Clone MIP11562 Report

Search the DGRC for MIP11562

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:115
Well:62
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG30414-RB
Protein status:MIP11562.pep: gold
Sequenced Size:1109

Clone Sequence Records

MIP11562.complete Sequence

1109 bp assembled on 2009-06-19

GenBank Submission: BT088842.1

> MIP11562.complete
GATTCCTATCATATCCGTTTCCGTTGACGGTCATAAAGAGTGTACTGTTA
TCAGCTGGTCAACATAAAATTCCTCAAAAATTACCTCAAACTCGACTAAG
CTTGCCAGTCGCTCCATTACCGCGAAAAGATGAAGTTCATCGCAGCTGGA
TTAGCTCTTCTGGTCTGCTCCATCCAGTTGGGTGAAGGAGCACCTGGTCA
CCTGCTAGACTCCAGTTGTGGCACGACAAAACCAGAATTTATCCCAATGA
TCACCGGGGGCGCAGACGCAGGCCTATTCTCAAATCCATGGATGGTGAAG
GTGCTAGGCGAGAAACTATGTGGTGGCTCGCTAATCACCAGTCGCTTCGT
TCTCACGGCCGCCCATTGCATCGTTAGTACACACATGAGAGTACGCTTGG
GCGAGTATAAAACCCGCTTTCCTGGCAAGGATTGCTCGCGCTGCGTGCCC
AAGTCATATAAACTCAGGAGAATACGCTTGGGCGAGTATGACACCCGCTT
TCCTGGCAAGGATTGCTGCGTGCCCAAGTCATATGAACTCGCTGTGGATA
GAAAGATTTTGCATGCGGATTATAACCTAAACTTGGACAACGACATCGGC
CTGTTGCGCATGAAGAGCTTCGTCCAGTACTCAGACTACGTCCGGCCGAT
CTGTCTCCTGGTCGAGGGACACATGGCGGAAAGTCCCATCTTCAACATCA
CCGGCTGGGGTGTCACCAACGATGGCACGCCCAGCCGGAGGCTCCAGAGG
GCCACTGTGTACAACACCGACCTCCACTTCTGCCGAAGCAAGTTCACCAA
GCAGGTGGATGAGTCGCAGATTTGTGCTGCTGGCACAAATAGCGATGCAT
GCCACGGCGACTCGGGAGGCCCGCTGAGCGCACAGGTTCCTTTTGCCGGC
AGCTGGCTGACCTTCCAGTACGGACTGGTCAGCTACGGGTCGGCGGCATG
CCATTCCTTCTCCGTTTACACCAACGTTACGCACCACAGGGACTGGATTG
TGAACGCCATCGAAGACTTCAGCAGAGCTTTCCAGCTTAGACTCTAGCTA
CTCATAATAACATTTCGTTGGCTTTTCTAAGAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

MIP11562.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:32:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG30414.b 1729 CG30414.b 1..1085 1..1085 5425 100 Plus
CG30414.c 1545 CG30414.c 1..1085 1..1085 5425 100 Plus
CG30414-RB 1176 CG30414-RB 14..1098 1..1085 5425 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19270515..19270965 1081..631 2195 99.1 Minus
chr2R 21145070 chr2R 19271427..19271770 344..1 1720 100 Minus
chr2R 21145070 chr2R 19271017..19271269 634..382 1250 99.6 Minus
chr2R 21145070 chr2R 19271186..19271267 540..465 225 87.8 Minus
chr2R 21145070 chr2R 19271319..19271362 387..344 220 100 Minus
chr2R 21145070 chr2R 19271111..19271183 465..387 210 87.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:13:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23384196..23384650 1085..631 2275 100 Minus
2R 25286936 2R 23385112..23385455 344..1 1720 100 Minus
2R 25286936 2R 23384702..23384954 634..382 1250 99.6 Minus
2R 25286936 2R 23384871..23384952 540..465 225 87.8 Minus
2R 25286936 2R 23385004..23385047 387..344 220 100 Minus
2R 25286936 2R 23384796..23384868 465..387 210 87.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23385395..23385849 1085..631 2275 100 Minus
2R 25260384 2R 23386311..23386654 344..1 1720 100 Minus
2R 25260384 2R 23385901..23386153 634..382 1250 99.6 Minus
2R 25260384 2R 23386203..23386246 387..344 220 100 Minus
Blast to na_te.dros performed on 2019-03-16 17:34:20 has no hits.

