Clone MIP13659 Report

Search the DGRC for MIP13659

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:136
Well:59
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG15046-RA
Protein status:MIP13659.pep: gold
Sequenced Size:1854

Clone Sequence Records

MIP13659.complete Sequence

1854 bp assembled on 2011-11-03

GenBank Submission: BT132745.1

> MIP13659.complete
AGTTTGTTGTTTGTAGCAGCCAGTTGAGGAGCAGAAGCGACGATAGTTGG
CTTCCAATAATAATAACAACCAACATTAGCATCGAAAGCAATCGAGAGTC
GAGCAATGTTACGTCGAGGGCCAACGGGCTTCATATCCGCCCTGATCTTC
GCGAGCCTCTGTCTGGGCTTCTGTCGGGGCTACTTCAGTCTGGAGGTGGG
TGATCCCTGTCCCACGGTCAATTACCGCAGTCGCTGCCAAGCGCTGGAGG
ATTGTGAGACTCTGGCGTCGCATCTTAAAACGGGACGACTCACATTGAGG
GCGGTGATGAACTGTGGCTTCACCACGCGCAGCGAGAAGATCTGCTGTCC
CGTCGAGGATGCCCAGAGCGAGGTGCGGTTAGATCCCACGGCGGCCACCA
CCAGTACAACTACAACTACTACTACTACCAGCACAACATCTACTACTACT
TCCACCACAACCACCACTACTACCACAACTCCAGCGCCAGAACCTTGGCT
GAGCATATTCAAGACGGATCGCGATTACGTCCAGCAATCCATTGGGTCCA
CGCACCGGCCAACGAGGGAGAGCATCACCTTCAGAGACACCTCCGATGGC
GCCGACTGCACGGCTCCCCTGTACGAGGGCCAGTGTCGTGCCGTATCCGC
CTGCCCCAGTGTGGAGCCACTCCTGTCGCAGGGTCGTCTCAGGGACGAGG
ATTTCACAACGTGCCGCGAGGGAACGCACGAGGAGATCATCTGCTGTCCG
CTCAATCTGCCGCTGCAGCCACGCGTCCACACCGGCTTGCGGCTGGGTGT
CCAGGGTGATTCGTCGGAGGGCAAAGCTGCCGAGGATCCGCTAGAGCTGG
CCGCCATTGCACGGGCGGATAGGCTACTGCCACACTACCGCCATCTGGCT
TCGCTGGCACATCCGAATGCCGCCTTCGATGGCCACCTGCATCACTGTGC
CGCCCTGGTACTGACGCCCCAGCTCCTGGTCAGCGCCGCTGGCTGCGAGC
GACCAAGTCATGCTGTTTTCGGAGTGGCTGATCTGCGGGACGTTGACGCC
GACGAGGACTATCTGGCGGATATAGTGCGCCTGGTTCAATTTCAAAAGGA
TCTATCACTTATACGATTGCAGGACCCACTGCGTCTGGGCAGTCAGACCT
CCGCGAATGTGAGCGTGGCTCCCATTTGCACCCAGTTCGAGCTGACCAGG
CTGCAGCGTAGCGGCAGCCTAGTGGCCGTGGGTTGGGGCAAGGGTGAAGA
CACTGACTGTCCGCTGTTCGAGATGCCCATGCGACTGCGTCCCACATGGG
CCTGCGGGGATCTACCCAATTACGGCGGAGTTCAGGATCTGGGCAGCTCA
CATCTTTGCGTGGAGCCGATGGACGGCGAAAGGGAGCTGCAGCGGTTCTC
CAACAGCAGCACCTGCGCCGCCTGTCCGGCTTCCGTGGGCAGTGTACTCC
ATCTGGTGCGACCGGGCGGAGGTCGCTGCGTCATTGGGGTTGCCACGCCC
ACGGGGGCTGAGTGCGAGGCACGGACCATGTACTTCACGGGTCTGCTGAG
TCCGCCGTTCAGGCGGTTTGTGGAGCAGGAGCAGAAGTAGTCATCCAGGT
TAAGTTAGAACAATCTATGCAAATAATGTATAAATTGGATGAGAAGAACG
CAGAAGTGAAATTGATTTCGCAAGCATCAGCTTGTGAAATAATTGGAGCA
GCATGGTCACACTGAACACGATCTGACTGTACTTTTATGCCTAAGAATAT
ACCAGTTAACATCTACCCAAAACCTCATTGTAGTAAGTAAATTAATATAA
GAAACATTATAAATAAATTTTATATATTTATTACAAAAAAAAAAAAAAAA
AAAA

