BDGP Sequence Production Resources |
Search the DGRC for MIP13239
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 132 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | Dhap-at-RA |
Protein status: | MIP13239.pep: gold |
Sequenced Size: | 3530 |
3530 bp assembled on 2009-10-01
GenBank Submission: BT099931.1
> MIP13239.complete CGGAGGAACCCCAATGCGGCGCTCGCACCGTGCAGAGGCCGCCGCGCAGC CACCCAGCCGTCAAATTGCCGAATATCGATTCGCAGCTGCTGCAGATGTT TTTTGGTCAACAAAACAAAACAGCCGCCGCTTCGCCGCCGAGCAAGCAAA TATACAAAAATACGAAAATACCAAAATACAAGAAAGTCGGTCAGGGAGAA CCGAAATAAGTCGCGAATTGTGAATTAAATGCGCTAAAATTGCGGTAGCC CAGTGCAGTGCGGAAATAGAGGCATTCCAACTTGCAGCAAAGAGCAGCTC ATATTGAAAATATATATATTTTTTTTTTTTGGAGACCAGTTTGAAGCGCA GCGCGATGGATAGAAATCCCGTGAGGCAGTCGACGTCATCCGGCACCGTA GAAGGTGAATCCAGCGAACAGGAGGAGCAGAAGACGCCCAGTGCGGCCGA ATATATGAGGAACTTCAAGAACATCATAGCGCCGGGCAACGAGGCCTCCA TGACCAGGGAGTTCAATCCGCAGGTGGCATACGAATTCGAAAAGTATCTC AATCCGCAAAAGCTCAAGCAGCACGTCCTTAGGAGCGAGAAGCTGCGATC CATTCTGGAGCACTATGCCAAGGAGTCGGGCACGCCGCTCAAGCAGATGG AGCGTCAGGCCCGGGCGATCATTGATGAAATCGGCCTCGATCGGAATATG GCCATCATCCGGTGGTGCGGCATTGCCATTACGGCGATCGGCAAGCGGAT CTGCGATGGATTCTATGTCAATTCGGCTAGCATGGCCAATGTGCGCAAGG ATATGGGCAAGTGCCCGGTGCTCTATCTGCCAAGTCATCGCAGCTACATG GACTTCATCCTGATGTCCTACATCTGCTATTACTACGACATCGAGATACC AGGAATAGCAGCCGGCATGGATTTCCACTCCATGTTCGGAATGGGCACCA TGTTGAGGAAAACAGGAGCGTTCTTCATGCGCCGCAGCTTCTCCAACGAT GAGCTATACTGGGATATTTTCCGGGAGTATATGTACGCGCTGGTGGCAAA CTACCACATCGGCGTGGAGTTCTTCATTGAGGGCACGCGCTCCAGGAATT TCAAAGCTCTGGTTCCCAAAATTGGACTACTCTCGATGGCTCTGTTGCCA TATTTCACGGGCGAAGTGCCGGATGTGATGATTGTGCCAGTGAGTGTGGC CTACGAACGCGTCCTGGAGGAGCAACTGTTCGTCTATGAGCTGCTGGGTG TGCCCAAGCCCAAGGAGTCGACAAAGGGCTTTTTCAAGGCCCTAAAAATC ATCGACGAGCGATTTGGCAAGATGTTCCTCGACTTCGGAGAGCCCATCTC GGTCAAGGAGTTTTTCGGACACGACAGCGCGCAGCGAATGCAGCGAGCAG GCGTGGGTGGTCACTTGCAGAAGCTGAACCGCCAGGAGGTGGAACTAGTC AAACAGCTGGCCAATGAGATTATCTACCAGCAGCAGCGTCGCATTGTGAT CTCCACGTTCAATCTGCTTAGCCTCTACTACGCCAGTCAATTGTATGCCC AAAGGAGTGTCACTCTGGACGAGCTAGCACGAGGTGTTCTGCATCTGAAG CGAATCTTCGAGCAGCTGGGCGCCCATGTTAGCACGACTCCGAGCAGCAT TAAGGCGGATGTGATTGATGCTGTGGAGATACACTCGAATATTTTACATT TCGCGACTGGCCGCCTGCAGTTTACGCCCATGGCAGCCAAGCAACTGGCG GAGCAGATCGATGTTAAGCGCCTGAAAGCCCATGCCCTGTGTCCACAGAC CATGGCGGTGGCTGTGCCCATGCTGGCACTGCAGCTCTACATTAATCCCT GCATGTTCTGGCTGGCCAGACCCGCCTACCTGCTGCTGGCAGCGCTCAAG GAGCAAAAGAATCAACAGAAGCAATCGACGGACATCTCGTACGATGCCAG TTTGTGTGCCCTGCATGCGCACGTGACCACCATGGACGCGCTATTCCAGC ACGAGTTCATCATTGAATCGAATCGCGAGGCGGCCGAGTTTGAGACGCAT CTGCAGCTGCTGCTGGACGAACGAGTTGTGGAGGTAGAGACCAGTGGCCG GATCAATGTGCAGGACAATGAATGCTCGCATGTCATTCTGGCCGCCCTGG CGCCATTCCTCTGCCTCTACTACCAACTGGTGGTCACGTTAAGAAAGATC CCTTTGGAGCTGGAGTTCAGTAACAAGGAGCTGCTCGTGCGCGTCCAGCA GCATGTGGAGCAGCTCCTACAGCAACCCGGAGCCTCCGCCTCTCATGTGC ACCCATATTGCCTGGCCCTGGACAATCTGAACATTGCCATCTATGCGCTA ATCCAGAGGGGCTACCTAGTGAAGAGCAGGGACTCTGGTCAGATGAAGAT CGCGTCCACTCCGGGAAAGTGCCTGCGAGAACTGGAAACGCAGCTTCTCG AGTACTGTCAACTAATGCCATTTGCTCAATACTCGACGGCGGCCAACCAG CAGGCCCAGTTCCACATAGCCAAGTTATAACTGGCAAACGGAAATGGGCC GGCGAGGGAGGCGACAAGGGAGAGGGACACCGATTCGAGTACCGATACCC AGTCGGGTCCCAATCAGTGTAGTACAATTACCATTTCATTGCCCATGCAG