MIP11562.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:35:20 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19270515..19270961 635..1081 99 <- Minus
chr2R 19271017..19271264 387..634 100 <- Minus
chr2R 19271320..19271362 344..386 100 <- Minus
chr2R 19271428..19271770 1..343 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:41 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RA 1..880 130..1012 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:48:12 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 1..918 130..1047 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:35:40 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 1..918 130..1047 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:02:04 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 1..918 130..1047 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-19 11:14:42 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RA 1..880 130..1012 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:48:11 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:40 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 14..1094 1..1081 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:02:04 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
CG30414-RB 14..1094 1..1081 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:35:20 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23384200..23384646 635..1081 100 <- Minus
2R 23384702..23384949 387..634 100 <- Minus
2R 23385005..23385047 344..386 100 <- Minus
2R 23385113..23385455 1..343 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:35:20 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23384200..23384646 635..1081 100 <- Minus
2R 23384702..23384949 387..634 100 <- Minus
2R 23385005..23385047 344..386 100 <- Minus
2R 23385113..23385455 1..343 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:35:20 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23384200..23384646 635..1081 100 <- Minus
2R 23384702..23384949 387..634 100 <- Minus
2R 23385005..23385047 344..386 100 <- Minus
2R 23385113..23385455 1..343 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:40 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19272225..19272472 387..634 100 <- Minus
arm_2R 19272528..19272570 344..386 100 <- Minus
arm_2R 19272636..19272978 1..343 100   Minus
arm_2R 19271723..19272169 635..1081 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:45 Download gff for MIP11562.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23385417..23385863 635..1081 100 <- Minus
2R 23385919..23386166 387..634 100 <- Minus
2R 23386222..23386264 344..386 100 <- Minus
2R 23386330..23386672 1..343 100   Minus

MIP11562.pep Sequence

Translation from 129 to 1046

> MIP11562.pep
MKFIAAGLALLVCSIQLGEGAPGHLLDSSCGTTKPEFIPMITGGADAGLF
SNPWMVKVLGEKLCGGSLITSRFVLTAAHCIVSTHMRVRLGEYKTRFPGK
DCSRCVPKSYKLRRIRLGEYDTRFPGKDCCVPKSYELAVDRKILHADYNL
NLDNDIGLLRMKSFVQYSDYVRPICLLVEGHMAESPIFNITGWGVTNDGT
PSRRLQRATVYNTDLHFCRSKFTKQVDESQICAAGTNSDACHGDSGGPLS
AQVPFAGSWLTFQYGLVSYGSAACHSFSVYTNVTHHRDWIVNAIEDFSRA
FQLRL*

