Clone MIP13654 Report

Search the DGRC for MIP13654

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:136
Well:54
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14797-RC
Protein status:MIP13654.pep: gold
Sequenced Size:3169

Clone Sequence Records

MIP13654.complete Sequence

3169 bp assembled on 2009-11-01

GenBank Submission: BT100190.1

> MIP13654.complete
GACAAACCGTTTGAGCGTCACCAGTGTGCCGGTCAGCTTCTTGCAGCGAC
GTAGCGCCGACTCCAAACGGTCGGGCTCTTCTTTGAGGAACTTTTCTTCT
CGCACCACTTTCTCCATCTCGTTAGACAGGATGCAGCGCAAGCCATTCGA
CAGGGATGGGAACTTTAGCTTCAGCTCGGCGACGGTTTTGCTAAAAAGGA
ACTTGTTTATTGTTCGATCCTGGGTCATATTCGACCACTCACCTTGCCCG
GCTCAGCACCAGAGCCATGTCTTCCACGGCCGTCATGTTGACGCGTGTTC
GCCGGTTAATGACCTCGCCGCGCAGGTTCTCAACAGACCCCTCCAGGTCG
CTGAGGTCCTTCTCCAGGCGGATTACTTCTTGCTTGTAGAGCTCCTCCTC
CCGCGAAATGCGTGTGGCGTCCTGGTCGCCCTGGTGATCCCAGAAGCTGC
CGCTGCTCGCCAGCAGAGTAGCGCGAATCCGCATGAAGGTTCCCTTGATG
TCTTCGCGCACGGCAACAGCCTGGGCCTGCGAGAGGCGCCTCAGGGTGCG
CACCTCCATGCGCAGGTCCTTGGCCTTCTTCTGCAGGCCGCGCAAATGGT
TGTACACCTCAGGAGCCAGGGCAATGTCCGCCCGGTAGTTGGGATGAGCG
GTCTGGGCTAGCACGATCGGCTTGGGGGGCGGAGGAGGCTTTAGTCGGTC
ACGCTCTGTGGAGGGAGGGAAGATGGTCAGGAGAGCACTCGGCGAATTGG
GGAACTTGTTAATGGACAAATGTGGCTGATGCAGGCGTGCCGTGTTCTTA
CCTTGGGACGAGGTGCGTGGAAGAGTGGACGACTTGATTGCCGGCTTGGT
TGGCTTCGTTTCGGCTGTAAAGACCACGCCCATTTCGGAGGCAGTGAGTT
GCAGTGGTGAGAAAGGGAAACGAATGGCTTGCATTGTGTCTAGGAAGCGT
TTCACCCACACCAATCAACCGCACTCAGAATAAAATTCGCTCTAACTTTA
ATAATCGCCACGGTTTATTATCACTTTTTTTTTGTAAATTTTCTTTCTTT
CTAGTATGCTCGTCCATGGGATTATCTCAGTTTTTGATTGATTTTTATTC
TGAGTGCAAGGCTGTACATATAAATAAATTACCGGCATGTAGGGGATTGT
GAGACTTTGGTATTCCCTGTATGTCATCGCTAAATGACACGGACTTCTCA
AAGGACACGGATTTTTCTGCAAGACAAGGACAAGACAATATGTGACGGCT
TTTCAGAGGCTGCAAAGGATTGGGCCTCCGGTTCCGGCGACACTTACGGC
ACGAGTTTTTGCCCAGCTTGGGAGCTTTCTCCCGAATGTACAGCTCATCC
CCGGAGCCGTTGGCTGCGCGGCGTGCGGAAGAGAGAACAAATTAGACATG
TAGTTAGAGGGGAGAGACCGGGTGCAAGGAGTCTGGAAGTTGGGCCATGT
CTTTAGATCTACAAAGCGGTGCTACAAGCCAAGCGAGTGCCGTGGACAAC
ATTCAGGGATTGCAGGGACTCATATTCGTACCTTGCATCTGCGACGGCAC
GACCAGATAGTTTGGGTCCAGAGTGGACACGGCCAGCGGGGCAATCTGGG
GGTTCTGGTTAACGAGGGCCTTCTGCACTAGTCCCGTCAGGTTGGCCAGC
TGCCTTTCCATGTGCTCCACACGAATCCGATGCAAGTCTTCGGGCCTGCA
AGTGTTGCGTGCTTGGCAAGCAGCGATCATTGGGCCACACATCCGCTGGC
ACCACATCGCTCCAATTGCGCAGCCAAGCCTAGGCATCCGACATCAGAGC
ATAGACACCGGAATTGGATTTGGTATCCAAGTCGAAGTCGAAGTCGAAAC
GCGGGTCGCAGCACTTAGCGCATGGGAGCGTGAACCAAAACAGCAAGAAT
GCAGCTGCATGACTGCATAAGCTGCTATTCGACTTCTTTATACCCTAACC
TGCGCTGCGCTGTGCTGTCAGGCCGCTCATCTGGTCCAATATACCCTCCG
TCTCGTTTGGCCGTTGGAGGCAGCGAAAAGTAAGTCCGTGCTAGCACGCA
ATGTCGGTGCCAATCCGCTTTCGCAGTCGACGAGTTGGAGCTGCGCAAGA
ACCACCAAGAGCTGCCCGCAAAGACATGACTACATGCAGTGTGACCAGCA
CACCAGCGCGGTTTGCCCGCTGCCTGGCTAACTTCCAGGTGGACGAGCTG
CTGCTGTTAAAGAAGTCCGTGATGAGTATGGAGGCGCTGGATAAGAACGA
TAGTCTCCAGCCGACTACGGAATGCCCACAGATGGCGCCGGATGGATCGC
CACTGCCAGAGCGAATGGCCTTGATGGCCGCAGATCGGGGTGAGCACGAC
ACCACTGGCTCCCATGGTCCCTGGCACTCCCATCCACACGCGCCGACTTC
CTGGACCGAGGAAAAGCCCTCAAAGTTGCAGACCCTATTCCAGATCAGCA
TTACGGCCCTGGCCTTTCTCTCCTTCGGCGGCTATCTACTCTGCCTAATC
GTGCAGGCCATCAAGAGCAAGGGCACCACCTACTTCCATCCGGTGGCCAC
GGCCACGACCAGCTCATCCACAAGCAATGTGAAACGCATCAAGATATACC
GCCGCAGCAAGCGCAGCTCTGTGCGCCCCGATACCGATCTGCCAACCCTG
CTGCAGCAGGACTACGCCTCCTACATGAAATCTTTGCGAGATCGCGGCTG
GGGCATGCTTACCTAGTGGGATCGTAGATCTGGTTGCCGCGATGCGTGAG
GCGGTTGGGTCCTGGTCCCACCTTTATGCCGTACAGTGCGTACTGATCCT
CTGTCATGGTTCCATCGCTGTAAATGGCAAAGATTAGTTAAGATGCTAAT
GCTACTACAACAACATCTATTCCTACTCCCCCCCTCGCACCTCTGCTCCT
CGTCGATAATGGGCGCCACCACGGCGCCCCTCGTTCCGTACTGGCTGTAG
TATGGCTCCTCGTAGTTTCCGCGGCTACTGCGCTCCGGGGAACTGGTATA
TCCATCTGCAAATACAGCCTGGTCGTTTAGAACTTGGACTCTTAATGATG
GGAGGATCGTAGCTATGTGCGTGCTTGGTAGCCTATAGTTTGTGGTTCAA
TTTAGGTATAACGAAACGCAATAAAGGAACGCAAACGAGCAATTCGAAAT
GAAAAAAAAAAAAAAAAAA

