Clone MIP11263 Report

Search the DGRC for MIP11263

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:112
Well:63
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG14118-RA
Protein status:MIP11263.pep: gold
Sequenced Size:1668

Clone Sequence Records

MIP11263.complete Sequence

1668 bp assembled on 2009-06-26

GenBank Submission: BT088882.1

> MIP11263.complete
AATTCAGTCGGCGGTTAGATAGCAACTTAACCGGTCGAGTTGAGTTTCCA
ACAAAATGATGCTTCAGTTTATCGGCCTAATTTTGGCGGTCGTGATTCTG
CGAGAGATTCGGGCACGTGAGGCGATCGCAACCATTCCAGATGTGGGTCA
GATAATCAAAGATCTCGATGGACTGCACATCGATGGAGAAATGTTTCATC
AAGGTTCTCCCTGCAGAGTGGATGTGCAAAATGATCTGCCCCGTTTGGAT
AAAGTGCAGCCGCTGTACCTGCGCCCAGGAACAGATCTCTACTGGCTGCC
CAATGCTTATGGGCACCTGGAGGTTCAACGCGGCGCCAGCATCGAGCTGC
ACTGCAGCCATTCGTTCGCGCCCGCGAATGGAGAGTCTTTGGATGCGAAG
CTGCGTTCCATTCGGGTGAAGTGCGTGCAGGACACCACCTTCGAGTGGAT
GGGGGCTAAAATCCATTTCAGCGACTTTGTCTGCAATCACTCCATGCCCT
ACACCGTGGAGCGATTGGACAGGAGTTGTGGCAGCGACACTCCGAGTCCA
TCCACCTCGTACTTGTATCGCGTGGGCTATGACACCGGAGATGGCAGATT
TGTGGCCACCATGGAGCTGTGCCACGACCCAAATCAACTGCGCACCCACT
ACGCCCACCATCAACTGACACCGGCGAATGTGCACTTCCAGAAAAAATTG
AAACGCCCGAGGTTTAGCACCGCCGGCCATTTCACGGGCTTTGACATGGC
CAGAATTTATTCGCCCAAGAGCCAGGAGAAACTGATGGTGCCCGGCCTCA
TTGACGTGAAGAGTGGTCTGTTCCTGGCCCGCGGACATTTGACGGCCAAA
GCGGATCTAATCTATGCTAGCCAACAGAAGAGCAGCTTCAACTACATGAA
CGTGGCGCCGCAATGGCAGAGCTTCAATGGTGGTCAGTGGTCCAAGCTGG
AGGAATCCACCCGACAATATGTGGCCCGTTCGGGCATCACGGCCACTGTG
TATACGGGCATCTATGGCGAAATGAAGGTGGCTGGCAGCAAAGTCCTCCA
CATGACCACCAATGCCAATAACATAGGTGTGGTGGCCGTGCCCCAGCTCT
TCTATCGCGTCCTCATCGACGAGGGCCATCCGACCCGCGGAATCGCTTTG
GTGGGTGTGAATAACCCACATGCCACCCTGGCCCAGATCCACGAGTCCTA
TATCATCTGCGATCCAGTGGAGGAGTCGGTGCAGTGGCTTAGCTGGCTGC
ACAAAAGCAACGCCAAGGGTAACCTGAAGAATGGCTATCTGTATGCCTGT
TCGGTGGCGAATTTGGCCCGGGCTGTCGGACATTTGCCACGCCCACTTCT
CGAAGTGGATGAGCTGCTCACTTAGATGTGGGCGGTGGCGGTTCGATTGC
CCGTACTTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGACACAA
CTGCAGTTTGGTATTAGTGAAAATCACGTCACAACACTGCAACGAATGTG
CAAACCCTTGAAAACAATTTTGCAGAAATGCATTACTGTATAAATATATA
TACATATATTTCCTTTGAGCTATTAAGAATAATTCATGATTATCTGGTAC
AAAAAAAAAAAACATAAACATCATAAATCTTGGAATTTAAACAAAAAAAA
AAAAAAAAAAAAAAAAAA

MIP11263.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14118-RA 1674 CG14118-RA 1..1644 1..1645 8170 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12883695..12885133 202..1641 7135 99.9 Plus
chr3L 24539361 chr3L 12883031..12883234 2..205 1020 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12893323..12894765 202..1645 7155 99.9 Plus
3L 28110227 3L 12892658..12892862 1..205 1025 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12886423..12887865 202..1645 7165 99.8 Plus
3L 28103327 3L 12885758..12885962 1..205 1025 100 Plus
Blast to na_te.dros performed on 2019-03-16 10:43:46 has no hits.