MIP13659.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18377397..18378278 1077..196 4305 99.2 Minus
chrX 22417052 chrX 18376527..18377113 1834..1248 2845 99 Minus
chrX 22417052 chrX 18378519..18378714 196..1 980 100 Minus
chrX 22417052 chrX 18377169..18377341 1249..1077 850 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18488274..18489155 1077..196 4410 100 Minus
X 23542271 X 18487402..18487990 1836..1248 2945 100 Minus
X 23542271 X 18489396..18489591 196..1 980 100 Minus
X 23542271 X 18488046..18488218 1249..1077 865 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 18496372..18497253 1077..196 4410 100 Minus
X 23527363 X 18495500..18496088 1836..1248 2945 100 Minus
X 23527363 X 18497494..18497689 196..1 980 100 Minus
X 23527363 X 18496144..18496316 1249..1077 865 100 Minus
Blast to na_te.dros performed 2019-03-15 11:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
3S18 6126 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). 3765..3872 187..81 123 60.9 Minus
Dwil\Vege 884 Dwil\Vege VEGE 884bp Derived from AF518730. 168..209 1831..1789 113 76.7 Minus

MIP13659.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:15:16 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18378070..18378277 197..404 98 <- Minus
chrX 18378519..18378714 1..196 100   Minus
chrX 18376574..18377111 1250..1787 98 <- Minus
chrX 18377169..18377340 1078..1249 99 <- Minus
chrX 18377397..18377993 481..1077 99 == Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-03 16:50:02 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 1..1485 106..1590 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:39:29 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 1..1485 106..1590 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:26:20 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 1..1485 106..1590 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-03 16:50:02 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 1..1485 106..1590 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:39:29 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 30..1817 1..1788 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:20 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
CG15046-RA 30..1817 1..1788 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:16 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
X 18488046..18488217 1078..1249 100 <- Minus
X 18487404..18487988 1250..1834 100 <- Minus
X 18488274..18489154 197..1077 100 <- Minus
X 18489396..18489591 1..196 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:16 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
X 18488046..18488217 1078..1249 100 <- Minus
X 18487404..18487988 1250..1834 100 <- Minus
X 18488274..18489154 197..1077 100 <- Minus
X 18489396..18489591 1..196 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:16 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
X 18488046..18488217 1078..1249 100 <- Minus
X 18487404..18487988 1250..1834 100 <- Minus
X 18488274..18489154 197..1077 100 <- Minus
X 18489396..18489591 1..196 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:39:29 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18381437..18382021 1250..1834 100 <- Minus
arm_X 18382079..18382250 1078..1249 100 <- Minus
arm_X 18382307..18383187 197..1077 100 <- Minus
arm_X 18383429..18383624 1..196 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:38:06 Download gff for MIP13659.complete
Subject Subject Range Query Range Percent Splice Strand
X 18495502..18496086 1250..1834 100 <- Minus
X 18496144..18496315 1078..1249 100 <- Minus
X 18496372..18497252 197..1077 100 <- Minus
X 18497494..18497689 1..196 100   Minus

