Clone MIP13075 Report

Search the DGRC for MIP13075

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:130
Well:75
Vector:pOT2
Associated Gene/Transcriptgalectin-RB
Protein status:MIP13075.pep: gold
Sequenced Size:1708

Clone Sequence Records

MIP13075.complete Sequence

1708 bp assembled on 2011-03-16

GenBank Submission: BT126149.1

> MIP13075.complete
CGAAAAGGGAGACAATAATAACAGCTAAATATCTGGCAGCCAAACCATTT
TGTTAAATAACATTAAAATCCTTTGAGCTCCTGAAGGCTGAAAAGAACGT
TTTAGGGCAGAATATATTCATCAACAGCGAATTCTAAGGAACTAAAAGTA
TATTATTTACATGCGCAGTATTTAAGTTACAGTGACTTTTCGATTTTCAA
TGTGCGGTAGCGAGCAAGTACGATGTTGATTCATTCCTTAATGTCTAAAA
ACAAATACATTTCGATAAGCGATTCATAAAGAGTTCTGTGGTTAAAAAAG
TACATCCCTTGAATTAGACGAATATTTAATTTTTTAGTTCTGGCTATTCA
GATTTCCAAATCAGAACGTAAAATGTGTCTTAGGGTTTTGTATGAAAAAA
TGATGTGCTGTTGTCCCAAGCTGAAAAAGGGAGGTTTGAATGAGGCCTCA
TTTTACGAATATGCAGATGCTGTGCCAAAATATTTTAACGACCAAATAGG
GAAATTGAGCGAAGGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAA
ACTGCGAGAGGTTTTCCATCAATCTGGTTTATAACAATGACTCTCGAGAT
GTGGCGCTCCACATTAATCCACGGTTGCCACAAAACTATATTGTCCGCAA
CACCAAAGTACAGGACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGC
CGTTTCTACTAAGTCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACT
GAGGCATGCTATATGATATCGGTAAACGGACAACACTTTGCAGCGTACAC
TCATCGAATCCCTTATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATG
TAAGTAACGTGGAAATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGA
TTACCCCAGTCAGAGGCTAATAACATTGAGCTTCACATAGATGATGGGAT
TAATGAAATTGATGCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGT
GGTGCATTATTAGCGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGT
AACAATAGTTCGAATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATT
GCCACCAAATTCGTTGGTCGATGGTCGATGCTTGAAGATTGAAGGGAGAG
TGCGATTACTTCCCCACTCGTTTTATATAAACCTGCAACAGGGGCAGGAC
ATATGGCCACATCCAGTAATTGCATTCCACTTAAACCCACGTTTTTCGAA
AGCAAGCAGCGGCGCTATTGGAAAGGCGGTGGTGTGTAGGAATGCCTGGC
TTAATGGAGCTTGGGCACAAGAAGAGCGTTCGGAGTTTGACACAAACTTT
CGCCCTGGTCGGTCTTTTTGTTTAGCCATTGTTTGTACCAAAACATCCTT
TGAGGTGTATGTCAATCGGCAGTTTATGACTGATTTTAAATATAAGGTTA
GCCCTGAGGTGGTGGACACTGTCTACATACAAGGAGATGTTAAACTTTGG
AATGTAACGCTGGAAAAAAATCAGATGATTAAAGGCAAAAATATGCGAGT
CTATCAGAATCCGTGGTTCTTTAGTGAGTAGTAGCTGTTCATGTTTTTAT
TTTTTAGTAGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTA
TACAATATTTTTGTTAATAAATAAAATTATGGTAACGTCAAAAAAAAAAA
AAAAAAAA

MIP13075.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 75090..76220 559..1689 5655 100 Plus
chr2L 23010047 chr2L 74143..74587 1..445 2210 99.8 Plus
chr2L 23010047 chr2L 74915..75034 443..562 600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:30:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 75076..76207 559..1690 5660 100 Plus
2L 23513712 2L 74129..74573 1..445 2210 99.8 Plus
2L 23513712 2L 74901..75020 443..562 600 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 75076..76207 559..1690 5660 100 Plus
2L 23513712 2L 74129..74573 1..445 2210 99.7 Plus
2L 23513712 2L 74901..75020 443..562 600 100 Plus
Blast to na_te.dros performed on 2019-03-16 22:30:53 has no hits.

MIP13075.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:31:58 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 74917..75032 445..560 100 -> Plus
chr2L 74143..74586 1..444 99 -> Plus
chr2L 75092..76220 561..1689 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 09:37:40 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1209 373..1581 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:56:27 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1209 373..1581 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:28:44 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1209 373..1581 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 09:37:39 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1333 357..1689 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:56:27 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1689 1..1689 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:44 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 1..1689 1..1689 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:31:58 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
2L 74129..74572 1..444 99 -> Plus
2L 74903..75018 445..560 100 -> Plus
2L 75078..76206 561..1689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:31:58 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
2L 74129..74572 1..444 99 -> Plus
2L 74903..75018 445..560 100 -> Plus
2L 75078..76206 561..1689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:31:58 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
2L 74129..74572 1..444 99 -> Plus
2L 74903..75018 445..560 100 -> Plus
2L 75078..76206 561..1689 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:56:27 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 74129..74572 1..444 99 -> Plus
arm_2L 74903..75018 445..560 100 -> Plus
arm_2L 75078..76206 561..1689 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:02:00 Download gff for MIP13075.complete
Subject Subject Range Query Range Percent Splice Strand
2L 74129..74572 1..444 99 -> Plus
2L 74903..75018 445..560 100 -> Plus
2L 75078..76206 561..1689 100   Plus