MIP13654.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32809.c 2804 CG32809.c 1981..2445 707..243 2325 100 Minus
CG32809-RB 2636 CG32809-RB 1813..2277 707..243 2325 100 Minus
CG32809.b 3061 CG32809.b 1981..2445 707..243 2325 100 Minus
CG32809.c 2804 CG32809.c 2444..2628 192..8 925 100 Minus
CG32809-RB 2636 CG32809-RB 2276..2460 192..8 925 100 Minus
CG32809.b 3061 CG32809.b 2444..2628 192..8 925 100 Minus
CG32809.c 2804 CG32809.c 1604..1769 1697..1532 815 99.3 Minus
CG32809-RB 2636 CG32809-RB 1436..1601 1697..1532 815 99.3 Minus
CG32809.b 3061 CG32809.b 1604..1769 1697..1532 815 99.3 Minus
CG32809.c 2804 CG32809.c 1385..1500 3006..2891 580 100 Minus
CG32809-RB 2636 CG32809-RB 1217..1332 3006..2891 580 100 Minus
CG32809.b 3061 CG32809.b 1385..1500 3006..2891 580 100 Minus
CG32809.c 2804 CG32809.c 1499..1606 2819..2712 540 100 Minus
CG32809-RB 2636 CG32809-RB 1331..1438 2819..2712 540 100 Minus
CG32809.b 3061 CG32809.b 1499..1606 2819..2712 540 100 Minus
CG32809.c 2804 CG32809.c 1836..1919 1216..1133 420 100 Minus
CG32809-RB 2636 CG32809-RB 1668..1751 1216..1133 420 100 Minus
CG32809.b 3061 CG32809.b 1836..1919 1216..1133 420 100 Minus
CG32809.c 2804 CG32809.c 1768..1835 1365..1298 340 100 Minus
CG32809-RB 2636 CG32809-RB 1600..1667 1365..1298 340 100 Minus
CG32809.b 3061 CG32809.b 1768..1835 1365..1298 340 100 Minus
CG32809.c 2804 CG32809.c 1919..1982 865..802 320 100 Minus
CG32809-RB 2636 CG32809-RB 1751..1814 865..802 320 100 Minus
CG32809.b 3061 CG32809.b 1919..1982 865..802 320 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:38:32
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1575412..1577115 1..1704 8505 99.9 Plus
chrX 22417052 chrX 1577923..1578737 2337..3151 4030 99.6 Plus
chrX 22417052 chrX 1577167..1577606 1702..2141 2155 99.3 Plus
chrX 22417052 chrX 1577674..1577871 2141..2338 990 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:14:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1681566..1683269 1..1704 8505 99.9 Plus
X 23542271 X 1684077..1684893 2337..3153 4085 100 Plus
X 23542271 X 1683321..1683760 1702..2141 2200 100 Plus
X 23542271 X 1683828..1684025 2141..2338 990 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1689664..1691367 1..1704 8505 99.9 Plus
X 23527363 X 1692175..1692991 2337..3153 4085 100 Plus
X 23527363 X 1691419..1691858 1702..2141 2200 100 Plus
X 23527363 X 1691926..1692123 2141..2338 990 100 Plus
Blast to na_te.dros performed on 2019-03-16 21:38:31 has no hits.

