Clone MIP13735 Report

Search the DGRC for MIP13735

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:137
Well:35
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG13674-RA
Protein status:MIP13735.pep: gold
Sequenced Size:687

Clone Sequence Records

MIP13735.complete Sequence

687 bp assembled on 2009-11-04

GenBank Submission: BT100258.1

> MIP13735.complete
CTTTCTGTAGTCACTACAACCAAACACAAAAACCAATCAACAATCAACAT
GAAATTCCTCGCCGTCTGCTTCTTCGCTGTTGTGGCTGTGGCTGCTGCCA
AACCCGGTATTGTGGCTCCTCTGGCCTACACCGCTCCGGCTGTGGTGGGC
AGTGCCGCCTACGTGGCTCCCTACGCCTCCAGCTACACCGCCAACTCGGT
GGCCCACAGCGCCGCCTTCCCAGCTGCCTACACCGCCGCCTACACTGCTC
CCGTTGCTGCTGCCTATACCGCTCCAGTGGCTGCTGCTTATACCGCTCCA
GTGGCCGCTGCGTACGCCGCCCCAGCTGCCTATACCGCTGCCTACACCGC
CCCCATTGCCCGTTATGCCGCCACCCCCTTCGCAGCACCCATCGCCGCTC
CCGTGGCTGCCGCCTACACCGCCCCCATCGCCGCCGCTGCCCCAGTTCTG
CTGAAGAAGTAAGAAGTGCGATTGTGAATCCCATCTTGACCAATTTGTGT
AAATAAAGAATTGTACATACCGACGACAAGTCAAGCGTGTTTTCTTTATA
AAGAGTATACACACTAGAAAATTTTAATGATGTGGCAAAGCGTCAATAAA
ACACCAAAAAAAAACCTGGAAAATTTCTCTTAAAATAATAAAAGGTAATA
AAGGATAAAGTTTTCTTACAAAAAAAAAAAAAAAAAA

MIP13735.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG13674.a 1027 CG13674.a 407..1027 1..621 3105 100 Plus
CG13674-RA 806 CG13674-RA 186..806 1..621 3105 100 Plus
CG13679-RB 899 CG13679-RB 493..677 115..299 760 94 Plus
CG13679-RB 899 CG13679-RB 371..489 7..126 425 91.6 Plus
CG13679-RB 899 CG13679-RB 616..674 262..320 190 88.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8210196..8210824 669..58 2810 96.8 Minus
chr3L 24539361 chr3L 8194889..8195144 59..299 795 88.3 Plus
chr3L 24539361 chr3L 8214505..8214620 115..230 565 99.1 Plus
chr3L 24539361 chr3L 8210890..8210946 57..1 270 98.2 Minus
chr3L 24539361 chr3L 8195083..8195141 262..320 190 88.1 Plus
chr3L 24539361 chr3L 8210581..8210644 325..262 185 85.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8218227..8218843 674..58 3085 100 Minus
3L 28110227 3L 8202934..8203189 59..299 795 88.3 Plus
3L 28110227 3L 8222536..8222651 115..230 550 98.3 Plus
3L 28110227 3L 8218909..8218965 57..1 285 100 Minus
3L 28110227 3L 8203128..8203186 262..320 190 88.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8211327..8211943 674..58 3085 100 Minus
3L 28103327 3L 8196105..8196289 115..299 760 94 Plus
3L 28103327 3L 8215636..8215751 115..230 550 98.2 Plus
3L 28103327 3L 8212009..8212065 57..1 285 100 Minus
3L 28103327 3L 8196034..8196101 59..126 280 94.1 Plus
3L 28103327 3L 8215575..8215632 69..126 230 93.1 Plus
3L 28103327 3L 8196228..8196286 262..320 190 88.1 Plus
Blast to na_te.dros performed 2019-03-15 18:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1061..1148 340..253 134 61.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6850 341..245 127 60.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6828 340..246 124 58.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6817 341..245 118 59.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2374 311..246 116 66.7 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 2024..2065 16..57 110 79.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2778..2856 328..253 109 62 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 1553..1599 583..537 109 70.2 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 9435..9481 583..537 109 70.2 Minus

