MIP13654.complete Sequence
3169 bp assembled on 2009-11-01
GenBank Submission: BT100190.1
> MIP13654.complete
GACAAACCGTTTGAGCGTCACCAGTGTGCCGGTCAGCTTCTTGCAGCGAC
GTAGCGCCGACTCCAAACGGTCGGGCTCTTCTTTGAGGAACTTTTCTTCT
CGCACCACTTTCTCCATCTCGTTAGACAGGATGCAGCGCAAGCCATTCGA
CAGGGATGGGAACTTTAGCTTCAGCTCGGCGACGGTTTTGCTAAAAAGGA
ACTTGTTTATTGTTCGATCCTGGGTCATATTCGACCACTCACCTTGCCCG
GCTCAGCACCAGAGCCATGTCTTCCACGGCCGTCATGTTGACGCGTGTTC
GCCGGTTAATGACCTCGCCGCGCAGGTTCTCAACAGACCCCTCCAGGTCG
CTGAGGTCCTTCTCCAGGCGGATTACTTCTTGCTTGTAGAGCTCCTCCTC
CCGCGAAATGCGTGTGGCGTCCTGGTCGCCCTGGTGATCCCAGAAGCTGC
CGCTGCTCGCCAGCAGAGTAGCGCGAATCCGCATGAAGGTTCCCTTGATG
TCTTCGCGCACGGCAACAGCCTGGGCCTGCGAGAGGCGCCTCAGGGTGCG
CACCTCCATGCGCAGGTCCTTGGCCTTCTTCTGCAGGCCGCGCAAATGGT
TGTACACCTCAGGAGCCAGGGCAATGTCCGCCCGGTAGTTGGGATGAGCG
GTCTGGGCTAGCACGATCGGCTTGGGGGGCGGAGGAGGCTTTAGTCGGTC
ACGCTCTGTGGAGGGAGGGAAGATGGTCAGGAGAGCACTCGGCGAATTGG
GGAACTTGTTAATGGACAAATGTGGCTGATGCAGGCGTGCCGTGTTCTTA
CCTTGGGACGAGGTGCGTGGAAGAGTGGACGACTTGATTGCCGGCTTGGT
TGGCTTCGTTTCGGCTGTAAAGACCACGCCCATTTCGGAGGCAGTGAGTT
GCAGTGGTGAGAAAGGGAAACGAATGGCTTGCATTGTGTCTAGGAAGCGT
TTCACCCACACCAATCAACCGCACTCAGAATAAAATTCGCTCTAACTTTA
ATAATCGCCACGGTTTATTATCACTTTTTTTTTGTAAATTTTCTTTCTTT
CTAGTATGCTCGTCCATGGGATTATCTCAGTTTTTGATTGATTTTTATTC
TGAGTGCAAGGCTGTACATATAAATAAATTACCGGCATGTAGGGGATTGT
GAGACTTTGGTATTCCCTGTATGTCATCGCTAAATGACACGGACTTCTCA
AAGGACACGGATTTTTCTGCAAGACAAGGACAAGACAATATGTGACGGCT
TTTCAGAGGCTGCAAAGGATTGGGCCTCCGGTTCCGGCGACACTTACGGC
ACGAGTTTTTGCCCAGCTTGGGAGCTTTCTCCCGAATGTACAGCTCATCC
CCGGAGCCGTTGGCTGCGCGGCGTGCGGAAGAGAGAACAAATTAGACATG
TAGTTAGAGGGGAGAGACCGGGTGCAAGGAGTCTGGAAGTTGGGCCATGT
CTTTAGATCTACAAAGCGGTGCTACAAGCCAAGCGAGTGCCGTGGACAAC
ATTCAGGGATTGCAGGGACTCATATTCGTACCTTGCATCTGCGACGGCAC
GACCAGATAGTTTGGGTCCAGAGTGGACACGGCCAGCGGGGCAATCTGGG
GGTTCTGGTTAACGAGGGCCTTCTGCACTAGTCCCGTCAGGTTGGCCAGC
TGCCTTTCCATGTGCTCCACACGAATCCGATGCAAGTCTTCGGGCCTGCA
AGTGTTGCGTGCTTGGCAAGCAGCGATCATTGGGCCACACATCCGCTGGC
ACCACATCGCTCCAATTGCGCAGCCAAGCCTAGGCATCCGACATCAGAGC
ATAGACACCGGAATTGGATTTGGTATCCAAGTCGAAGTCGAAGTCGAAAC
GCGGGTCGCAGCACTTAGCGCATGGGAGCGTGAACCAAAACAGCAAGAAT
GCAGCTGCATGACTGCATAAGCTGCTATTCGACTTCTTTATACCCTAACC
TGCGCTGCGCTGTGCTGTCAGGCCGCTCATCTGGTCCAATATACCCTCCG
TCTCGTTTGGCCGTTGGAGGCAGCGAAAAGTAAGTCCGTGCTAGCACGCA
ATGTCGGTGCCAATCCGCTTTCGCAGTCGACGAGTTGGAGCTGCGCAAGA
ACCACCAAGAGCTGCCCGCAAAGACATGACTACATGCAGTGTGACCAGCA
CACCAGCGCGGTTTGCCCGCTGCCTGGCTAACTTCCAGGTGGACGAGCTG
CTGCTGTTAAAGAAGTCCGTGATGAGTATGGAGGCGCTGGATAAGAACGA
TAGTCTCCAGCCGACTACGGAATGCCCACAGATGGCGCCGGATGGATCGC
CACTGCCAGAGCGAATGGCCTTGATGGCCGCAGATCGGGGTGAGCACGAC
ACCACTGGCTCCCATGGTCCCTGGCACTCCCATCCACACGCGCCGACTTC
CTGGACCGAGGAAAAGCCCTCAAAGTTGCAGACCCTATTCCAGATCAGCA
TTACGGCCCTGGCCTTTCTCTCCTTCGGCGGCTATCTACTCTGCCTAATC
GTGCAGGCCATCAAGAGCAAGGGCACCACCTACTTCCATCCGGTGGCCAC
GGCCACGACCAGCTCATCCACAAGCAATGTGAAACGCATCAAGATATACC
GCCGCAGCAAGCGCAGCTCTGTGCGCCCCGATACCGATCTGCCAACCCTG
CTGCAGCAGGACTACGCCTCCTACATGAAATCTTTGCGAGATCGCGGCTG
GGGCATGCTTACCTAGTGGGATCGTAGATCTGGTTGCCGCGATGCGTGAG
GCGGTTGGGTCCTGGTCCCACCTTTATGCCGTACAGTGCGTACTGATCCT
CTGTCATGGTTCCATCGCTGTAAATGGCAAAGATTAGTTAAGATGCTAAT
GCTACTACAACAACATCTATTCCTACTCCCCCCCTCGCACCTCTGCTCCT
CGTCGATAATGGGCGCCACCACGGCGCCCCTCGTTCCGTACTGGCTGTAG
TATGGCTCCTCGTAGTTTCCGCGGCTACTGCGCTCCGGGGAACTGGTATA
TCCATCTGCAAATACAGCCTGGTCGTTTAGAACTTGGACTCTTAATGATG
GGAGGATCGTAGCTATGTGCGTGCTTGGTAGCCTATAGTTTGTGGTTCAA