MIP11263.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:44:51 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12883030..12883232 1..203 99 -> Plus
chr3L 12883697..12885133 204..1642 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:11:18 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1320 56..1375 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:49:09 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1320 56..1375 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:52:43 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1320 56..1375 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:20 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1320 56..1375 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-30 13:55:10 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1320 56..1375 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:49:09 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1637 1..1638 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:52:43 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1637 1..1638 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:20 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14118-RA 1..1637 1..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:44:51 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12892658..12892860 1..203 100 -> Plus
3L 12893325..12894761 204..1642 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:44:51 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12892658..12892860 1..203 100 -> Plus
3L 12893325..12894761 204..1642 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:44:51 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12892658..12892860 1..203 100 -> Plus
3L 12893325..12894761 204..1642 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:52:43 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12885758..12885960 1..203 100 -> Plus
arm_3L 12886425..12887861 204..1642 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:24:51 Download gff for MIP11263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12885758..12885960 1..203 100 -> Plus
3L 12886425..12887861 204..1642 99   Plus

MIP11263.pep Sequence

Translation from 55 to 1374

> MIP11263.pep
MMLQFIGLILAVVILREIRAREAIATIPDVGQIIKDLDGLHIDGEMFHQG
SPCRVDVQNDLPRLDKVQPLYLRPGTDLYWLPNAYGHLEVQRGASIELHC
SHSFAPANGESLDAKLRSIRVKCVQDTTFEWMGAKIHFSDFVCNHSMPYT
VERLDRSCGSDTPSPSTSYLYRVGYDTGDGRFVATMELCHDPNQLRTHYA
HHQLTPANVHFQKKLKRPRFSTAGHFTGFDMARIYSPKSQEKLMVPGLID
VKSGLFLARGHLTAKADLIYASQQKSSFNYMNVAPQWQSFNGGQWSKLEE
STRQYVARSGITATVYTGIYGEMKVAGSKVLHMTTNANNIGVVAVPQLFY
RVLIDEGHPTRGIALVGVNNPHATLAQIHESYIICDPVEESVQWLSWLHK
SNAKGNLKNGYLYACSVANLARAVGHLPRPLLEVDELLT*