TTCATCCAGTTTGTTGTCGGCCTGCTCAAGAATTGTCGCATCATCTGCAT ACTTTTCATCATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGA TCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTGTCTGGTTAG GATGGGTCGATACTAATAGTATCCTATTTATATTGGCATAATTAACATTC CCTATTTTCCACCTGCCATTTAAGAGTTTTTGATAATGTACATAGCGACA CCCATTTGTTAGGAAGACAAAAGAGCTATGCTAGAATAAGATTGAACTAC AATTTTGTGACTAGCGAAATCGATCCATCCTTGAGTGTTAGTGTATCCGA GTGCATAGAGAATCTTATAGTCTAACAACTGATATTTTATGTCCAGTTCG TTATGAAGCAAATGAAATTCACGAAACCGCCAAAAACATACACTTGCAAA AAAGTGGATTTTTCATTCAAAAATGTTGTATAGACAAGCCGGTTAGTGTT AGATCCCATCGAAATATATATCACATATATTTTTAGCCGAGGAATTCATA GAAATGTTGCCAACAAAATGTAACATTGAAAGCACATTCACTTTTTTTAA CGAAAATAGTTTAGCACAATTTTTAAGTCAATTTTCACACGCATAAATGG GTTTTTAATTTGTACACTAGAGTGTTGAACGCATTTTTGTTTAATTTTAA GTTACTTTAGGTTTAAGCTGGTGTTAAGTTTGTTTCAGTTTCTGTATTTT AAGTTGTTTATGCTCATCAACCCTGCATTATTTTTAAATATTCCATTGTG CCAATAGAGAAGTCAGCACCACACAAAGAAAAATAAATAAAAAAAACTTG CCCTAGTTATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhap-at.a | 3245 | Dhap-at.a | 66..3244 | 337..3515 | 15880 | 99.9 | Plus |
Dhap-at.b | 3441 | Dhap-at.b | 262..3440 | 337..3515 | 15880 | 99.9 | Plus |
Dhap-at-RA | 3278 | Dhap-at-RA | 103..3277 | 341..3515 | 15860 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21308750..21310066 | 3512..2196 | 6555 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 21310123..21311400 | 2197..920 | 6345 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 21311652..21312231 | 920..341 | 2900 | 100 | Minus |
chr3R | 27901430 | chr3R | 21313725..21314064 | 340..1 | 1700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25485613..25486938 | 3521..2196 | 6600 | 99.8 | Minus |
3R | 32079331 | 3R | 25486995..25488272 | 2197..920 | 6390 | 100 | Minus |
3R | 32079331 | 3R | 25488524..25489103 | 920..341 | 2900 | 100 | Minus |
3R | 32079331 | 3R | 25490597..25490936 | 340..1 | 1700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25226444..25227769 | 3521..2196 | 6600 | 99.8 | Minus |
3R | 31820162 | 3R | 25227826..25229103 | 2197..920 | 6390 | 100 | Minus |
3R | 31820162 | 3R | 25229355..25229934 | 920..341 | 2900 | 100 | Minus |
3R | 31820162 | 3R | 25231428..25231767 | 340..1 | 1700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 1881..2037 | 3280..3430 | 122 | 57.9 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1688..1715 | 335..308 | 122 | 92.9 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9570..9597 | 335..308 | 122 | 92.9 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6897..6922 | 301..326 | 121 | 96.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21308750..21310064 | 2198..3512 | 99 | <- | Minus |
chr3R | 21310123..21311399 | 921..2197 | 99 | <- | Minus |
chr3R | 21311652..21312255 | 320..920 | 98 | -> | Minus |
chr3R | 21312442..21312457 | 304..319 | 93 | <- | Minus |