MIP11562.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12091-PA 280 GF12091-PA 4..260 6..290 366 33.3 Plus
Dana\GF16252-PA 399 GF16252-PA 115..398 22..295 358 34.5 Plus
Dana\GF15010-PA 628 GF15010-PA 407..625 64..296 358 35.7 Plus
Dana\GF13370-PA 505 GF13370-PA 9..279 25..296 354 33 Plus
Dana\GF23198-PA 392 GF23198-PA 128..391 41..295 334 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20038-PA 289 GG20038-PA 1..281 1..301 857 57.8 Plus
Dere\GG20772-PA 333 GG20772-PA 1..283 1..297 582 41.6 Plus
Dere\GG18032-PA 282 GG18032-PA 3..281 2..298 544 41.4 Plus
Dere\GG20769-PA 285 GG20769-PA 24..278 24..290 405 37.7 Plus
Dere\GG20540-PA 291 GG20540-PA 20..277 21..294 395 34.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17456-PA 395 GH17456-PA 112..394 22..295 399 35.3 Plus
Dgri\GH20624-PA 374 GH20624-PA 106..368 29..294 333 30.8 Plus
Dgri\GH17524-PA 374 GH17524-PA 106..368 29..294 333 30.8 Plus
Dgri\GH14281-PA 578 GH14281-PA 314..577 41..295 320 30.9 Plus
Dgri\GH20292-PA 242 GH20292-PA 1..239 50..294 310 32 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG30414-PC 305 CG30414-PC 1..305 1..305 1638 100 Plus
CG30414-PB 305 CG30414-PB 1..305 1..305 1638 100 Plus
CG30289-PA 316 CG30289-PA 1..278 1..297 656 46.2 Plus
CG30288-PC 282 CG30288-PC 24..282 23..302 559 44 Plus
CG33225-PB 292 CG33225-PB 11..278 8..294 490 39.5 Plus
CG33225-PC 307 CG33225-PC 26..293 8..294 490 39.5 Plus
CG14227-PB 286 CG14227-PB 1..285 1..298 483 38 Plus
CG30287-PA 284 CG30287-PA 5..277 5..290 466 39.4 Plus
CG33226-PC 292 CG33226-PC 13..290 10..298 421 34.2 Plus
CG30283-PB 273 CG30283-PB 5..267 2..294 417 33.7 Plus
CG30090-PA 291 CG30090-PA 5..278 4..295 385 34.9 Plus
CG30091-PA 526 CG30091-PA 4..279 6..296 384 33.4 Plus
SPE-PA 400 CG16705-PA 114..399 14..295 378 33.8 Plus
CG33459-PA 284 CG33459-PA 1..272 1..290 373 36.4 Plus
CG30087-PA 277 CG30087-PA 1..274 1..294 372 33.4 Plus
CG33458-PA 281 CG33458-PA 1..275 1..294 366 33.2 Plus
CG30082-PB 280 CR30082-PB 7..273 6..292 354 33.8 Plus
CG30083-PB 279 CG30083-PB 10..263 15..298 350 31.9 Plus
CG43336-PA 279 CG43336-PA 22..272 26..291 347 33.6 Plus
CG30286-PB 277 CG30286-PB 17..272 21..294 344 32.3 Plus
CG43335-PA 281 CG43335-PA 1..281 1..299 342 30.5 Plus
CG30088-PB 281 CG30088-PB 12..272 8..290 331 31.6 Plus
ea-PA 392 CG4920-PA 128..391 41..295 331 33.3 Plus
ea-PB 261 CG4920-PB 9..260 53..295 325 33.7 Plus
CG43110-PA 483 CG43110-PA 8..258 10..294 317 28.7 Plus
CG43110-PB 483 CG43110-PB 8..258 10..294 317 28.7 Plus
grass-PA 335 CG5896-PA 77..330 41..294 314 29.8 Plus
grass-PB 377 CG5896-PB 119..372 41..294 314 29.8 Plus
CG10232-PD 509 CG10232-PD 240..503 22..290 312 32.1 Plus
CG18636-PA 349 CG18636-PA 14..279 11..291 311 30.6 Plus
CG30187-PE 489 CG30187-PE 24..268 26..298 310 33.6 Plus
CG30187-PF 500 CG30187-PF 24..268 26..298 310 33.6 Plus
CG10764-PA 523 CG10764-PA 1..264 1..294 308 29.9 Plus
CG30002-PB 311 CG30002-PB 61..309 40..298 303 33.3 Plus
CG9372-PA 408 CG9372-PA 164..403 30..291 299 33.7 Plus
CG33461-PB 287 CG33461-PB 6..287 1..299 296 30.3 Plus
CG31219-PB 345 CG31219-PB 70..339 22..290 296 30.2 Plus
CG16710-PB 372 CG16710-PB 88..363 23..291 296 32 Plus
CG1773-PA 317 CG1773-PA 62..309 41..298 295 33.1 Plus
Sp7-PF 391 CG3066-PF 112..389 16..294 294 32.1 Plus
Sp7-PE 391 CG3066-PE 112..389 16..294 294 32.1 Plus
Sp7-PA 391 CG3066-PA 112..389 16..294 294 32.1 Plus
CG5909-PA 381 CG5909-PA 128..381 39..295 293 29 Plus
CG18420-PA 299 CG18420-PA 27..264 26..290 281 32 Plus
CG11313-PD 370 CG11313-PD 116..368 41..294 279 33.9 Plus
CG9737-PA 424 CG9737-PA 127..418 15..302 279 29.3 Plus
MP1-PA 390 CG1102-PA 119..388 29..294 277 30.1 Plus
MP1-PC 399 CG1102-PC 128..397 29..294 277 30.1 Plus
MP1-PE 400 CG1102-PE 129..398 29..294 277 30.1 Plus
CG33465-PC 488 CG33465-PC 5..268 8..297 275 29.3 Plus
CG11313-PC 367 CG11313-PC 116..365 41..294 274 33.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22780-PA 412 GI22780-PA 125..411 19..295 383 33.8 Plus
Dmoj\GI23202-PA 376 GI23202-PA 118..371 41..294 354 32.4 Plus
Dmoj\GI22268-PA 380 GI22268-PA 128..379 41..294 335 33.3 Plus
Dmoj\GI24127-PA 389 GI24127-PA 116..387 20..294 320 35.2 Plus
Dmoj\GI24877-PA 392 GI24877-PA 128..391 41..295 319 31.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11857-PA 283 GL11857-PA 1..278 1..296 458 37.5 Plus
Dper\GL17488-PA 282 GL17488-PA 1..277 1..294 446 37 Plus
Dper\GL17487-PA 304 GL17487-PA 34..285 24..298 422 34.6 Plus
Dper\GL11858-PA 345 GL11858-PA 1..286 1..298 403 33.7 Plus
Dper\GL10743-PA 279 GL10743-PA 20..275 23..295 375 35.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15642-PA 283 GA15642-PA 1..278 1..296 456 37.5 Plus
Dpse\GA24176-PA 282 GA24176-PA 1..277 1..294 442 37 Plus
Dpse\GA24175-PB 304 GA24175-PB 34..285 24..298 429 35.3 Plus
Dpse\GA25145-PA 345 GA25145-PA 1..286 1..298 406 34.3 Plus
Dpse\GA24468-PA 278 GA24468-PA 21..274 23..295 388 36.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15551-PA 287 GM15551-PA 1..281 1..303 1030 66.8 Plus
Dsec\GM15716-PA 251 GM15716-PA 4..250 25..298 565 44.7 Plus
Dsec\GM22717-PA 299 GM22717-PA 1..294 1..294 493 39.8 Plus
Dsec\GM15712-PA 288 GM15712-PA 3..284 4..295 482 37.3 Plus
Dsec\GM15552-PA 269 GM15552-PA 40..268 41..298 471 40.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25193-PA 278 GD25193-PA 4..256 25..297 632 45.7 Plus
Dsim\GD25054-PA 158 GD25054-PA 1..140 1..163 554 67.5 Plus
Dsim\GD24450-PA 284 GD24450-PA 1..279 1..294 516 41.4 Plus
Dsim\GD12740-PA 296 GD12740-PA 4..278 3..295 472 38.2 Plus
Dsim\GD25055-PA 269 GD25055-PA 40..268 41..298 470 40.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21978-PA 296 GJ21978-PA 45..292 41..294 377 34.3 Plus
Dvir\GJ22783-PA 401 GJ22783-PA 113..400 18..295 376 34 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 20..265 43..294 353 34.2 Plus
Dvir\GJ22863-PA 372 GJ22863-PA 105..367 29..294 347 31.7 Plus
Dvir\GJ21214-PA 280 GJ21214-PA 32..277 43..294 338 34.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13188-PA 395 GK13188-PA 100..394 11..295 353 33 Plus
Dwil\GK11884-PA 375 GK11884-PA 117..370 41..294 352 31.4 Plus
Dwil\GK11130-PA 392 GK11130-PA 83..391 7..295 339 30.3 Plus
Dwil\GK22647-PA 279 GK22647-PA 28..277 41..294 322 34.8 Plus
Dwil\GK10951-PA 391 GK10951-PA 129..385 41..290 297 31.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11574-PA 456 GE11574-PA 2..280 1..301 800 53.9 Plus
Dyak\GE13708-PA 311 GE13708-PA 1..278 3..298 641 44.5 Plus
Dyak\GE13709-PA 276 GE13709-PA 1..275 1..301 606 43.3 Plus
Dyak\GE17361-PA 259 GE17361-PA 3..258 2..298 475 40.3 Plus
Dyak\GE13702-PA 297 GE13702-PA 1..277 1..296 443 36.1 Plus
Dyak\GE11574-PA 456 GE11574-PA 283..455 126..296 413 45.1 Plus