MIP13075.hyp Sequence

Translation from 372 to 1580

> MIP13075.hyp
MCLRVLYEKMMCCCPKLKKGGLNEASFYEYADAVPKYFNDQIGKLSEGIS
FTVTGNLSVNCERFSINLVYNNDSRDVALHINPRLPQNYIVRNTKVQDIW
GNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRD
VRILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDASV
EETVKIPHEWCIISAPNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLVD
GRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAIG
KAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNRQ
FMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKNQMIKGKNMRVYQNPWFF
SE*

MIP13075.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
galectin-PB 402 CG11372-PB 1..402 1..402 2143 100 Plus
galectin-PD 401 CG11372-PD 1..401 10..402 2022 95.8 Plus
galectin-PE 419 CG11372-PE 41..419 24..402 2006 99.7 Plus
galectin-PA 503 CG11372-PA 125..503 24..402 2006 99.7 Plus
galectin-PF 272 CG11372-PF 1..272 131..402 1454 100 Plus

MIP13075.pep Sequence

Translation from 372 to 1580

> MIP13075.pep
MCLRVLYEKMMCCCPKLKKGGLNEASFYEYADAVPKYFNDQIGKLSEGIS
FTVTGNLSVNCERFSINLVYNNDSRDVALHINPRLPQNYIVRNTKVQDIW
GNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRD
VRILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDASV
EETVKIPHEWCIISAPNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLVD
GRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAIG
KAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNRQ
FMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKNQMIKGKNMRVYQNPWFF
SE*

MIP13075.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15050-PA 497 GF15050-PA 112..496 20..402 1621 74.8 Plus
Dana\GF15051-PA 389 GF15051-PA 33..367 48..383 655 38 Plus
Dana\GF11976-PA 321 GF11976-PA 14..159 41..184 152 28.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24692-PA 503 GG24692-PA 121..503 20..402 1914 92.4 Plus
Dere\GG13329-PA 1348 GG13329-PA 813..950 238..378 156 31.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11722-PA 495 GH11722-PA 117..494 25..402 1480 69 Plus
Dgri\GH11723-PA 386 GH11723-PA 44..374 48..385 672 39.4 Plus
Dgri\GH14254-PA 2613 GH14254-PA 225..380 22..177 450 50.6 Plus
Dgri\GH20302-PA 321 GH20302-PA 14..157 41..182 156 27.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
galectin-PB 402 CG11372-PB 1..402 1..402 2143 100 Plus
galectin-PD 401 CG11372-PD 1..401 10..402 2022 95.8 Plus
galectin-PE 419 CG11372-PE 41..419 24..402 2006 99.7 Plus
galectin-PA 503 CG11372-PA 125..503 24..402 2006 99.7 Plus
galectin-PF 272 CG11372-PF 1..272 131..402 1454 100 Plus
CG11374-PC 401 CG11374-PC 44..381 48..392 640 39.6 Plus
Pex23-PA 1350 CG32226-PA 815..952 238..378 165 32.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16246-PA 488 GI16246-PA 111..482 25..397 1449 67.6 Plus
Dmoj\GI23146-PA 672 GI23146-PA 373..654 42..375 331 29.8 Plus
Dmoj\GI23146-PA 672 GI23146-PA 526..670 37..181 279 38.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16594-PA 503 GL16594-PA 126..502 25..402 1659 78 Plus
Dper\GL25042-PA 1348 GL25042-PA 814..951 238..378 158 31.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10954-PB 503 GA10954-PB 126..502 25..402 1659 78 Plus
Dpse\GA10955-PB 392 GA10955-PB 44..380 48..385 696 39.5 Plus
Dpse\GA16767-PA 1348 GA16767-PA 814..951 238..378 158 31.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16712-PA 503 GM16712-PA 121..503 20..402 1960 94.8 Plus
Dsec\GM22231-PA 1348 GM22231-PA 813..950 238..378 165 33.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22998-PA 503 GD22998-PA 121..503 20..402 1956 94.8 Plus
Dsim\GD12202-PA 1350 GD12202-PA 815..952 238..378 165 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16209-PA 489 GJ16209-PA 111..488 25..402 1506 70.1 Plus
Dvir\GJ16210-PA 390 GJ16210-PA 22..379 27..385 688 40.1 Plus
Dvir\GJ10448-PA 665 GJ10448-PA 355..652 33..385 402 30.3 Plus
Dvir\GJ10448-PA 665 GJ10448-PA 518..663 37..181 348 42.6 Plus
Dvir\GJ13532-PA 1349 GJ13532-PA 815..960 238..386 166 31.4 Plus
Dvir\GJ21223-PA 321 GJ21223-PA 14..140 41..164 152 28 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21075-PA 513 GK21075-PA 126..512 25..402 1471 69.5 Plus
Dwil\GK18874-PA 427 GK18874-PA 44..392 48..390 658 38.2 Plus
Dwil\GK17237-PA 1357 GK17237-PA 855..960 254..378 157 32.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16549-PA 502 GE16549-PA 124..502 24..402 1911 93.1 Plus
Dyak\GE22947-PA 1286 GE22947-PA 425..562 238..378 163 32.4 Plus
Dyak\GE22418-PA 1348 GE22418-PA 813..950 238..378 160 32.4 Plus