chr3R | 21313762..21314064 | 1..303 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..2175 | 356..2530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..2175 | 356..2530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RC | 1..2424 | 356..2779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RC | 1..2424 | 356..2779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..3157 | 356..3512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..3157 | 356..3512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..3512 | 1..3512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dhap-at-RA | 1..3512 | 1..3512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25485622..25486936 | 2198..3512 | 99 | <- | Minus |
3R | 25486995..25488271 | 921..2197 | 100 | <- | Minus |
3R | 25488524..25489103 | 341..920 | 100 | <- | Minus |
3R | 25490597..25490936 | 1..340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25485622..25486936 | 2198..3512 | 99 | <- | Minus |
3R | 25486995..25488271 | 921..2197 | 100 | <- | Minus |
3R | 25488524..25489103 | 341..920 | 100 | <- | Minus |
3R | 25490597..25490936 | 1..340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25485622..25486936 | 2198..3512 | 99 | <- | Minus |
3R | 25486995..25488271 | 921..2197 | 100 | <- | Minus |
3R | 25488524..25489103 | 341..920 | 100 | <- | Minus |
3R | 25490597..25490936 | 1..340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21311344..21312658 | 2198..3512 | 99 | <- | Minus |
arm_3R | 21312717..21313993 | 921..2197 | 100 | <- | Minus |
arm_3R | 21314246..21314825 | 341..920 | 100 | <- | Minus |
arm_3R | 21316319..21316658 | 1..340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25226453..25227767 | 2198..3512 | 99 | <- | Minus |
3R | 25227826..25229102 | 921..2197 | 100 | <- | Minus |
3R | 25229355..25229934 | 341..920 | 100 | <- | Minus |
3R | 25231428..25231767 | 1..340 | 100 | Minus |
Translation from 355 to 2529
> MIP13239.pep MDRNPVRQSTSSGTVEGESSEQEEQKTPSAAEYMRNFKNIIAPGNEASMT REFNPQVAYEFEKYLNPQKLKQHVLRSEKLRSILEHYAKESGTPLKQMER QARAIIDEIGLDRNMAIIRWCGIAITAIGKRICDGFYVNSASMANVRKDM GKCPVLYLPSHRSYMDFILMSYICYYYDIEIPGIAAGMDFHSMFGMGTML RKTGAFFMRRSFSNDELYWDIFREYMYALVANYHIGVEFFIEGTRSRNFK ALVPKIGLLSMALLPYFTGEVPDVMIVPVSVAYERVLEEQLFVYELLGVP KPKESTKGFFKALKIIDERFGKMFLDFGEPISVKEFFGHDSAQRMQRAGV GGHLQKLNRQEVELVKQLANEIIYQQQRRIVISTFNLLSLYYASQLYAQR SVTLDELARGVLHLKRIFEQLGAHVSTTPSSIKADVIDAVEIHSNILHFA TGRLQFTPMAAKQLAEQIDVKRLKAHALCPQTMAVAVPMLALQLYINPCM FWLARPAYLLLAALKEQKNQQKQSTDISYDASLCALHAHVTTMDALFQHE FIIESNREAAEFETHLQLLLDERVVEVETSGRINVQDNECSHVILAALAP FLCLYYQLVVTLRKIPLELEFSNKELLVRVQQHVEQLLQQPGASASHVHP YCLALDNLNIAIYALIQRGYLVKSRDSGQMKIASTPGKCLRELETQLLEY CQLMPFAQYSTAANQQAQFHIAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17273-PA | 722 | GF17273-PA | 1..722 | 1..724 | 3370 | 87 | Plus |
Dana\GF18869-PA | 853 | GF18869-PA | 193..442 | 93..336 | 326 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12243-PA | 715 | GG12243-PA | 1..715 | 1..724 | 3747 | 96.3 | Plus |
Dere\GG11581-PA | 852 | GG11581-PA | 196..443 | 95..336 | 320 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18612-PA | 716 | GH18612-PA | 3..716 | 12..724 | 2975 | 81.4 | Plus |