MIP13735.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:38 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8210269..8210440 442..612 98 == Minus
chr3L 8210196..8210252 613..669 98 <- Minus
chr3L 8210579..8210824 58..303 99 <- Minus
chr3L 8210890..8210946 1..57 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 14:12:51 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 1..414 49..462 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:40 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 1..414 49..462 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:46 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 1..414 49..462 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:21 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 1..414 49..462 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 14:12:51 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 19..480 1..462 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:40 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 19..480 1..462 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:46 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 19..687 1..669 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:21 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
CG13674-RA 19..687 1..669 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:38 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8218232..8218843 58..669 100 <- Minus
3L 8218909..8218965 1..57 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:38 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8218232..8218843 58..669 100 <- Minus
3L 8218909..8218965 1..57 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:38 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8218232..8218843 58..669 100 <- Minus
3L 8218909..8218965 1..57 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:46 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8211332..8211943 58..669 100 <- Minus
arm_3L 8212009..8212065 1..57 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:07:05 Download gff for MIP13735.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8211332..8211943 58..669 100 <- Minus
3L 8212009..8212065 1..57 100   Minus

MIP13735.pep Sequence

Translation from 0 to 461

> MIP13735.pep
LSVVTTTKHKNQSTINMKFLAVCFFAVVAVAAAKPGIVAPLAYTAPAVVG
SAAYVAPYASSYTANSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAYTAP
VAAAYAAPAAYTAAYTAPIARYAATPFAAPIAAPVAAAYTAPIAAAAPVL
LKK*