MIP13659.hyp Sequence

Translation from 105 to 1589

> MIP13659.hyp
MLRRGPTGFISALIFASLCLGFCRGYFSLEVGDPCPTVNYRSRCQALEDC
ETLASHLKTGRLTLRAVMNCGFTTRSEKICCPVEDAQSEVRLDPTAATTS
TTTTTTTTSTTSTTTSTTTTTTTTTPAPEPWLSIFKTDRDYVQQSIGSTH
RPTRESITFRDTSDGADCTAPLYEGQCRAVSACPSVEPLLSQGRLRDEDF
TTCREGTHEEIICCPLNLPLQPRVHTGLRLGVQGDSSEGKAAEDPLELAA
IARADRLLPHYRHLASLAHPNAAFDGHLHHCAALVLTPQLLVSAAGCERP
SHAVFGVADLRDVDADEDYLADIVRLVQFQKDLSLIRLQDPLRLGSQTSA
NVSVAPICTQFELTRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWAC
GDLPNYGGVQDLGSSHLCVEPMDGERELQRFSNSSTCAACPASVGSVLHL
VRPGGGRCVIGVATPTGAECEARTMYFTGLLSPPFRRFVEQEQK*

MIP13659.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15046-PA 494 CG15046-PA 1..494 1..494 2617 100 Plus

MIP13659.pep Sequence

Translation from 105 to 1589

> MIP13659.pep
MLRRGPTGFISALIFASLCLGFCRGYFSLEVGDPCPTVNYRSRCQALEDC
ETLASHLKTGRLTLRAVMNCGFTTRSEKICCPVEDAQSEVRLDPTAATTS
TTTTTTTTSTTSTTTSTTTTTTTTTPAPEPWLSIFKTDRDYVQQSIGSTH
RPTRESITFRDTSDGADCTAPLYEGQCRAVSACPSVEPLLSQGRLRDEDF
TTCREGTHEEIICCPLNLPLQPRVHTGLRLGVQGDSSEGKAAEDPLELAA
IARADRLLPHYRHLASLAHPNAAFDGHLHHCAALVLTPQLLVSAAGCERP
SHAVFGVADLRDVDADEDYLADIVRLVQFQKDLSLIRLQDPLRLGSQTSA
NVSVAPICTQFELTRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWAC
GDLPNYGGVQDLGSSHLCVEPMDGERELQRFSNSSTCAACPASVGSVLHL
VRPGGGRCVIGVATPTGAECEARTMYFTGLLSPPFRRFVEQEQK*

MIP13659.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22414-PA 500 GF22414-PA 1..499 1..494 1846 72.5 Plus
Dana\GF22413-PA 329 GF22413-PA 112..329 264..491 242 30.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:32:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18118-PA 496 GG18118-PA 1..496 1..494 2201 88.1 Plus
Dere\GG18117-PA 301 GG18117-PA 26..298 195..490 235 28.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12342-PA 504 GH12342-PA 9..503 5..493 1178 51.7 Plus
Dgri\GH14606-PA 241 GH14606-PA 2..240 261..492 292 30.5 Plus
Dgri\GH12340-PA 264 GH12340-PA 97..249 339..494 156 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15046-PA 494 CG15046-PA 1..494 1..494 2617 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15590-PA 485 GI15590-PA 5..481 7..494 1213 53.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27031-PA 487 GL27031-PA 2..480 13..490 1674 69.9 Plus
Dper\GL27030-PA 351 GL27030-PA 29..343 163..492 265 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13457-PA 487 GA13457-PA 2..480 13..490 1698 70.7 Plus
Dpse\GA22319-PA 351 GA22319-PA 29..343 163..492 260 26.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22812-PA 479 GM22812-PA 1..479 1..494 2416 93.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15633-PA 304 GD15633-PA 38..273 209..470 213 27.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15196-PA 553 GJ15196-PA 78..528 10..490 1137 50.6 Plus
Dvir\GJ15193-PA 250 GJ15193-PA 4..226 263..488 237 30.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25259-PA 494 GK25259-PA 1..493 1..494 1358 58.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15524-PA 501 GE15524-PA 1..501 1..494 2246 88.2 Plus
Dyak\GE15523-PA 299 GE15523-PA 17..296 186..490 215 24 Plus