MIP10969.complete Sequence
754 bp assembled on 2009-10-08
GenBank Submission: BT099983.1
> MIP10969.complete
AAAATATTTCCGAAATTTCGTGTGAGATCACATATTGCTTTTTTACGAAT
ACTGATTTTCGATCGCGTAATTTGAAGTATGATTAAACTTATGTCAGTTA
AATACCGCCTATGTTCTCTGGGAAGTTCCTACGAAGTGATTGAAGATGCC
TGCCGGGATAGATCAGGTTTCTTTAGTTTATTGGAATCCAGGAAATTCAG
GATTGTGAGGCGCTGCTTTGCGAAATACCTGAGTGAAGGCATACCCTCTT
ATCCTATATATTATTGGTTCGTCCTCATATTTAGTCTATACGGAGCGTTT
AGGAGGTCAATCCTCACCAATAAGGTTGATGGGAGCTTCGAAAATCCAAA
AAATAAGAGAAGACTCAGAATGGCTGGAGCATTTATACAAGCCAATATCT
GGATGCATCTGTTGTATGCGGCTTTATTGGTTTCACCTCATCACATGGCT
CCCTGGTTATTCGTCCATTTGGGGATACTTGCTTGCAAGTTGACTGCGGC
GACCATTAAAGGACACTTCAGATGCCAGGGTGATCTTCGAACCCGGACCA
CAATAAATGCAATTGTATATGTGCTGGTTATAGGTCTAGTTTACCTGGCT
ATGAGGTCATTTACCACTGCCTTAGCAAGGGATGTTCCAGAAAACCTAAG
GCTCTGCTTGAAATTCATAAATCCTTTGCTCAAATATGTAAGAGGCCATT
GAAAGATTATATATGTTAAAAATGCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
MIP10969.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MB8.chr3L.pasa.56.a | 849 | MB8.chr3L.pasa.56.a | 112..835 | 1..724 | 3620 | 100 | Plus |
MB8.chr3L.pasa.57.a | 760 | MB8.chr3L.pasa.57.a | 316..743 | 297..724 | 2140 | 100 | Plus |
MB8.chr3L.pasa.57.a | 760 | MB8.chr3L.pasa.57.a | 2..298 | 1..297 | 1485 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 18915434..18915729 | 429..724 | 1480 | 100 | Plus |
chr3L | 24539361 | chr3L | 18914712..18915008 | 1..297 | 1455 | 99.3 | Plus |
chr3L | 24539361 | chr3L | 18915075..18915208 | 298..431 | 670 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:13:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18925091..18925387 | 1..297 | 1485 | 100 | Plus |
3L | 28110227 | 3L | 18925813..18926108 | 429..724 | 1480 | 100 | Plus |
3L | 28110227 | 3L | 18925453..18925587 | 297..431 | 675 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 18918191..18918487 | 1..297 | 1485 | 100 | Plus |
3L | 28103327 | 3L | 18918913..18919208 | 429..724 | 1480 | 100 | Plus |
3L | 28103327 | 3L | 18918553..18918687 | 297..431 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 07:13:39 has no hits.
MIP10969.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:14:47 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 18914712..18915012 | 1..302 | 98 | -> | Plus |
chr3L | 18915080..18915206 | 303..429 | 100 | -> | Plus |
chr3L | 18915435..18915729 | 430..725 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:10 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..624 | 79..702 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:35:29 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..624 | 79..702 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:50 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..624 | 79..702 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:10 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..724 | 1..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:29 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..724 | 1..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:50 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 1..724 | 1..724 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18925091..18925387 | 1..297 | 100 | -> | Plus |
3L | 18925454..18925585 | 298..429 | 100 | -> | Plus |
3L | 18925814..18926108 | 430..725 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18925091..18925387 | 1..297 | 100 | -> | Plus |
3L | 18925454..18925585 | 298..429 | 100 | -> | Plus |
3L | 18925814..18926108 | 430..725 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:47 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18925091..18925387 | 1..297 | 100 | -> | Plus |
3L | 18925454..18925585 | 298..429 | 100 | -> | Plus |
3L | 18925814..18926108 | 430..725 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:29 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18918191..18918487 | 1..297 | 100 | -> | Plus |
arm_3L | 18918554..18918685 | 298..429 | 100 | -> | Plus |
arm_3L | 18918914..18919208 | 430..725 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:52 Download gff for
MIP10969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18918191..18918487 | 1..297 | 100 | -> | Plus |
3L | 18918554..18918685 | 298..429 | 100 | -> | Plus |
3L | 18918914..18919208 | 430..725 | 99 | | Plus |
MIP10969.pep Sequence
Translation from 78 to 701
> MIP10969.pep
MIKLMSVKYRLCSLGSSYEVIEDACRDRSGFFSLLESRKFRIVRRCFAKY
LSEGIPSYPIYYWFVLIFSLYGAFRRSILTNKVDGSFENPKNKRRLRMAG
AFIQANIWMHLLYAALLVSPHHMAPWLFVHLGILACKLTAATIKGHFRCQ
GDLRTRTTINAIVYVLVIGLVYLAMRSFTTALARDVPENLRLCLKFINPL
LKYVRGH*
MIP10969.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-PB | 207 | CG43049-PB | 1..207 | 1..207 | 1081 | 100 | Plus |
CG43049-PA | 213 | CG43049-PA | 1..213 | 1..207 | 1064 | 97.2 | Plus |
MIP10969.hyp Sequence
Translation from 78 to 701
> MIP10969.hyp
MIKLMSVKYRLCSLGSSYEVIEDACRDRSGFFSLLESRKFRIVRRCFAKY
LSEGIPSYPIYYWFVLIFSLYGAFRRSILTNKVDGSFENPKNKRRLRMAG
AFIQANIWMHLLYAALLVSPHHMAPWLFVHLGILACKLTAATIKGHFRCQ
GDLRTRTTINAIVYVLVIGLVYLAMRSFTTALARDVPENLRLCLKFINPL
LKYVRGH*
MIP10969.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-PB | 207 | CG43049-PB | 1..207 | 1..207 | 1081 | 100 | Plus |
CG43049-PA | 213 | CG43049-PA | 1..213 | 1..207 | 1064 | 97.2 | Plus |