MIP13735.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25105-PA 132 GF25105-PA 2..62 17..73 174 80.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15497-PA 138 GH15497-PA 19..65 34..78 176 87.2 Plus
Dgri\GH15978-PA 157 GH15978-PA 18..59 34..73 167 92.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13674-PB 137 CG13674-PB 1..137 17..153 673 100 Plus
CG13674-PA 137 CG13674-PA 1..137 17..153 673 100 Plus
CG13679-PB 119 CG13679-PB 1..115 17..135 426 74.2 Plus
CG13678-PA 128 CG13678-PA 3..128 18..153 362 63.7 Plus
CG13047-PB 170 CG13047-PB 3..165 18..148 208 41.8 Plus
CG12519-PB 131 CG12519-PB 5..125 21..148 202 45 Plus
CG12519-PA 131 CG12519-PA 5..125 21..148 202 45 Plus
CG32213-PB 129 CG32213-PB 5..129 21..151 194 47.1 Plus
CG18294-PA 141 CG18294-PA 5..141 21..151 194 43.4 Plus
825-Oak-PB 129 CG32208-PB 5..129 21..151 193 47.1 Plus
Vml-PB 578 CG34333-PB 115..222 31..144 193 44.8 Plus
Vml-PA 578 CG34333-PA 115..222 31..144 193 44.8 Plus
Vml-PB 578 CG34333-PB 337..453 31..145 192 41 Plus
Vml-PA 578 CG34333-PA 337..453 31..145 192 41 Plus
Vml-PB 578 CG34333-PB 99..206 31..144 191 41.4 Plus
Vml-PB 578 CG34333-PB 107..214 31..144 191 44 Plus
Vml-PA 578 CG34333-PA 99..206 31..144 191 41.4 Plus
Vml-PA 578 CG34333-PA 107..214 31..144 191 44 Plus
CG13051-PA 83 CG13051-PA 3..79 18..101 189 53.6 Plus
CG14096-PA 122 CG14096-PA 5..120 21..131 188 48 Plus
CG14095-PA 162 CG14095-PA 5..154 21..149 188 39.3 Plus
Vml-PB 578 CG34333-PB 78..198 26..144 187 39.7 Plus
Vml-PB 578 CG34333-PB 321..428 31..144 187 40.5 Plus
Vml-PA 578 CG34333-PA 78..198 26..144 187 39.7 Plus
Vml-PA 578 CG34333-PA 321..428 31..144 187 40.5 Plus
Vml-PB 578 CG34333-PB 369..503 31..147 185 38.4 Plus
Vml-PA 578 CG34333-PA 369..503 31..147 185 38.4 Plus
CG32214-PC 116 CG32214-PC 5..116 21..151 182 43 Plus
CG32214-PB 116 CG32214-PB 5..116 21..151 182 43 Plus
Vml-PB 578 CG34333-PB 261..380 31..144 182 39.8 Plus
Vml-PB 578 CG34333-PB 305..420 31..144 182 38 Plus
Vml-PA 578 CG34333-PA 261..380 31..144 182 39.8 Plus
Vml-PA 578 CG34333-PA 305..420 31..144 182 38 Plus
CG32603-PA 345 CG32603-PA 131..259 26..152 182 41 Plus
Vml-PB 578 CG34333-PB 139..249 31..147 181 42.9 Plus
Vml-PA 578 CG34333-PA 139..249 31..147 181 42.9 Plus
Vml-PB 578 CG34333-PB 289..404 31..144 180 39.5 Plus
Vml-PA 578 CG34333-PA 289..404 31..144 180 39.5 Plus
Vml-PB 578 CG34333-PB 147..264 31..144 178 42.7 Plus
Vml-PA 578 CG34333-PA 147..264 31..144 178 42.7 Plus
CG13049-PA 181 CG13049-PA 30..134 31..149 178 40.3 Plus
Vml-PB 578 CG34333-PB 123..238 31..144 176 39.7 Plus
Vml-PA 578 CG34333-PA 123..238 31..144 176 39.7 Plus
Vml-PB 578 CG34333-PB 187..300 31..144 175 43 Plus
Vml-PA 578 CG34333-PA 187..300 31..144 175 43 Plus
Vml-PB 578 CG34333-PB 74..174 43..144 174 41.5 Plus
Vml-PB 578 CG34333-PB 353..463 31..147 174 38.7 Plus
Vml-PA 578 CG34333-PA 74..174 43..144 174 41.5 Plus
Vml-PA 578 CG34333-PA 353..463 31..147 174 38.7 Plus
CG13067-PA 79 CG13067-PA 3..78 18..115 174 47.5 Plus
CG32603-PA 345 CG32603-PA 187..292 38..145 174 40 Plus
CG13066-PB 93 CG13066-PB 2..90 17..85 172 48.3 Plus
CG45069-PB 129 CG45069-PB 1..129 17..153 172 41.7 Plus
CG45069-PA 129 CG45069-PA 1..129 17..153 172 41.7 Plus
Vml-PB 578 CG34333-PB 235..358 31..146 170 36.5 Plus
Vml-PA 578 CG34333-PA 235..358 31..146 170 36.5 Plus