TTTAGGTATAACGAAACGCAATAAAGGAACGCAAACGAGCAATTCGAAAT
GAAAAAAAAAAAAAAAAAA
MIP13654.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:40:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32809.c | 2804 | CG32809.c | 1981..2445 | 707..243 | 2325 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1813..2277 | 707..243 | 2325 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1981..2445 | 707..243 | 2325 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 2444..2628 | 192..8 | 925 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 2276..2460 | 192..8 | 925 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 2444..2628 | 192..8 | 925 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 1604..1769 | 1697..1532 | 815 | 99.3 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1436..1601 | 1697..1532 | 815 | 99.3 | Minus |
CG32809.b | 3061 | CG32809.b | 1604..1769 | 1697..1532 | 815 | 99.3 | Minus |
CG32809.c | 2804 | CG32809.c | 1385..1500 | 3006..2891 | 580 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1217..1332 | 3006..2891 | 580 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1385..1500 | 3006..2891 | 580 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 1499..1606 | 2819..2712 | 540 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1331..1438 | 2819..2712 | 540 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1499..1606 | 2819..2712 | 540 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 1836..1919 | 1216..1133 | 420 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1668..1751 | 1216..1133 | 420 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1836..1919 | 1216..1133 | 420 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 1768..1835 | 1365..1298 | 340 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1600..1667 | 1365..1298 | 340 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1768..1835 | 1365..1298 | 340 | 100 | Minus |
CG32809.c | 2804 | CG32809.c | 1919..1982 | 865..802 | 320 | 100 | Minus |
CG32809-RB | 2636 | CG32809-RB | 1751..1814 | 865..802 | 320 | 100 | Minus |
CG32809.b | 3061 | CG32809.b | 1919..1982 | 865..802 | 320 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:38:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 1575412..1577115 | 1..1704 | 8505 | 99.9 | Plus |
chrX | 22417052 | chrX | 1577923..1578737 | 2337..3151 | 4030 | 99.6 | Plus |
chrX | 22417052 | chrX | 1577167..1577606 | 1702..2141 | 2155 | 99.3 | Plus |
chrX | 22417052 | chrX | 1577674..1577871 | 2141..2338 | 990 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:14:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1681566..1683269 | 1..1704 | 8505 | 99.9 | Plus |
X | 23542271 | X | 1684077..1684893 | 2337..3153 | 4085 | 100 | Plus |
X | 23542271 | X | 1683321..1683760 | 1702..2141 | 2200 | 100 | Plus |
X | 23542271 | X | 1683828..1684025 | 2141..2338 | 990 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 1689664..1691367 | 1..1704 | 8505 | 99.9 | Plus |
X | 23527363 | X | 1692175..1692991 | 2337..3153 | 4085 | 100 | Plus |
X | 23527363 | X | 1691419..1691858 | 1702..2141 | 2200 | 100 | Plus |
X | 23527363 | X | 1691926..1692123 | 2141..2338 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 21:38:31 has no hits.
