Clone MIP11318 Report

Search the DGRC for MIP11318

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:113
Well:18
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG14551-RA
Protein status:MIP11318.pep: gold
Sequenced Size:1461

Clone Sequence Records

MIP11318.complete Sequence

1461 bp assembled on 2009-06-26

GenBank Submission: BT088885.1

> MIP11318.complete
ATATAATATCGTTAGCTAATCAGAGAGGAGCAATGAAATTCAGGGCTTTC
AGATCAAAGCGAGCTGCGAGAACTTTGAAGATAGGAAAAACTGAATGACT
ACCGAGAACCCACTGACTGCCATCGATGCAAAATGATTGAATTCAATATG
GGGCTGGCACTTAACATCCATCAAAACACTAAACGAGGAGTATTTAGAAC
GGCGGCAGCAGCGGCAACCAGTTGTTGCCGGTTGCATGTTGTTGCCGGTT
GACATATGAGCAGCAGCAACATCAGTTGCAGCAGCAACAGCGGCAGCAGC
AACAAAGAAGAAAGGAACTTTTGCCGCCACACCAAAGTCCGGTGTTTTTC
GATGAGAGCGGCTACTACACAGAAATCCTGGGCAACTGGGCAGAGACCTA
ACAAGCTGCAGAAGCGGCCCAGAATTATGTAACAACCGCACTGGCAGTGG
CCCGCAAATTTGCAAGTCAAGAGTCACTGGAGATGTCACTCTGCGCGGAT
GGACAACTCGGCGACAGCTGAGCAAAGCGACCGCCGTCGCCTGGACTTCT
TGGTTCATCGTTTTCAGCGTCCGTTCGCCCGTTTGGTTGTTGAACTTAAT
CCCAGCATGATGGTGCAACATTCAGCGAGGGTCCGTTGTCCTGGCAAGGT
TGTTATGGACGCACATCGTCACTTGTTTGTTTGTTGTGGCAAACACAGCG
GATCTCAACCGGATTAAACAGTAAGCAAGCAAAAGCGCTAGACCATCAAC
ATTTGCCCTCCGAGAACCGAAAACCACCGAAGATGATCTCACGACGCGAC
AAATTGCTGCAGCAGCCGTGGGAGCAACTGCGGTACGCCCAGCACCGCGA
GAAGGTCATGTCCGCCCGCCCAGCCATTGACACCCACTCGCCGCGCGCCC
ACGAACACGTGCAGCGCAAGTGGAAGAAGCAGCAAGTGGAGCGGGAGCGC
CAGCAGCAGATCGAGCGGGAGAACCTAAGACTCCTCCAGAAACTGGGCGA
CATCATGCGCACCAAGCGCATCAACAATCTCTGGCTGGAGCCGCGGCCCA
ATTTTCTTAACCGCGAGAAGCTTTTTGCCACCCGTCCGTACTCCAGCCTC
CCGGAAGTGGTCACCATTTACGGAAAACAACCGCCGGGACCACTTATCTA
TGGCATGCTGCCCAAACCGGCGGTTGTGGGTCGGTGTCCCACCTGCAGCG
GCAATCCGGAGCGCACCGAGGTGGCCATACCCGAGCAGCGAACTCCTTGG
GCGCCCGAGAGAAAGTCCTGGAACCGGAAGACCCAGGAGCAAGTAAAGCC
GCATCGATGCTACCACTGCGGATCTGTAAAGACCAGCGAACGCAAGTACT
TCGAGGAATTCTCCTACTCTTACTCCTACGACGAATGATGTAGATCGTGG
TTCGTGGGTCAAATAAAAGTAAATTCAAGTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

MIP11318.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14551-RA 1539 CG14551-RA 108..1539 1..1432 7160 100 Plus
CG14544-RA 1179 CG14544-RA 1095..1179 1433..1349 425 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21884946..21885997 1051..1 5165 99.6 Minus
chr3R 27901430 chr3R 21884257..21884637 1432..1052 1890 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:12:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26061961..26063011 1051..1 5255 100 Minus
3R 32079331 3R 26061267..26061648 1433..1052 1910 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25802792..25803842 1051..1 5255 100 Minus
3R 31820162 3R 25802098..25802479 1433..1052 1910 100 Minus
Blast to na_te.dros performed 2019-03-16 18:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 672..712 968..928 115 75.6 Minus

MIP11318.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:38:45 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21884257..21884637 1052..1432 99 <- Minus
chr3R 21884946..21885997 1..1051 95   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:11:16 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..606 783..1388 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:49:13 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..606 783..1388 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:01 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..606 783..1388 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:17 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..606 783..1388 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-30 13:55:07 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..606 783..1388 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:49:13 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..1432 1..1432 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:01 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..1432 1..1432 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:17 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
CG14551-RA 1..1432 1..1432 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:45 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26061268..26061648 1052..1432 100 <- Minus
3R 26061961..26063011 1..1051 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:45 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26061268..26061648 1052..1432 100 <- Minus
3R 26061961..26063011 1..1051 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:45 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26061268..26061648 1052..1432 100 <- Minus
3R 26061961..26063011 1..1051 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:01 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21886990..21887370 1052..1432 100 <- Minus
arm_3R 21887683..21888733 1..1051 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:24:55 Download gff for MIP11318.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25802099..25802479 1052..1432 100 <- Minus
3R 25802792..25803842 1..1051 100   Minus

MIP11318.pep Sequence

Translation from 782 to 1387

> MIP11318.pep
MISRRDKLLQQPWEQLRYAQHREKVMSARPAIDTHSPRAHEHVQRKWKKQ
QVERERQQQIERENLRLLQKLGDIMRTKRINNLWLEPRPNFLNREKLFAT
RPYSSLPEVVTIYGKQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIP
EQRTPWAPERKSWNRKTQEQVKPHRCYHCGSVKTSERKYFEEFSYSYSYD
E*

MIP11318.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16507-PA 201 GF16507-PA 1..201 1..201 1004 92.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12198-PA 201 GG12198-PA 1..201 1..201 1061 99 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18139-PA 199 GH18139-PA 1..199 1..200 798 78 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14551-PB 201 CG14551-PB 1..201 1..201 1093 100 Plus
CG14551-PA 201 CG14551-PA 1..201 1..201 1093 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:21:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22900-PA 199 GI22900-PA 1..198 1..197 807 76.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:21:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22010-PA 203 GL22010-PA 1..200 1..200 890 87.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13077-PA 203 GA13077-PA 1..200 1..200 895 88 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10196-PA 201 GM10196-PA 1..201 1..201 1064 99.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:21:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18146-PA 152 GD18146-PA 1..152 1..201 733 74.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23313-PA 196 GJ23313-PA 1..195 1..197 761 79.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12798-PA 203 GK12798-PA 1..203 1..201 850 83.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10641-PA 201 GE10641-PA 1..201 1..201 1045 97.5 Plus

MIP11318.hyp Sequence

Translation from 782 to 1387

> MIP11318.hyp
MISRRDKLLQQPWEQLRYAQHREKVMSARPAIDTHSPRAHEHVQRKWKKQ
QVERERQQQIERENLRLLQKLGDIMRTKRINNLWLEPRPNFLNREKLFAT
RPYSSLPEVVTIYGKQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIP
EQRTPWAPERKSWNRKTQEQVKPHRCYHCGSVKTSERKYFEEFSYSYSYD
E*

MIP11318.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14551-PB 201 CG14551-PB 1..201 1..201 1093 100 Plus
CG14551-PA 201 CG14551-PA 1..201 1..201 1093 100 Plus