MIP13654.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:39:46 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1575412..1577112 1..1701 99 -> Plus
chrX 1577167..1577606 1702..2141 99 -> Plus
chrX 1577675..1577870 2142..2337 100 -> Plus
chrX 1577924..1578737 2338..3151 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-01 09:32:56 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RB 1..591 2126..2716 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:15:03 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RB 1..591 2126..2716 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:58:59 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RC 1..666 2051..2716 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:37 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RC 1..666 2051..2716 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-01 09:32:56 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RB 1..591 2126..2716 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:15:03 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RB 1..591 2126..2716 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:59 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RC 1..3151 1..3151 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:37 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
CG14797-RC 1..3151 1..3151 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
X 1681566..1683266 1..1701 99 -> Plus
X 1683321..1683760 1702..2141 100 -> Plus
X 1683829..1684024 2142..2337 100 -> Plus
X 1684078..1684891 2338..3151 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
X 1681566..1683266 1..1701 99 -> Plus
X 1683321..1683760 1702..2141 100 -> Plus
X 1683829..1684024 2142..2337 100 -> Plus
X 1684078..1684891 2338..3151 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
X 1681566..1683266 1..1701 99 -> Plus
X 1683321..1683760 1702..2141 100 -> Plus
X 1683829..1684024 2142..2337 100 -> Plus
X 1684078..1684891 2338..3151 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:59 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1575599..1577299 1..1701 99 -> Plus
arm_X 1577354..1577793 1702..2141 100 -> Plus
arm_X 1577862..1578057 2142..2337 100 -> Plus
arm_X 1578111..1578924 2338..3151 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:05:13 Download gff for MIP13654.complete
Subject Subject Range Query Range Percent Splice Strand
X 1689664..1691364 1..1701 99 -> Plus
X 1691419..1691858 1702..2141 100 -> Plus
X 1691927..1692122 2142..2337 100 -> Plus
X 1692176..1692989 2338..3151 100   Plus

MIP13654.hyp Sequence

Translation from 2050 to 2715

> MIP13654.hyp
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLT*

MIP13654.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14797-PC 221 CG14797-PC 1..221 1..221 1150 100 Plus
CG14797-PB 196 CG14797-PB 1..196 26..221 1025 100 Plus

MIP13654.pep Sequence

Translation from 2050 to 2715

> MIP13654.pep
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLT*

MIP13654.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22168-PA 172 GF22168-PA 41..169 85..215 448 67.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12874-PA 175 GG12874-PA 1..175 47..221 783 88.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24533-PA 154 GH24533-PA 17..142 81..213 402 66.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14797-PC 221 CG14797-PC 1..221 1..221 1150 100 Plus
CG14797-PB 196 CG14797-PB 1..196 26..221 1025 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16498-PA 201 GI16498-PA 1..190 26..215 480 58.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13254-PA 236 GA13254-PA 35..236 31..221 663 64.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19160-PA 219 GM19160-PA 1..219 1..221 884 80.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24722-PA 221 GD24722-PA 1..221 1..221 1142 96.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16704-PA 224 GE16704-PA 1..224 3..221 900 85.3 Plus