MIP13654.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:39:46 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 1575412..1577112 | 1..1701 | 99 | -> | Plus |
chrX | 1577167..1577606 | 1702..2141 | 99 | -> | Plus |
chrX | 1577675..1577870 | 2142..2337 | 100 | -> | Plus |
chrX | 1577924..1578737 | 2338..3151 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-01 09:32:56 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RB | 1..591 | 2126..2716 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:15:03 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RB | 1..591 | 2126..2716 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:58:59 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RC | 1..666 | 2051..2716 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:37 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RC | 1..666 | 2051..2716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-01 09:32:56 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RB | 1..591 | 2126..2716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:15:03 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RB | 1..591 | 2126..2716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:59 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RC | 1..3151 | 1..3151 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:37 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14797-RC | 1..3151 | 1..3151 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1681566..1683266 | 1..1701 | 99 | -> | Plus |
X | 1683321..1683760 | 1702..2141 | 100 | -> | Plus |
X | 1683829..1684024 | 2142..2337 | 100 | -> | Plus |
X | 1684078..1684891 | 2338..3151 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1681566..1683266 | 1..1701 | 99 | -> | Plus |
X | 1683321..1683760 | 1702..2141 | 100 | -> | Plus |
X | 1683829..1684024 | 2142..2337 | 100 | -> | Plus |
X | 1684078..1684891 | 2338..3151 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:39:46 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1681566..1683266 | 1..1701 | 99 | -> | Plus |
X | 1683321..1683760 | 1702..2141 | 100 | -> | Plus |
X | 1683829..1684024 | 2142..2337 | 100 | -> | Plus |
X | 1684078..1684891 | 2338..3151 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:59 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1575599..1577299 | 1..1701 | 99 | -> | Plus |
arm_X | 1577354..1577793 | 1702..2141 | 100 | -> | Plus |
arm_X | 1577862..1578057 | 2142..2337 | 100 | -> | Plus |
arm_X | 1578111..1578924 | 2338..3151 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:05:13 Download gff for
MIP13654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1689664..1691364 | 1..1701 | 99 | -> | Plus |
X | 1691419..1691858 | 1702..2141 | 100 | -> | Plus |
X | 1691927..1692122 | 2142..2337 | 100 | -> | Plus |
X | 1692176..1692989 | 2338..3151 | 100 | | Plus |
MIP13654.hyp Sequence
Translation from 2050 to 2715
> MIP13654.hyp
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLT*
MIP13654.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14797-PC | 221 | CG14797-PC | 1..221 | 1..221 | 1150 | 100 | Plus |
CG14797-PB | 196 | CG14797-PB | 1..196 | 26..221 | 1025 | 100 | Plus |
MIP13654.pep Sequence
Translation from 2050 to 2715
> MIP13654.pep
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLT*
MIP13654.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:47:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22168-PA | 172 | GF22168-PA | 41..169 | 85..215 | 448 | 67.4 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:47:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12874-PA | 175 | GG12874-PA | 1..175 | 47..221 | 783 | 88.6 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:47:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH24533-PA | 154 | GH24533-PA | 17..142 | 81..213 | 402 | 66.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14797-PC | 221 | CG14797-PC | 1..221 | 1..221 | 1150 | 100 | Plus |
CG14797-PB | 196 | CG14797-PB | 1..196 | 26..221 | 1025 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:47:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI16498-PA | 201 | GI16498-PA | 1..190 | 26..215 | 480 | 58.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:47:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13254-PA | 236 | GA13254-PA | 35..236 | 31..221 | 663 | 64.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:47:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19160-PA | 219 | GM19160-PA | 1..219 | 1..221 | 884 | 80.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:47:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24722-PA | 221 | GD24722-PA | 1..221 | 1..221 | 1142 | 96.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:47:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16704-PA | 224 | GE16704-PA | 1..224 | 3..221 | 900 | 85.3 | Plus |