Dgri\GH18409-PA | 860 | GH18409-PA | 192..495 | 95..413 | 317 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhap-at-PC | 807 | CG4625-PC | 1..724 | 1..724 | 3708 | 100 | Plus |
Dhap-at-PB | 724 | CG4625-PB | 1..724 | 1..724 | 3708 | 100 | Plus |
Dhap-at-PA | 724 | CG4625-PA | 1..724 | 1..724 | 3708 | 100 | Plus |
mino-PB | 757 | CG5508-PB | 101..404 | 95..412 | 297 | 27.6 | Plus |
mino-PC | 786 | CG5508-PC | 130..433 | 95..412 | 297 | 27.6 | Plus |
mino-PE | 850 | CG5508-PE | 194..497 | 95..412 | 297 | 27.6 | Plus |
mino-PA | 850 | CG5508-PA | 194..497 | 95..412 | 297 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10360-PA | 725 | GI10360-PA | 34..725 | 33..724 | 3159 | 84.6 | Plus |
Dmoj\GI24312-PA | 860 | GI24312-PA | 190..437 | 95..336 | 326 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21684-PA | 630 | GL21684-PA | 1..630 | 98..724 | 3027 | 87.1 | Plus |
Dper\GL23642-PA | 872 | GL23642-PA | 212..459 | 95..336 | 329 | 31.5 | Plus |
Dper\GL21683-PA | 93 | GL21683-PA | 46..91 | 30..75 | 217 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18312-PA | 743 | GA18312-PA | 46..743 | 30..724 | 3338 | 86.8 | Plus |
Dpse\GA18937-PB | 850 | GA18937-PB | 190..437 | 95..336 | 332 | 31.5 | Plus |
Dpse\GA18937-PD | 758 | GA18937-PD | 98..345 | 95..336 | 331 | 31.5 | Plus |
Dpse\GA18937-PC | 787 | GA18937-PC | 127..374 | 95..336 | 330 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10240-PA | 723 | GM10240-PA | 1..723 | 1..724 | 3802 | 97.5 | Plus |
Dsec\GM16363-PA | 849 | GM16363-PA | 194..441 | 95..336 | 314 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18193-PA | 723 | GD18193-PA | 1..723 | 1..724 | 3820 | 98.1 | Plus |
Dsim\GD21357-PA | 850 | GD21357-PA | 194..441 | 95..336 | 321 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10212-PA | 719 | GJ10212-PA | 24..719 | 29..724 | 3213 | 86.4 | Plus |
Dvir\GJ10396-PA | 859 | GJ10396-PA | 191..438 | 95..336 | 325 | 32.7 | Plus |
Translation from 355 to 2529
> MIP13239.hyp MDRNPVRQSTSSGTVEGESSEQEEQKTPSAAEYMRNFKNIIAPGNEASMT REFNPQVAYEFEKYLNPQKLKQHVLRSEKLRSILEHYAKESGTPLKQMER QARAIIDEIGLDRNMAIIRWCGIAITAIGKRICDGFYVNSASMANVRKDM GKCPVLYLPSHRSYMDFILMSYICYYYDIEIPGIAAGMDFHSMFGMGTML RKTGAFFMRRSFSNDELYWDIFREYMYALVANYHIGVEFFIEGTRSRNFK ALVPKIGLLSMALLPYFTGEVPDVMIVPVSVAYERVLEEQLFVYELLGVP KPKESTKGFFKALKIIDERFGKMFLDFGEPISVKEFFGHDSAQRMQRAGV GGHLQKLNRQEVELVKQLANEIIYQQQRRIVISTFNLLSLYYASQLYAQR SVTLDELARGVLHLKRIFEQLGAHVSTTPSSIKADVIDAVEIHSNILHFA TGRLQFTPMAAKQLAEQIDVKRLKAHALCPQTMAVAVPMLALQLYINPCM FWLARPAYLLLAALKEQKNQQKQSTDISYDASLCALHAHVTTMDALFQHE FIIESNREAAEFETHLQLLLDERVVEVETSGRINVQDNECSHVILAALAP FLCLYYQLVVTLRKIPLELEFSNKELLVRVQQHVEQLLQQPGASASHVHP YCLALDNLNIAIYALIQRGYLVKSRDSGQMKIASTPGKCLRELETQLLEY CQLMPFAQYSTAANQQAQFHIAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhap-at-PC | 807 | CG4625-PC | 1..724 | 1..724 | 3708 | 100 | Plus |
Dhap-at-PB | 724 | CG4625-PB | 1..724 | 1..724 | 3708 | 100 | Plus |
Dhap-at-PA | 724 | CG4625-PA | 1..724 | 1..724 | 3708 | 100 | Plus |
mino-PB | 757 | CG5508-PB | 101..404 | 95..412 | 297 | 27.6 | Plus |
mino-PC | 786 | CG5508-PC | 130..433 | 95..412 | 297 | 27.6 | Plus |