 1..207 1081 100 Plus
CG43049-PA 213 CG43049-PA 1..213 1..207 1064 97.2 Plus

MIP10969.hyp Sequence

Translation from 78 to 701

> MIP10969.hyp
MIKLMSVKYRLCSLGSSYEVIEDACRDRSGFFSLLESRKFRIVRRCFAKY
LSEGIPSYPIYYWFVLIFSLYGAFRRSILTNKVDGSFENPKNKRRLRMAG
AFIQANIWMHLLYAALLVSPHHMAPWLFVHLGILACKLTAATIKGHFRCQ
GDLRTRTTINAIVYVLVIGLVYLAMRSFTTALARDVPENLRLCLKFINPL
LKYVRGH*

MIP10969.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG43049-PB 207 CG43049-PB 1..207 1..207 1081 100 Plus
CG43049-PA 213 CG43049-PA 1..213 1..207 1064 97.2 Plus