CG32603-PA 345 CG32603-PA 166..293 43..152 170 39.7 Plus
Vml-PB 578 CG34333-PB 53..168 42..146 169 35.6 Plus
Vml-PA 578 CG34333-PA 53..168 42..146 169 35.6 Plus
Cpr64Ad-PB 247 CG1259-PB 22..144 27..148 168 46.6 Plus
CG32603-PA 345 CG32603-PA 179..307 21..143 165 39.6 Plus
Vml-PB 578 CG34333-PB 218..372 2..144 164 32.3 Plus
Vml-PA 578 CG34333-PA 218..372 2..144 164 32.3 Plus
CG32603-PA 345 CG32603-PA 213..328 27..147 162 36.6 Plus
CG13068-PA 109 CG13068-PA 8..106 20..116 160 50.5 Plus
CG13044-PA 155 CG13044-PA 9..152 26..147 158 37.6 Plus
Vm26Ab-PB 168 CG9046-PB 31..115 36..118 158 46 Plus
Vm26Ab-PA 168 CG9046-PA 31..115 36..118 158 46 Plus
CG34205-PA 217 CG34205-PA 19..202 13..152 158 35.3 Plus
CG11350-PC 456 CG11350-PC 1..137 17..148 158 38 Plus
CG32603-PA 345 CG32603-PA 89..225 26..152 157 37.3 Plus
CG13069-PA 97 CG13069-PA 3..93 18..119 156 46.1 Plus
CG11585-PB 342 CG11585-PB 89..226 38..146 155 37.1 Plus
Vml-PB 578 CG34333-PB 274..396 29..144 154 36.4 Plus
Vml-PA 578 CG34333-PA 274..396 29..144 154 36.4 Plus
Vm26Ab-PB 168 CG9046-PB 39..121 64..148 153 44.7 Plus
Vm26Ab-PA 168 CG9046-PA 39..121 64..148 153 44.7 Plus
Cpn-PA 842 CG4795-PA 12..136 26..150 152 39.5 Plus
Cpn-PB 864 CG4795-PB 12..136 26..150 152 39.5 Plus
CG11350-PC 456 CG11350-PC 67..180 29..142 149 43.9 Plus
Cpn-PA 842 CG4795-PA 29..146 27..148 148 36.9 Plus
Cpn-PB 864 CG4795-PB 29..146 27..148 148 36.9 Plus
Vml-PB 578 CG34333-PB 203..340 31..144 146 33.1 Plus
Vml-PA 578 CG34333-PA 203..340 31..144 146 33.1 Plus
Vm26Ab-PB 168 CG9046-PB 60..144 42..137 145 38.5 Plus
Vm26Ab-PA 168 CG9046-PA 60..144 42..137 145 38.5 Plus
CG11585-PB 342 CG11585-PB 130..250 31..146 145 34.4 Plus
CG34205-PA 217 CG34205-PA 72..209 25..150 139 37.5 Plus
CG13043-PA 148 CG13043-PA 2..140 19..149 137 37 Plus
CG14377-PB 105 CG14377-PB 1..105 17..153 135 38.1 Plus
CG14377-PA 105 CG14377-PA 1..105 17..153 135 38.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16775-PA 164 GI16775-PA 17..95 1..73 251 70.9 Plus
Dmoj\GI16628-PA 108 GI16628-PA 2..55 20..73 222 88.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22559-PA 127 GL22559-PA 1..127 17..153 217 71.9 Plus
Dper\GL22540-PA 115 GL22540-PA 2..66 17..79 151 86.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24666-PA 419 GA24666-PA 310..419 34..153 211 70.5 Plus
Dpse\GA24624-PA 115 GA24624-PA 2..66 17..79 149 84.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24957-PA 431 GM24957-PA 293..431 20..153 556 95.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12519-PA 131 GJ12519-PA 1..57 17..73 205 91.2 Plus
Dvir\GJ12884-PA 170 GJ12884-PA 38..90 21..73 192 94.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17006-PA 138 GK17006-PA 18..111 34..108 207 61.5 Plus
Dwil\GK17005-PA 138 GK17005-PA 18..111 34..108 206 61.5 Plus
Dwil\GK17009-PA 152 GK17009-PA 18..108 34..105 202 61.3 Plus
Dwil\GK17007-PA 140 GK17007-PA 18..108 34..105 195 61.3 Plus
Dwil\GK17008-PA 140 GK17008-PA 18..64 34..78 172 85.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20720-PA 136 GE20720-PA 18..62 34..73 137 86.7 Plus

MIP13735.hyp Sequence

Translation from 2 to 505

> MIP13735.hyp
FCSHYNQTQKPINNQHEIPRRLLLRCCGCGCCQTRYCGSSGLHRSGCGGQ
CRLRGSLRLQLHRQLGGPQRRLPSCLHRRLHCSRCCCLYRSSGCCLYRSS
GRCVRRPSCLYRCLHRPHCPLCRHPLRSTHRRSRGCRLHRPHRRRCPSSA
EEVRSAIVNPILTNLCK*
Sequence MIP13735.hyp has no blast hits.