MIP11263.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:21:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23747-PA 436 GF23747-PA 7..435 4..438 1552 66.6 Plus
Dana\GF23745-PA 1337 GF23745-PA 918..1335 27..438 618 32 Plus
Dana\GF10795-PA 424 GF10795-PA 5..416 1..429 598 31 Plus
Dana\GF23654-PA 429 GF23654-PA 56..419 53..428 589 32.1 Plus
Dana\GF23745-PA 1337 GF23745-PA 10..421 9..438 560 31 Plus
Dana\GF23745-PA 1337 GF23745-PA 565..939 51..438 520 30.4 Plus
Dana\GF16434-PA 351 GF16434-PA 100..312 155..374 179 27 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15609-PA 439 GG15609-PA 1..439 1..439 2083 86.8 Plus
Dere\GG15605-PA 1395 GG15605-PA 977..1393 26..438 599 32.4 Plus
Dere\GG13440-PA 423 GG13440-PA 5..415 1..429 595 29.5 Plus
Dere\GG16016-PA 430 GG16016-PA 57..420 53..428 586 31.5 Plus
Dere\GG15605-PA 1395 GG15605-PA 624..999 50..438 541 32.8 Plus
Dere\GG15605-PA 1395 GG15605-PA 47..424 53..438 539 32.2 Plus
Dere\GG12061-PA 346 GG12061-PA 99..325 155..392 207 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:21:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14489-PA 443 GH14489-PA 1..440 2..438 1185 51.6 Plus
Dgri\GH14485-PA 1418 GH14485-PA 992..1411 27..438 654 34 Plus
Dgri\GH14605-PA 421 GH14605-PA 43..411 48..428 586 31.9 Plus
Dgri\GH14485-PA 1418 GH14485-PA 43..420 53..438 567 33.7 Plus
Dgri\GH19648-PA 611 GH19648-PA 7..410 6..428 564 32.3 Plus
Dgri\GH16960-PA 430 GH16960-PA 47..422 45..429 561 30.2 Plus
Dgri\GH14485-PA 1418 GH14485-PA 656..1013 72..438 480 30.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14118-PA 439 CG14118-PA 1..439 1..439 2328 100 Plus
CG14120-PA 1371 CG14120-PA 953..1369 26..438 601 33 Plus
CG6839-PA 430 CG6839-PA 57..420 53..428 567 32.3 Plus
CG3819-PB 423 CG3819-PB 5..414 1..428 560 29.5 Plus
CG3819-PA 423 CG3819-PA 5..414 1..428 560 29.5 Plus
CG14120-PA 1371 CG14120-PA 601..975 51..438 518 31 Plus
CG14120-PA 1371 CG14120-PA 47..424 53..438 506 30.6 Plus
CG14062-PB 346 CG14062-PB 99..321 161..388 180 26.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:21:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13645-PA 417 GI13645-PA 6..414 29..438 993 48.8 Plus
Dmoj\GI13641-PA 1340 GI13641-PA 919..1336 27..438 659 34.3 Plus
Dmoj\GI13492-PA 429 GI13492-PA 42..419 39..428 609 31.9 Plus
Dmoj\GI11823-PA 431 GI11823-PA 43..423 40..429 564 30 Plus
Dmoj\GI13641-PA 1340 GI13641-PA 43..410 53..428 555 32.4 Plus
Dmoj\GI13641-PA 1340 GI13641-PA 564..940 49..438 535 32.4 Plus
Dmoj\GI22179-PA 301 GI22179-PA 29..255 143..375 155 23.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:21:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14338-PA 445 GL14338-PA 7..444 3..438 1326 58.4 Plus
Dper\GL22028-PA 424 GL22028-PA 38..416 42..429 627 33.2 Plus
Dper\GL25261-PA 1333 GL25261-PA 913..1331 27..438 627 33.6 Plus
Dper\GL21712-PA 430 GL21712-PA 53..420 49..428 597 32.2 Plus
Dper\GL25261-PA 1333 GL25261-PA 41..426 38..438 558 31.2 Plus
Dper\GL25261-PA 1333 GL25261-PA 577..924 72..428 500 31.1 Plus
Dper\GL13697-PA 351 GL13697-PA 75..344 143..414 171 24.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:21:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22977-PA 445 GA22977-PA 7..444 3..438 1316 58.2 Plus
Dpse\GA12772-PA 1333 GA12772-PA 913..1331 27..438 637 33.6 Plus
Dpse\GA17708-PA 423 GA17708-PA 37..415 42..429 628 33.2 Plus
Dpse\GA19896-PA 430 GA19896-PA 53..420 49..428 597 32.2 Plus
Dpse\GA12772-PA 1333 GA12772-PA 41..426 38..438 559 31.2 Plus
Dpse\GA12772-PA 1333 GA12772-PA 577..924 72..428 505 31.4 Plus
Dpse\GA12733-PA 346 GA12733-PA 94..344 150..420 194 25.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:21:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25382-PA 439 GM25382-PA 1..439 1..439 2254 94.8 Plus
Dsec\GM14909-PA 423 GM14909-PA 5..414 1..428 598 29.8 Plus
Dsec\GM15005-PA 430 GM15005-PA 57..420 53..428 596 32.3 Plus
Dsec\GM25379-PA 1349 GM25379-PA 930..1347 25..438 582 32 Plus
Dsec\GM25379-PA 1349 GM25379-PA 578..953 50..438 538 31.8 Plus
Dsec\GM25379-PA 1349 GM25379-PA 47..424 53..438 531 31.5 Plus
Dsec\GM12290-PA 346 GM12290-PA 99..325 155..392 201 27.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14414-PA 439 GD14414-PA 1..439 1..439 2266 95.2 Plus
Dsim\GD14783-PA 430 GD14783-PA 57..420 53..428 596 32.3 Plus
Dsim\GD14412-PA 1338 GD14412-PA 919..1336 25..438 589 32.1 Plus
Dsim\GD14412-PA 1338 GD14412-PA 567..942 50..438 535 31.6 Plus
Dsim\GD14412-PA 1338 GD14412-PA 47..424 53..438 527 31.2 Plus
Dsim\GD12316-PA 314 GD12316-PA 153..306 274..429 316 36.2 Plus
Dsim\GD18024-PA 346 GD18024-PA 99..325 155..392 201 27.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13978-PA 988 GJ13978-PA 550..984 18..438 1186 53 Plus
Dvir\GJ13976-PA 1389 GJ13976-PA 963..1385 25..438 647 33.3 Plus
Dvir\GJ11853-PA 428 GJ11853-PA 55..418 53..428 599 32.6 Plus
Dvir\GJ13524-PA 429 GJ13524-PA 49..420 48..428 569 31 Plus
Dvir\GJ13976-PA 1389 GJ13976-PA 35..421 48..438 531 31.7 Plus
Dvir\GJ13976-PA 1389 GJ13976-PA 629..986 72..438 501 32.6 Plus
Dvir\GJ22194-PA 320 GJ22194-PA 73..218 161..306 159 30.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17354-PA 468 GK17354-PA 6..459 4..439 1177 51.5 Plus
Dwil\GK10387-PA 432 GK10387-PA 55..422 49..428 635 34.5 Plus
Dwil\GK16832-PA 1403 GK16832-PA 1035..1401 69..438 633 34.5 Plus
Dwil\GK12612-PA 424 GK12612-PA 1..416 2..429 618 30 Plus
Dwil\GK16832-PA 1403 GK16832-PA 50..417 53..428 545 31.6 Plus
Dwil\GK16832-PA 1403 GK16832-PA 638..1010 53..438 514 31.1 Plus
Dwil\GK18004-PA 321 GK18004-PA 16..314 86..415 205 26.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21936-PA 439 GE21936-PA 1..439 1..439 2136 89.1 Plus
Dyak\GE21933-PA 1340 GE21933-PA 921..1338 25..438 606 32.8 Plus
Dyak\GE19581-PA 430 GE19581-PA 57..420 53..428 593 32.3 Plus
Dyak\GE22538-PA 423 GE22538-PA 6..414 2..428 592 29.6 Plus
Dyak\GE21933-PA 1340 GE21933-PA 569..944 50..438 559 33.6 Plus
Dyak\GE21933-PA 1340 GE21933-PA 39..424 49..438 535 31.4 Plus
Dyak\GE10502-PA 346 GE10502-PA 99..344 155..420 199 25.3 Plus