MIP11562.hyp Sequence

Translation from 129 to 1046

> MIP11562.hyp
MKFIAAGLALLVCSIQLGEGAPGHLLDSSCGTTKPEFIPMITGGADAGLF
SNPWMVKVLGEKLCGGSLITSRFVLTAAHCIVSTHMRVRLGEYKTRFPGK
DCSRCVPKSYKLRRIRLGEYDTRFPGKDCCVPKSYELAVDRKILHADYNL
NLDNDIGLLRMKSFVQYSDYVRPICLLVEGHMAESPIFNITGWGVTNDGT
PSRRLQRATVYNTDLHFCRSKFTKQVDESQICAAGTNSDACHGDSGGPLS
AQVPFAGSWLTFQYGLVSYGSAACHSFSVYTNVTHHRDWIVNAIEDFSRA
FQLRL*

MIP11562.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG30414-PC 305 CG30414-PC 1..305 1..305 1638 100 Plus
CG30414-PB 305 CG30414-PB 1..305 1..305 1638 100 Plus
CG30289-PA 316 CG30289-PA 1..278 1..297 656 46.2 Plus
CG30288-PC 282 CG30288-PC 24..282 23..302 559 44 Plus
CG33225-PB 292 CG33225-PB 11..278 8..294 490 39.5 Plus