MIP11263.hyp Sequence

Translation from 55 to 1374

> MIP11263.hyp
MMLQFIGLILAVVILREIRAREAIATIPDVGQIIKDLDGLHIDGEMFHQG
SPCRVDVQNDLPRLDKVQPLYLRPGTDLYWLPNAYGHLEVQRGASIELHC
SHSFAPANGESLDAKLRSIRVKCVQDTTFEWMGAKIHFSDFVCNHSMPYT
VERLDRSCGSDTPSPSTSYLYRVGYDTGDGRFVATMELCHDPNQLRTHYA
HHQLTPANVHFQKKLKRPRFSTAGHFTGFDMARIYSPKSQEKLMVPGLID
VKSGLFLARGHLTAKADLIYASQQKSSFNYMNVAPQWQSFNGGQWSKLEE
STRQYVARSGITATVYTGIYGEMKVAGSKVLHMTTNANNIGVVAVPQLFY
RVLIDEGHPTRGIALVGVNNPHATLAQIHESYIICDPVEESVQWLSWLHK
SNAKGNLKNGYLYACSVANLARAVGHLPRPLLEVDELLT*

MIP11263.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14118-PA 439 CG14118-PA 1..439 1..439 2328 100 Plus
CG14120-PA 1371 CG14120-PA 953..1369 26..438 601 33 Plus
CG6839-PA 430 CG6839-PA 57..420 53..428 567 32.3 Plus
CG3819-PB 423 CG3819-PB 5..414 1..428 560 29.5 Plus
CG3819-PA 423 CG3819-PA 5..414 1..428 560 29.5 Plus
CG14120-PA 1371 CG14120-PA 601..975 51..438 518 31 Plus
CG14120-PA 1371 CG14120-PA 47..424 53..438 506 30.6 Plus